Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dffa

Gene Name Gene ID Reads Annotation
dffa ENSDARG00000055770 294 DNA fragmentation factor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040718-376]










Genes with expression patterns similar to dffa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dffa ENSDARG00000055770 294 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA fragmentation factor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040718-376]
2. CABZ01064973.1 CABZ01064973.1 160 1.752 0.812 0.940 - - - - - - -
3. TOR4A TOR4A 70 1.662 0.833 - - 0.829 - - - - -
4. xiap ENSDARG00000016143, ENSDARG00000110199 621 1.656 - 0.811 - - - 0.845 - - - X-linked inhibitor of apoptosis [Source:ZFIN;Acc:ZDB-GENE-030825-7]
5. CABZ01039301.1 CABZ01039301.1 189 1.638 - 0.797 - 0.841 - - - - -
6. ssna1 ENSDARG00000101300 403 1.617 - - - 0.829 - - 0.788 - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
7. C13H20orf194 C13H20orf194 580 1.58 0.725 - - - - - 0.855 - -
8. tek ENSDARG00000028663 167 1.576 0.823 - - 0.753 - - - - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
9. egfl6 ENSDARG00000045958 335 1.561 - 0.776 - 0.785 - - - - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
10. rorab ENSDARG00000001910, ENSDARG00000109324, ENSDARG00000113275 518 1.551 0.728 - - 0.823 - - - - - RAR-related orphan receptor A, paralog b [Source:ZFIN;Acc:ZDB-GENE-040426-855]
11. si:dkey-96h14.3 si:dkey-96h14.3 355 1.537 - - - 0.748 - - 0.789 - -
12. FP102192.1 ENSDARG00000101104 32 1.535 0.833 - - - - 0.702 - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
13. dnal1 ENSDARG00000034042 339 1.522 - - - 0.767 - - 0.755 - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
14. CU915814.1 CU915814.1 245 1.517 0.787 - - - - - 0.730 - -
15. CDPF1 ENSDARG00000095705 553 1.516 - - - 0.766 - 0.750 - - - cysteine rich DPF motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33710]
16. gcshb ENSDARG00000105187 182 1.516 - 0.747 - - - - 0.769 - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
17. asl ENSDARG00000033361 295 1.504 - - - 0.780 - 0.724 - - - argininosuccinate lyase [Source:ZFIN;Acc:ZDB-GENE-040426-1152]
18. ccrn4la ccrn4la 843 1.494 - 0.776 - - - 0.718 - - -
19. hace1 ENSDARG00000062280 556 1.493 - 0.769 - 0.724 - - - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-110411-52]
20. GIT1 ENSDARG00000039489 1157 1.485 - - - 0.732 - 0.753 - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
21. pigu ENSDARG00000075530 348 1.479 - - - 0.739 - - 0.740 - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
22. pros1 ENSDARG00000068261 276 1.479 0.750 - - 0.729 - - - - - protein S [Source:ZFIN;Acc:ZDB-GENE-061013-657]
23. abcc4 ENSDARG00000058953, ENSDARG00000115375 1990 1.475 - 0.702 - - - 0.773 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-511]
24. foxp1b ENSDARG00000014181 2594 1.469 - - - - - 0.743 0.726 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
25. PHLDB3 406 1.461 - - - 0.703 - 0.758 - - - pleckstrin homology-like domain, family B, member 3, transcript variant X1
26. csrp2 ENSDARG00000011961 1003 1.461 - 0.720 - 0.741 - - - - - cysteine and glycine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1863]
27. MDC1 ENSDARG00000086764 1851 1.445 - - - - - 0.704 0.741 - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
28. lmo2 ENSDARG00000095019 1098 1.432 0.704 - - - - - 0.728 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
29. trabd ENSDARG00000010445 195 1.425 - 0.719 - - - - 0.706 - - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
30. tfcp2l1 ENSDARG00000029497 34 0.922 - 0.922 - - - - - - - transcription factor CP2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040704-58]
31. NAPA NAPA 386 0.912 - 0.912 - - - - - - -
32. si:ch73-303g23.4 si:ch73-303g23.4 386 0.895 - 0.895 - - - - - - -
33. zgc:66484 ENSDARG00000030478 167 0.89 - - - 0.890 - - - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
34. flad1 ENSDARG00000070390 604 0.881 - - - - - - 0.881 - - flavin adenine dinucleotide synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-44]
35. zgc:110191 zgc:110191 359 0.879 - - - 0.879 - - - - -
36. lipin2 2021 0.875 - - - - - 0.875 - - - lipin 2, transcript variant X2
37. nit1 ENSDARG00000070116, ENSDARG00000113610 93 0.874 0.874 - - - - - - - - nitrilase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-65]
38. kif23 ENSDARG00000014943, ENSDARG00000116561 845 0.872 - - - - - - 0.872 - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
39. irx6a ENSDARG00000034420 29 0.871 0.871 - - - - - - - - iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
40. csde1 ENSDARG00000074758 172 0.871 - - - 0.871 - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
41. PEG3_37 PEG3_37 4 0.871 0.871 - - - - - - - -
42. si:ch73-346m18.6 si:ch73-346m18.6 40 0.871 0.871 - - - - - - - -
43. GABRA2_1 ENSDARG00000113737 5 0.871 0.871 - - - - - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
44. tti1 ENSDARG00000004114 203 0.87 - - - - - - 0.870 - - TELO2 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-080819-3]
45. slc52a2 ENSDARG00000102035 57 0.868 - - - 0.868 - - - - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
46. C9H21orf33 C9H21orf33 321 0.868 - - - - - - 0.868 - -
47. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 0.864 - - - - - - 0.864 - - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
48. lypd6 ENSDARG00000004307 233 0.86 - 0.860 - - - - - - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
49. arhgap12b ENSDARG00000026482, ENSDARG00000109973 1142 0.856 - - - - - - 0.856 - - Rho GTPase activating protein 12b [Source:ZFIN;Acc:ZDB-GENE-040426-1727]
50. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 0.856 - - - 0.856 - - - - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
51. FDXACB1 ENSDARG00000095750 98 0.855 - - - 0.855 - - - - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
52. rab34a ENSDARG00000045628, ENSDARG00000113347 358 0.854 - - - - - - 0.854 - - RAB34, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041010-197]
53. SCYL1 ENSDARG00000079854 78 0.853 - - - 0.853 - - - - - SCY1-like, kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8915]
54. lmx1a ENSDARG00000020354 111 0.853 - - - 0.853 - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
55. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 0.852 - - - 0.852 - - - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
56. puf60a ENSDARG00000032175 5618 0.852 - - - - - - 0.852 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
57. zgc:110782 ENSDARG00000044544 48 0.851 0.851 - - - - - - - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
58. extl2 ENSDARG00000063191 118 0.85 - - - 0.850 - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
59. rfesd ENSDARG00000058725 339 0.85 0.850 - - - - - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
60. hk2 ENSDARG00000101482, ENSDARG00000116757 92 0.849 - - - 0.849 - - - - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
61. LRRC8A LRRC8A 406 0.849 - - - - - - 0.849 - -
62. dcp1b ENSDARG00000045484 534 0.848 - - - 0.848 - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]
63. FAM20A ENSDARG00000079486 61 0.846 - 0.846 - - - - - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
64. map2k1 ENSDARG00000007825 373 0.846 - 0.846 - - - - - - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
65. ZFAT ENSDARG00000077987 205 0.845 - - - 0.845 - - - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
66. ptpn13 ENSDARG00000103699 2866 0.845 - - - - - 0.845 - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
67. hsp90aa1.2 ENSDARG00000024746 5210 0.844 - - - - - - 0.844 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
68. myo10 ENSDARG00000017004 2191 0.844 - 0.844 - - - - - - - myosin X [Source:ZFIN;Acc:ZDB-GENE-070912-277]
69. capn7 ENSDARG00000102987 386 0.844 - - - 0.844 - - - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
70. mrpl46 ENSDARG00000016307 613 0.843 - - - - - - 0.843 - - mitochondrial ribosomal protein L46 [Source:ZFIN;Acc:ZDB-GENE-040718-224]
71. myef2 ENSDARG00000059398 6050 0.842 - - - - - 0.842 - - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
72. dip2a ENSDARG00000078058 1625 0.842 - - - - - - 0.842 - - disco-interacting protein 2 homolog A [Source:ZFIN;Acc:ZDB-GENE-091204-2]
73. fut11 ENSDARG00000102402 56 0.842 - - - 0.842 - - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
74. si:dkeyp-87a6.2 ENSDARG00000093322 18 0.841 - - - 0.841 - - - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
75. si:dkey-169i5.4 ENSDARG00000077862 511 0.841 - 0.841 - - - - - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
76. exoc5 ENSDARG00000060323 2450 0.841 - - - - - 0.841 - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
77. zgc:101130 ENSDARG00000101926 924 0.84 0.840 - - - - - - - - zgc:101130 [Source:ZFIN;Acc:ZDB-GENE-040801-72]
78. gal3st1 gal3st1 108 0.84 - - - 0.840 - - - - -
79. pih1d1 ENSDARG00000037955 301 0.84 - - - 0.840 - - - - - PIH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-147]
80. si:dkey-287i17.3 si:dkey-287i17.3 228 0.84 - - - 0.840 - - - - -
81. CT025914.2 CT025914.2 53 0.839 - - - 0.839 - - - - -
82. METTL12 METTL12 415 0.839 - - - 0.839 - - - - -
83. ptcd3 ENSDARG00000103856 2107 0.839 - - - - - - 0.839 - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
84. vldlr ENSDARG00000006257 772 0.839 - - - - - - 0.839 - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
85. ankrd44 ENSDARG00000026028 324 0.838 - 0.838 - - - - - - - ankyrin repeat domain 44 [Source:ZFIN;Acc:ZDB-GENE-070912-605]
86. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 0.838 - - - - - - 0.838 - - ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
87. gng13b ENSDARG00000037921 215 0.838 - - - 0.838 - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
88. CU462878.1 ENSDARG00000090072 352 0.837 - 0.837 - - - - - - - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
89. mamdc2b ENSDARG00000073695 26 0.837 - - - 0.837 - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
90. nif3l1 ENSDARG00000045249 28 0.836 - - - 0.836 - - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
91. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 0.835 - - - 0.835 - - - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
92. znf277 ENSDARG00000025346, ENSDARG00000113592 288 0.835 - - - 0.835 - - - - - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
93. asb4 ENSDARG00000034988 1115 0.834 - - - 0.834 - - - - - ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
94. si:ch211-250m6.8 si:ch211-250m6.8 51 0.834 - - - 0.834 - - - - -
95. erg ENSDARG00000077304 161 0.834 0.834 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-041212-40]
96. npr1a ENSDARG00000031751 517 0.834 - - - - - - 0.834 - - natriuretic peptide receptor 1a [Source:ZFIN;Acc:ZDB-GENE-060503-539]
97. sik2a ENSDARG00000079618, ENSDARG00000115529 65 0.834 - - - 0.834 - - - - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
98. zgc:165627 zgc:165627 4 0.833 0.833 - - - - - - - -
99. CT583679.2 CT583679.2 10 0.833 0.833 - - - - - - - -
100. CABZ01048021.1 CABZ01048021.1 15 0.833 0.833 - - - - - - - -

There are 981 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA