Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for frem1b

Gene Name Gene ID Reads Annotation
frem1b ENSDARG00000062402 750 Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]










Genes with expression patterns similar to frem1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. frem1b ENSDARG00000062402 750 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]
2. gsto2 ENSDARG00000033285 583 1.758 - 0.763 - - 0.995 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
3. BX294434.1 ENSDARG00000061272 6493 1.747 - - - - 0.962 - 0.785 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
4. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1.726 - 0.729 - - 0.997 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
5. hspg2 ENSDARG00000076564 3440 1.663 - - - - 0.935 - 0.728 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
6. timm8b ENSDARG00000055708 7291 1.618 - - - - 0.779 - 0.839 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
7. fitm1 ENSDARG00000056464 1759 1.601 - - - - - 0.748 0.853 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
8. BX572619.3 BX572619.3 154 1.599 - - - - - 0.782 0.817 - -
9. bag2 ENSDARG00000035005 1402 1.571 - - - - - 0.786 0.785 - - BCL2 associated athanogene 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1399]
10. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 1.559 - - - - - 0.750 0.809 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
11. fbxl22 ENSDARG00000096995 1290 1.541 - - - - - - 0.826 0.715 - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
12. BX005410.1 ENSDARG00000115561 373 1.531 - - - 0.738 - - 0.793 - - si:ch211-106j24.1 [Source:NCBI gene;Acc:555478]
13. BX649282.1 ENSDARG00000105704 347 1.527 - 0.766 - - - - 0.761 - -
14. PSMG4 1007 1.526 - 0.820 - - - - 0.706 - - proteasome (prosome, macropain) assembly chaperone 4
15. zgc:110366 ENSDARG00000004167 314 1.519 0.719 - - - - 0.800 - - - zgc:110366 [Source:ZFIN;Acc:ZDB-GENE-050417-302]
16. DUSP10 ENSDARG00000052465 298 1.514 - - - - - 0.709 0.805 - - dual specificity phosphatase 10 [Source:ZFIN;Acc:ZDB-GENE-041014-271]
17. ccm2l ENSDARG00000063089 100 1.511 - - - 0.720 - 0.791 - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
18. tnw 16679 1.497 - - - - 0.705 - 0.792 - - tenascin W, transcript variant X2
19. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 1.496 - - - - - 0.710 0.786 - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
20. SCN1B SCN1B 191 1.492 - - - - - 0.705 0.787 - -
21. CR933820.2 CR933820.2 152 0.997 - - - - 0.997 - - - -
22. CHD6 ENSDARG00000017244 219 0.997 - - - - 0.997 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
23. tbx19 ENSDARG00000079187 133 0.997 - - - - 0.997 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
24. C8H1orf174 C8H1orf174 372 0.996 - - - - 0.996 - - - -
25. rassf10a 417 0.996 - - - - 0.996 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
26. gon4l ENSDARG00000005867 982 0.996 - - - - 0.996 - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
27. Mar-01 Mar-01 176 0.996 - - - - 0.996 - - - -
28. aatkb ENSDARG00000104442 392 0.996 - - - - 0.996 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
29. tmem135 ENSDARG00000069157 918 0.996 - - - - 0.996 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
30. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.996 - - - - 0.996 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
31. BX548000.3 BX548000.3 241 0.996 - - - - 0.996 - - - -
32. si:ch211-282k23.2 ENSDARG00000093591 447 0.995 - - - - 0.995 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
33. alpl ENSDARG00000015546 334 0.995 - - - - 0.995 - - - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
34. wfikkn2a ENSDARG00000013460 859 0.995 - - - - 0.995 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
35. anapc1 ENSDARG00000075687 488 0.995 - - - - 0.995 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
36. pcdh18a ENSDARG00000089805 1096 0.995 - - - - 0.995 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
37. C1H3orf70 C1H3orf70 634 0.994 - - - - 0.994 - - - -
38. nol8 ENSDARG00000044143 425 0.994 - - - - 0.994 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
39. slc38a4 ENSDARG00000018149 2344 0.994 - - - - 0.994 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
40. cdan1 ENSDARG00000042261 658 0.994 - - - - 0.994 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
41. invs ENSDARG00000002213 261 0.994 - - - - 0.994 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
42. myo9al1 myo9al1 1194 0.994 - - - - 0.994 - - - -
43. gpr161 ENSDARG00000055659 454 0.994 - - - - 0.994 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
44. tpcn1 ENSDARG00000062362 563 0.994 - - - - 0.994 - - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
45. lrrfip2 ENSDARG00000010400 2633 0.994 - - - - 0.994 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
46. esrrb ENSDARG00000100847 636 0.994 - - - - 0.994 - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
47. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 0.994 - - - - 0.994 - - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
48. ikbkb ENSDARG00000079123 498 0.994 - - - - 0.994 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
49. farp1 ENSDARG00000074381 406 0.994 - - - - 0.994 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
50. sh3bp5lb 1090 0.993 - - - - 0.993 - - - - SH3-binding domain protein 5-like, b
51. sepsecs ENSDARG00000033861 478 0.993 - - - - 0.993 - - - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
52. bnc2 ENSDARG00000069989 757 0.993 - - - - 0.993 - - - - basonuclin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5784]
53. espn ENSDARG00000076414 343 0.993 - - - - 0.993 - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
54. minpp1a ENSDARG00000057058, ENSDARG00000110567, ENSDARG00000116432 496 0.993 - - - - 0.993 - - - - multiple inositol-polyphosphate phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-060929-1194]
55. slc39a13 ENSDARG00000000442 1367 0.992 - - - - 0.992 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
56. pdcd2l ENSDARG00000002754 417 0.992 - - - - 0.992 - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
57. kat2a ENSDARG00000104734 802 0.992 - - - - 0.992 - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
58. her4.3 ENSDARG00000070770 613 0.992 - - - - 0.992 - - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
59. mettl16 ENSDARG00000055838 818 0.991 - - - - 0.991 - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
60. arhgap29b ENSDARG00000017748 812 0.991 - - - - 0.991 - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
61. gas5 279 0.991 - - - - 0.991 - - - - growth arrest-specific 5, transcript variant X4
62. smurf2 ENSDARG00000038067 2057 0.99 - - - - 0.990 - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
63. rybpa ENSDARG00000037773 904 0.99 - - - - 0.990 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
64. tmem62 ENSDARG00000053890 1233 0.99 - - - - 0.990 - - - - transmembrane protein 62 [Source:ZFIN;Acc:ZDB-GENE-040426-1837]
65. gcfc2 ENSDARG00000079020 479 0.99 - - - - 0.990 - - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
66. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.99 - - - - 0.990 - - - - interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
67. tmem176l.1 ENSDARG00000099491 860 0.99 - - - - 0.990 - - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
68. brd7 ENSDARG00000008380 3654 0.99 - - - - 0.990 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
69. CASKIN2_1 CASKIN2_1 2299 0.99 - - - - 0.990 - - - -
70. ccnb1 ENSDARG00000051923 3226 0.99 - - - - 0.990 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
71. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 0.989 - - - - 0.989 - - - - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
72. cdc14ab ENSDARG00000057016 1016 0.989 - - - - 0.989 - - - - cell division cycle 14Ab [Source:ZFIN;Acc:ZDB-GENE-070705-309]
73. setd8a 2549 0.989 - - - - 0.989 - - - - SET domain containing (lysine methyltransferase) 8a
74. cnpy1 ENSDARG00000003757 1132 0.989 - - - - 0.989 - - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
75. usf2 ENSDARG00000020228 2667 0.989 - - - - 0.989 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
76. utp3 ENSDARG00000056720 922 0.988 - - - - 0.988 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
77. znf362 znf362 869 0.988 - - - - 0.988 - - - -
78. hpca ENSDARG00000018397, ENSDARG00000110115 3866 0.988 - - - - 0.988 - - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
79. ncaph2 ENSDARG00000033757 1042 0.988 - - - - 0.988 - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
80. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.988 - - - - 0.988 - - - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
81. MTA1 ENSDARG00000007198 731 0.988 - - - - 0.988 - - - - metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
82. alx4a ENSDARG00000088332 895 0.987 - - - - 0.987 - - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
83. mbd1 mbd1 1309 0.987 - - - - 0.987 - - - -
84. adi1 ENSDARG00000020448 1402 0.987 - - - - 0.987 - - - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
85. fam129ba ENSDARG00000062970 1578 0.987 - - - - 0.987 - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
86. azi1 azi1 507 0.986 - - - - 0.986 - - - -
87. ctnnd2b ENSDARG00000003779 964 0.986 - - - - 0.986 - - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
88. zgc:111974 zgc:111974 1386 0.985 - - - - 0.985 - - - -
89. si:dkey-19e4.5 ENSDARG00000089886 2562 0.985 - - - - 0.985 - - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
90. tuft1b ENSDARG00000071010 909 0.985 - - - - 0.985 - - - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
91. gnao1a ENSDARG00000016676 8184 0.984 - - - - 0.984 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
92. gpr98 gpr98 717 0.984 - - - - 0.984 - - - -
93. fzd8a ENSDARG00000045444 802 0.984 - - - - 0.984 - - - - frizzled class receptor 8a [Source:ZFIN;Acc:ZDB-GENE-000328-3]
94. PACS1 PACS1 2061 0.983 - - - - 0.983 - - - -
95. znf143a ENSDARG00000012887 1393 0.981 - - - - 0.981 - - - - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]
96. zgc:161969 ENSDARG00000041359 898 0.981 - - - - 0.981 - - - - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
97. RBM22 ENSDARG00000010238 493 0.98 - - - - 0.980 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
98. commd8 ENSDARG00000028201 1318 0.98 - - - - 0.980 - - - - COMM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-061103-124]
99. COLGALT1 ENSDARG00000073974 5069 0.98 - - - - 0.980 - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
100. ppp1cc 2361 0.979 - - - - 0.979 - - - - protein phosphatase 1, catalytic subunit, gamma isozyme

There are 965 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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