Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gcfc2

Gene Name Gene ID Reads Annotation
gcfc2 ENSDARG00000079020 479 GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]










Genes with expression patterns similar to gcfc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gcfc2 ENSDARG00000079020 479 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
2. dhx9 ENSDARG00000079725 1241 1.883 - - - - 0.978 0.905 - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
3. aatkb ENSDARG00000104442 392 1.788 - - - - 0.993 - 0.795 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
4. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.748 - 0.766 - - 0.982 - - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
5. brd7 ENSDARG00000008380 3654 1.741 - - - - 0.981 - 0.760 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
6. cdan1 ENSDARG00000042261 658 1.717 - - - - 0.990 - - 0.727 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
7. cdkl5 ENSDARG00000015240 68 1.709 - 1.000 - - - 0.709 - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
8. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.692 - - - - 0.953 - 0.739 - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
9. smurf2 ENSDARG00000038067 2057 1.69 0.705 - - - 0.985 - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
10. fam49a ENSDARG00000006672 939 1.69 - - - - - 0.751 - 0.939 - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
11. slc6a1a ENSDARG00000045944 260 1.663 - 0.890 - - - - 0.773 - - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
12. psmg2 ENSDARG00000035987 1938 1.652 - - - - - - 0.759 0.893 - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
13. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.63 - - - - - - 0.727 0.903 - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
14. ints1 ENSDARG00000100419 1958 1.629 - - - - 0.926 - 0.703 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
15. RFTN1 RFTN1 140 1.624 0.711 0.913 - - - - - - -
16. ptprnb ENSDARG00000077047 2743 1.624 - - - - - - 0.715 0.909 - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
17. dscamb ENSDARG00000028118 82 1.62 - 0.889 - - - 0.731 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
18. mapk11 ENSDARG00000045836 846 1.605 - - - - - 0.707 - 0.898 - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
19. kmt2bb ENSDARG00000060697 5230 1.601 - - - - 0.839 - - 0.762 - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
20. sb:cb54 sb:cb54 475 1.592 0.891 - - - - - - 0.701 -
21. wscd2 ENSDARG00000061819 304 1.592 - 0.826 - - - 0.766 - - - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
22. sox21a ENSDARG00000031664, ENSDARG00000111842 1700 1.555 - - - - 0.708 0.847 - - - SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]
23. fra10ac1 ENSDARG00000102615 425 1.549 - - - - - 0.836 - 0.713 - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
24. SNORA7 SNORA7 100 1.534 - 0.764 - - - - 0.770 - -
25. lrrc40 ENSDARG00000017708 1156 1.533 - - - - - - 0.826 0.707 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
26. ZNF337_7 ZNF337_7 198 1.531 - 0.813 - - - - - 0.718 -
27. scrn2 ENSDARG00000043497 204 1.529 - - - - - - 0.806 0.723 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
28. ache ENSDARG00000031796 1985 1.512 - 0.713 - - - 0.799 - - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
29. sult4a1 ENSDARG00000101967 205 1.508 - - - - - 0.740 0.768 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
30. cep135 ENSDARG00000002991 164 1.508 - - - - - - 0.793 0.715 - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
31. fam211ba fam211ba 202 1.506 - - - - - 0.730 0.776 - -
32. si:ch211-288g17.3 ENSDARG00000070959 2425 1.505 - - - - - 0.750 0.755 - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
33. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 1.501 0.776 - - - - - - 0.725 - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
34. stard3nl ENSDARG00000045421 316 1.497 - - - - - 0.783 - 0.714 - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
35. TRIM46 TRIM46 73 1.492 - - - - - 0.745 0.747 - -
36. dlgap3 ENSDARG00000055459 85 1.489 - 0.741 - - - - 0.748 - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
37. acrc 242 1.489 - 0.739 - - - - 0.750 - - acidic repeat containing, transcript variant X3
38. CAMKK2 CAMKK2 184 1.489 0.768 - - - - 0.721 - - -
39. obfc1 obfc1 156 1.484 - - - - - 0.773 - 0.711 -
40. si:ch73-389b16.2 ENSDARG00000103802 340 1.483 - - - - - 0.742 0.741 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
41. tmeff1a ENSDARG00000008191 74 1.482 0.748 - - - - - 0.734 - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
42. GRIK3 ENSDARG00000077715 178 1.482 - - - - - 0.758 - 0.724 - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
43. zc3h3 ENSDARG00000090751 206 1.481 - 0.762 - - - - - 0.719 - zinc finger CCCH-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9399]
44. ebf1a 733 1.477 0.740 - - - - 0.737 - - - early B-cell factor 1a, transcript variant X4
45. kcnj1b ENSDARG00000002666 87 1.476 - - - - - 0.716 0.760 - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
46. CABZ01027547.1 CABZ01027547.1 128 1.472 - - - - - 0.748 - 0.724 -
47. CBFA2T3 ENSDARG00000079012 6799 1.465 - - - - 0.755 0.710 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
48. dync1i1 ENSDARG00000060948 554 1.462 - - - - - 0.750 0.712 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
49. pou3f3a ENSDARG00000042032 2835 1.457 - - - - - 0.717 0.740 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
50. ankrd10a ENSDARG00000037100 375 1.456 - - - - - 0.727 0.729 - - ankyrin repeat domain 10a [Source:ZFIN;Acc:ZDB-GENE-040426-700]
51. pcyt1ba ENSDARG00000058162 206 1.456 - - - - - - 0.749 0.707 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
52. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 1.451 - - - - - 0.708 0.743 - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
53. hmg20a ENSDARG00000031198 1763 1.419 - - - - - 0.706 0.713 - - high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
54. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.413 - - - - - 0.703 - 0.710 - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
55. si:dkey-57h18.2 33 1 - 1.000 - - - - - - - si:dkey-57h18.2, transcript variant X1
56. pot1 ENSDARG00000079915 42 1 - 1.000 - - - - - - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
57. si:ch211-282k23.2 ENSDARG00000093591 447 0.997 - - - - 0.997 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
58. CR933820.2 CR933820.2 152 0.993 - - - - 0.993 - - - -
59. rassf10a 417 0.993 - - - - 0.993 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
60. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.993 - - - - 0.993 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
61. slc39a13 ENSDARG00000000442 1367 0.993 - - - - 0.993 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
62. C8H1orf174 C8H1orf174 372 0.993 - - - - 0.993 - - - -
63. pcdh18a ENSDARG00000089805 1096 0.993 - - - - 0.993 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
64. tbx19 ENSDARG00000079187 133 0.993 - - - - 0.993 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
65. tmem135 ENSDARG00000069157 918 0.993 - - - - 0.993 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
66. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.993 - - - - 0.993 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
67. Mar-01 Mar-01 176 0.993 - - - - 0.993 - - - -
68. wfikkn2a ENSDARG00000013460 859 0.993 - - - - 0.993 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
69. gpr161 ENSDARG00000055659 454 0.992 - - - - 0.992 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
70. nol8 ENSDARG00000044143 425 0.992 - - - - 0.992 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
71. BX548000.3 BX548000.3 241 0.992 - - - - 0.992 - - - -
72. tuft1b ENSDARG00000071010 909 0.992 - - - - 0.992 - - - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
73. farp1 ENSDARG00000074381 406 0.992 - - - - 0.992 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
74. gpr98 gpr98 717 0.992 - - - - 0.992 - - - -
75. lrrfip2 ENSDARG00000010400 2633 0.992 - - - - 0.992 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
76. CHD6 ENSDARG00000017244 219 0.992 - - - - 0.992 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
77. invs ENSDARG00000002213 261 0.991 - - - - 0.991 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
78. minpp1a ENSDARG00000057058, ENSDARG00000110567, ENSDARG00000116432 496 0.991 - - - - 0.991 - - - - multiple inositol-polyphosphate phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-060929-1194]
79. anapc1 ENSDARG00000075687 488 0.991 - - - - 0.991 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
80. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 0.991 - - - - 0.991 - - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
81. ikbkb ENSDARG00000079123 498 0.991 - - - - 0.991 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
82. gon4l ENSDARG00000005867 982 0.991 - - - - 0.991 - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
83. esrrb ENSDARG00000100847 636 0.991 - - - - 0.991 - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
84. tpcn1 ENSDARG00000062362 563 0.991 - - - - 0.991 - - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
85. sepsecs ENSDARG00000033861 478 0.991 - - - - 0.991 - - - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
86. mettl16 ENSDARG00000055838 818 0.99 - - - - 0.990 - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
87. slc38a4 ENSDARG00000018149 2344 0.99 - - - - 0.990 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
88. zgc:111974 zgc:111974 1386 0.99 - - - - 0.990 - - - -
89. C1H3orf70 C1H3orf70 634 0.99 - - - - 0.990 - - - -
90. ccnb1 ENSDARG00000051923 3226 0.99 - - - - 0.990 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
91. gsto2 ENSDARG00000033285 583 0.99 - - - - 0.990 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
92. espn ENSDARG00000076414 343 0.99 - - - - 0.990 - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
93. frem1b ENSDARG00000062402 750 0.99 - - - - 0.990 - - - - Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]
94. her4.3 ENSDARG00000070770 613 0.99 - - - - 0.990 - - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
95. alpl ENSDARG00000015546 334 0.99 - - - - 0.990 - - - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
96. kat2a ENSDARG00000104734 802 0.989 - - - - 0.989 - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
97. myo9al1 myo9al1 1194 0.989 - - - - 0.989 - - - -
98. rybpa ENSDARG00000037773 904 0.989 - - - - 0.989 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
99. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.988 - - - - 0.988 - - - - interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
100. sh3bp5lb 1090 0.988 - - - - 0.988 - - - - SH3-binding domain protein 5-like, b

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA