Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for depdc1a

Gene Name Gene ID Reads Annotation
depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]










Genes with expression patterns similar to depdc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
2. rab25a ENSDARG00000058800 451 3.101 - - - 0.785 - 0.808 0.778 0.730 - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
3. nedd4l ENSDARG00000060006 1669 2.402 - - - - - 0.892 0.752 0.758 - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
4. memo1 ENSDARG00000010823 1681 2.374 - - - 0.766 - 0.881 0.727 - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
5. ift57 ENSDARG00000021022 288 2.321 - - - 0.769 - 0.779 0.773 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
6. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 2.257 - - - - - 0.825 0.731 0.701 - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
7. spag1a ENSDARG00000004017 1140 1.853 - - - - - 0.854 - - 0.999 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
8. cnrip1a ENSDARG00000091683 1491 1.832 - - - - - 0.833 - - 0.999 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
9. zgc:77816 zgc:77816 800 1.813 - - - - - - 0.824 - 0.989
10. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.779 - - - - - 0.849 0.930 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
11. BX296557.2 BX296557.2 1083 1.777 - - - - - - 0.778 - 0.999
12. mier1b ENSDARG00000001447 1680 1.758 - - - - - - 0.763 - 0.995 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
13. ruvbl1 ENSDARG00000002591 2381 1.741 - - - - - 0.838 0.903 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
14. mtmr9 ENSDARG00000015860 1339 1.74 - - - - - - 0.742 - 0.998 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
15. pmepa1 ENSDARG00000039325 652 1.731 - - - - - 0.887 0.844 - - prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
16. BX957337.1 BX957337.1 1685 1.721 - - - - - 0.723 - - 0.998
17. snx12 ENSDARG00000019060 9563 1.701 - - - - - - 0.720 - 0.981 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
18. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.701 - - - - - - - 0.727 0.974 si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
19. lmbrd1 ENSDARG00000104223 924 1.69 - - - 0.771 - 0.919 - - - LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
20. man1a1 ENSDARG00000005652 877 1.676 - - - - - 0.854 0.822 - - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
21. smcr8a ENSDARG00000052818 559 1.674 - - - - - 0.862 0.812 - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
22. ITCH ITCH 1226 1.665 - 0.792 - - - - 0.873 - -
23. GANAB_2 GANAB_2 3210 1.662 - - - - - 0.830 0.832 - -
24. dhrs13l1 ENSDARG00000098746 102 1.651 - - - - - 0.876 0.775 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
25. CT030012.1 ENSDARG00000105611 154 1.648 - - - - - 0.877 0.771 - -
26. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.646 - - - - - - 0.870 0.776 - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
27. srpk1b ENSDARG00000031560 2079 1.643 - - - - - 0.824 - 0.819 - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
28. prkcbp1l ENSDARG00000011932 2714 1.642 - 0.766 - - - 0.876 - - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
29. ankfy1 ENSDARG00000061013, ENSDARG00000111387 952 1.636 - - - - - 0.899 - 0.737 - ankyrin repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041222-1]
30. nsmaf ENSDARG00000051920 474 1.63 - - - - - 0.888 0.742 - - neutral sphingomyelinase (N-SMase) activation associated factor [Source:ZFIN;Acc:ZDB-GENE-050417-342]
31. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.629 - - - - - 0.853 0.776 - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
32. adck1 ENSDARG00000062561 22 1.629 - - - - - 0.856 0.773 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
33. si:ch211-133l11.10 ENSDARG00000005626 381 1.625 - - - 0.787 - 0.838 - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
34. bmi1b ENSDARG00000013076 1020 1.614 - - - - - - 0.734 0.880 - bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
35. bmp4 ENSDARG00000019995 2038 1.613 - - - 0.713 - 0.900 - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
36. dacha ENSDARG00000010132 648 1.609 - 0.830 - - - 0.779 - - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
37. fbxo44 ENSDARG00000022623, ENSDARG00000114432 406 1.607 - - - 0.738 - - 0.869 - - F-box protein 44 [Source:ZFIN;Acc:ZDB-GENE-041212-85]
38. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.606 - - - 0.769 - 0.837 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
39. Mar-02 Mar-02 1812 1.604 - - - - - - 0.785 0.819 -
40. rcc1 ENSDARG00000037158 1165 1.604 - 0.823 - - - 0.781 - - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
41. gltpd1 gltpd1 377 1.599 - - - - - 0.837 0.762 - -
42. HELZ2_1 ENSDARG00000012600 53 1.598 - - - 0.771 - 0.827 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
43. zgc:85910 zgc:85910 299 1.598 - 0.701 - - - 0.897 - - -
44. stmn4 ENSDARG00000030106 518 1.597 - - - - - 0.802 - 0.795 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
45. pgls ENSDARG00000021233 264 1.596 - - - 0.843 - - 0.753 - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
46. FAM126B 588 1.596 - - - - - 0.834 - 0.762 - family with sequence similarity 126 member B
47. ubp1 ENSDARG00000018000 1047 1.594 - - - - 0.714 0.880 - - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
48. gnsa ENSDARG00000023766 545 1.593 - - - - - 0.748 - 0.845 - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
49. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.585 - - 0.814 - - - 0.771 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
50. arhgap5 ENSDARG00000061294 2228 1.585 - - - - - 0.769 0.816 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
51. GSG2 GSG2 1162 1.584 - - - - - 0.767 0.817 - -
52. si:ch211-194k22.8 ENSDARG00000096711 1318 1.583 - - - - - 0.802 0.781 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
53. uros ENSDARG00000027491 1147 1.58 - - - - - 0.837 0.743 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
54. CT990561.1 ENSDARG00000058284 566 1.579 - - - - - 0.806 - 0.773 - EPH receptor A5 [Source:NCBI gene;Acc:797595]
55. tapbp tapbp 70 1.578 - - - - - 0.816 0.762 - -
56. TRHDE_1 TRHDE_1 102 1.575 - - - - - - 0.790 0.785 -
57. NECAB3 ENSDARG00000074794 379 1.575 - - - 0.730 - 0.845 - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
58. CR855306.1 ENSDARG00000099475 102 1.571 - - - - - 0.770 0.801 - -
59. trappc12 ENSDARG00000060101 809 1.564 - - - - - 0.741 - 0.823 - trafficking protein particle complex 12 [Source:ZFIN;Acc:ZDB-GENE-070112-1282]
60. syt2a ENSDARG00000025206 681 1.56 - - - - - 0.778 0.782 - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
61. gxylt2 ENSDARG00000044191, ENSDARG00000114372 966 1.559 - 0.704 - - - 0.855 - - - glucoside xylosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070424-64]
62. hey1 ENSDARG00000070538 986 1.557 - - - - - 0.760 0.797 - - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
63. phf16 phf16 1116 1.557 - - - - - - 0.766 0.791 -
64. rfc5 ENSDARG00000035634 974 1.556 - - - - - - 0.793 0.763 - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
65. atl1 ENSDARG00000060481 251 1.555 - - - - - 0.802 - 0.753 - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
66. btf3l4_1 ENSDARG00000089681 1089 1.555 - 0.847 - - - - - 0.708 - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
67. C20H6orf211 C20H6orf211 529 1.553 - - - - - 0.718 0.835 - -
68. nin ENSDARG00000060298 1558 1.553 - - - - - 0.805 0.748 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
69. BX088524.2 ENSDARG00000103268 564 1.549 - - - - - 0.789 0.760 - -
70. TBC1D10B ENSDARG00000078604, ENSDARG00000114712 453 1.545 - 0.746 - - - - 0.799 - - TBC1 domain family, member 10b [Source:ZFIN;Acc:ZDB-GENE-030131-7754]
71. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.542 - - - - - 0.811 0.731 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
72. krit1 ENSDARG00000098916 431 1.539 - 0.723 - - - 0.816 - - - KRIT1, ankyrin repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-555]
73. tmem8a ENSDARG00000032795 677 1.538 - - - - - 0.715 0.823 - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
74. fam60al_1 949 1.536 - - - - - 0.818 0.718 - - family with sequence similarity 60, member A, like
75. DENND6A DENND6A 648 1.534 - - - - - 0.777 - 0.757 -
76. PAXBP1 ENSDARG00000062361 626 1.531 - - - 0.721 - 0.810 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
77. eif4enif1 ENSDARG00000016177 238 1.531 - - - 0.773 - - 0.758 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
78. CABZ01081749.1 CABZ01081749.1 637 1.529 - - - - - - 0.748 0.781 -
79. sf1 ENSDARG00000008188 5142 1.528 - - - - - 0.807 0.721 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
80. dars2 ENSDARG00000060861 137 1.527 - - - 0.772 - - 0.755 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
81. ptgs2a ENSDARG00000004539 1207 1.526 - - - - - 0.743 0.783 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
82. ppp4r2a ENSDARG00000026540 1782 1.521 - 0.722 - - - 0.799 - - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
83. lrrc47 ENSDARG00000053138 417 1.521 - - - 0.820 - 0.701 - - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
84. ppp1r15a ENSDARG00000069135 871 1.519 - - - - - 0.720 - 0.799 - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
85. yeats4 ENSDARG00000045874 1168 1.516 - - - 0.791 - - - 0.725 - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
86. slc7a6os ENSDARG00000010596 1599 1.514 - - - 0.759 - 0.755 - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
87. rad23aa ENSDARG00000020001 374 1.514 - - - - - - 0.736 0.778 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
88. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 1.511 - - - 0.716 - 0.795 - - - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
89. WDFY3 ENSDARG00000078890 2092 1.509 - 0.701 - - - 0.808 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
90. pparaa ENSDARG00000031777 216 1.507 - - - 0.739 - - 0.768 - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
91. SH2B2 ENSDARG00000090421 245 1.506 - - - - - 0.714 - 0.792 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
92. mfn2 ENSDARG00000079504 726 1.506 - - - 0.759 - - 0.747 - - mitofusin 2 [Source:ZFIN;Acc:ZDB-GENE-081105-44]
93. h2afy2_1 ENSDARG00000087897 9887 1.505 - - - - - 0.774 0.731 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
94. il13ra1 ENSDARG00000080020 443 1.502 - - - - - 0.755 0.747 - - interleukin 13 receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-103]
95. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.502 - - - 0.767 - - - 0.735 - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
96. phip ENSDARG00000015970 1080 1.501 - - - 0.782 - - 0.719 - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
97. tmem201 ENSDARG00000077307 453 1.499 - - - - - 0.770 0.729 - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
98. CABZ01081897.1 ENSDARG00000110500 253 1.496 - - - 0.776 - 0.720 - - -
99. iah1 ENSDARG00000015765 326 1.491 - - - 0.707 - 0.784 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
100. guk1a ENSDARG00000030340 517 1.484 - - - 0.721 - - 0.763 - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]

There are 2183 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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