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Results for frem1a

Gene Name Gene ID Reads Annotation
frem1a ENSDARG00000069473 1847 Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]










Genes with expression patterns similar to frem1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. frem1a ENSDARG00000069473 1847 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
2. uba5 ENSDARG00000063588 1260 2.783 - 1.000 - - - - 0.932 0.851 - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
3. cdk16_1 ENSDARG00000032072 2031 2.719 - 0.999 - - - 0.792 0.928 - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
4. and3 ENSDARG00000056873 22650 2.703 - 1.000 - - - 0.893 - 0.810 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
5. sp9 ENSDARG00000099374 2266 2.665 0.802 - - - - 0.955 0.908 - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
6. yy1b ENSDARG00000027978 2669 2.642 - - - - - - 0.896 0.835 0.911 YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
7. COL13A1 1565 2.64 - - 0.799 - - - 0.931 0.910 - collagen, type XIII, alpha 1, transcript variant X1
8. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 2.569 - - 0.717 - - 0.886 - - 0.966 hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
9. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 2.546 - - - - - 0.702 0.942 - 0.902 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
10. and1 ENSDARG00000088514 37603 1.895 - 0.996 - - - 0.899 - - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
11. rpz2 ENSDARG00000091215 765 1.884 - - - - - - 0.954 - 0.930 rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
12. zgc:92380 ENSDARG00000041339 1867 1.864 - - - - - - 0.943 0.921 - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
13. tmem181 ENSDARG00000045910 2288 1.862 - - - - - - 0.913 - 0.949 transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
14. csrp1a ENSDARG00000006603 5188 1.84 - - - - - - - 0.950 0.890 cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
15. ENSDARG00000092971 ENSDARG00000092971 563 1.839 - 0.999 - 0.840 - - - - -
16. TSC22D1 ENSDARG00000038306 517 1.824 - - - - - - 0.902 - 0.922 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
17. PDZD8 ENSDARG00000088699 844 1.819 - - - - - - 0.917 - 0.902 PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
18. PVRL4 1691 1.812 - - - - - - 0.898 - 0.914 poliovirus receptor-related 4
19. ogn 5002 1.811 - - - - - 0.894 - - 0.917 osteoglycin
20. CPAMD8 ENSDARG00000056530 3481 1.81 - - - - - 0.934 - - 0.876 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
21. mastl ENSDARG00000055566 1487 1.803 - - - - - - 0.902 - 0.901 microtubule associated serine/threonine kinase-like [Source:ZFIN;Acc:ZDB-GENE-040801-128]
22. sdc2 ENSDARG00000002731 6607 1.802 - 0.972 - - - - 0.830 - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
23. PRODH_1 PRODH_1 3400 1.791 - 0.998 - - - - 0.793 - -
24. srsf2a ENSDARG00000057484 25721 1.791 - 0.984 - - - - 0.807 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
25. slc35c2 ENSDARG00000037517, ENSDARG00000114428 3644 1.786 - - - - - - 0.887 - 0.899 solute carrier family 35 (GDP-fucose transporter), member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]
26. b3gnt3.3 ENSDARG00000093521 430 1.783 - - - - - 0.827 0.956 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
27. RBBP8NL RBBP8NL 813 1.78 - - - - - - 0.949 0.831 -
28. dusp2 ENSDARG00000098108 353 1.767 0.836 - - - - - 0.931 - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
29. CR352249.1 ENSDARG00000114701 857 1.762 - 1.000 - 0.762 - - - - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
30. atl3 ENSDARG00000004270 2806 1.758 - - - 0.837 - - 0.921 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
31. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.758 - - - - - - 0.911 - 0.847 RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
32. agk ENSDARG00000009837, ENSDARG00000113514 811 1.757 - - - - - - 0.902 0.855 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
33. rpz5 ENSDARG00000075718 1703 1.756 - - - - - - 0.920 - 0.836 rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
34. si:dkey-78a14.4 ENSDARG00000036066 17 1.753 0.899 - - - - 0.854 - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
35. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.753 - - - - - 0.905 0.848 - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
36. zic2a ENSDARG00000015554 2860 1.752 - 1.000 - - - - - 0.752 - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
37. asap2b ENSDARG00000019564 1660 1.748 - - - 0.806 - - - - 0.942 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
38. grk5 ENSDARG00000032801 490 1.746 0.822 - - - - - 0.924 - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
39. acp1 ENSDARG00000076486 3275 1.743 - - - - - - 0.899 - 0.844 acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]
40. col14a1a ENSDARG00000005762 4778 1.743 - - - - - 0.779 0.964 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
41. nrg2a ENSDARG00000077818 854 1.741 - - - 0.814 - - 0.927 - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
42. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.737 - - - - - 0.861 - - 0.876 distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
43. samd10a ENSDARG00000079978, ENSDARG00000112138 430 1.737 - - - - - 0.896 - 0.841 - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
44. abl1 ENSDARG00000035187 3553 1.732 - - - - - - 0.911 0.821 - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
45. scaf11 ENSDARG00000045885 3531 1.732 - - - - - - 0.906 0.826 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
46. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.73 - - - - - - - 0.863 0.867 TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
47. dyrk1b ENSDARG00000070187 2777 1.729 - - - - - - 0.851 0.878 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
48. vcana ENSDARG00000103515 611 1.72 - - - - - 0.781 - - 0.939 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
49. zgc:113443 359 1.72 - - - - - 0.868 - 0.852 - zgc:113443, transcript variant X3
50. WDR1 ENSDARG00000114022 7532 1.72 - 0.906 - - - - - 0.814 - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
51. coro2a ENSDARG00000005210 1479 1.719 - - - - - - - 0.867 0.852 coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
52. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.718 - - - - - 0.956 - 0.762 - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
53. myo9b ENSDARG00000077410 1956 1.716 - - - 0.852 - - - 0.864 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
54. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 1.714 0.843 - - - - - - - 0.871 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
55. ENSDARG00000058255 ENSDARG00000058255 1715 1.714 - - - 0.761 - - 0.953 - -
56. anxa11b ENSDARG00000002632 5132 1.714 - 0.993 - - - - 0.721 - - annexin A11b [Source:ZFIN;Acc:ZDB-GENE-030707-5]
57. clptm1l ENSDARG00000021048 1234 1.707 - - - - - 0.743 0.964 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
58. extl3 ENSDARG00000026811 4815 1.694 - - - - - 0.777 - - 0.917 exostosin-like glycosyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041124-2]
59. im:7150988 ENSDARG00000109310 28520 1.692 - - - - - - 0.895 - 0.797 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
60. sly1 sly1 2403 1.691 - - - 0.820 - - - 0.871 -
61. si:ch211-198d23.1 ENSDARG00000092574 104 1.689 - - - - - 0.770 0.919 - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
62. bmp2a ENSDARG00000013409 303 1.689 0.949 - - 0.740 - - - - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]
63. ICT1 356 1.688 - - - 0.778 - - 0.910 - - immature colon carcinoma transcript 1
64. pes ENSDARG00000018902 3286 1.683 - - - - - - 0.881 0.802 - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
65. unc5b ENSDARG00000033327 3432 1.683 0.758 - - - - - 0.925 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
66. ecm2 ENSDARG00000071549 1527 1.681 - - - - - 0.914 0.767 - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
67. si:ch211-51o18.2 si:ch211-51o18.2 111 1.68 - - - - - 0.768 0.912 - -
68. ERRFI1 ERRFI1 664 1.68 - - - 0.769 - - 0.911 - -
69. fam20c fam20c 603 1.679 - - - - - 0.775 - - 0.904
70. hsd11b3a hsd11b3a 1388 1.679 0.754 - - - - - 0.925 - -
71. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.679 - - - 0.842 - 0.837 - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
72. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.677 - - - - - - 0.846 0.831 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
73. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.672 - - - - - - 0.809 0.863 - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
74. cpsf2 ENSDARG00000028971 841 1.671 0.761 - - - - - 0.910 - - cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]
75. slc7a6os ENSDARG00000010596 1599 1.668 - - - 0.855 - - - 0.813 - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
76. ms4a17a.11 ENSDARG00000094809 1086 1.667 - - - - - - 0.815 - 0.852 membrane-spanning 4-domains, subfamily A, member 17A.11 [Source:ZFIN;Acc:ZDB-GENE-050417-157]
77. gigfy2 3194 1.664 - - - - - - 0.814 0.850 - GRB10 interacting GYF protein 2, transcript variant X1
78. sept9a ENSDARG00000020235 6881 1.663 - 0.854 - - - 0.809 - - - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
79. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 1.66 - - - 0.789 - - - - 0.871
80. si:dkey-87o1.2 ENSDARG00000095796 6602 1.66 - - - - - - 0.883 - 0.777 si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
81. klc2 3058 1.659 - - - - - - 0.884 - 0.775 kinesin light chain 2
82. gpr146 ENSDARG00000059610 810 1.658 - - - 0.817 - - - 0.841 - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
83. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.654 - - - 0.789 - - - - 0.865 contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
84. bambia ENSDARG00000055381 2922 1.652 0.846 - - - - 0.806 - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
85. cdc123 ENSDARG00000075025 418 1.652 - - - 0.816 - 0.836 - - - cell division cycle 123 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1680]
86. si:dkey-82i20.5 ENSDARG00000116717 2965 1.651 - - - - - - 0.874 - 0.777 si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
87. bin2b ENSDARG00000010255 2649 1.65 - - - 0.734 - - 0.916 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
88. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.647 - - - - - - 0.899 0.748 - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
89. dnm1l ENSDARG00000015006 1729 1.643 - - - 0.753 - - 0.890 - - dynamin 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-1556]
90. fermt1 ENSDARG00000052652 2394 1.64 - - - - - 0.719 0.921 - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
91. dennd5b ENSDARG00000003789 1152 1.638 - - - - - 0.729 0.909 - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
92. si:dkey-221j11.3 ENSDARG00000093304 1001 1.636 - - - 0.798 - - - - 0.838 si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
93. ap1s1 ENSDARG00000056803 3854 1.628 - - - - - 0.701 0.927 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
94. NID2 NID2 5282 1.628 - - - - - 0.871 0.757 - -
95. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 1.626 - - - - - 0.713 0.913 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
96. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.625 - - - - - 0.733 0.892 - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
97. eps8l1 1598 1.623 - - - - - 0.784 - 0.839 - eps8-like1, transcript variant X3
98. lepre1 lepre1 5346 1.62 - - - 0.714 - - - 0.906 -
99. mfn1b ENSDARG00000079219 1699 1.619 - - - - - - 0.811 - 0.808 mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
100. si:dkey-204f11.64 ENSDARG00000094695 586 1.619 - - - - - 0.762 - 0.857 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]

There are 1721 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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