Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ctr9

Gene Name Gene ID Reads Annotation
ctr9 ENSDARG00000009170 1265 CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]










Genes with expression patterns similar to ctr9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ctr9 ENSDARG00000009170 1265 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]
2. mrpl48 ENSDARG00000035167 1008 2.322 - 0.757 - - - - 0.703 0.862 - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
3. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 2.244 - - - - - 0.738 0.801 - 0.705 exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
4. tcf7l1b ENSDARG00000007369 2785 2.121 - - - - - - 0.716 0.701 0.704 transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
5. si:ch211-191d2.2 ENSDARG00000090836 316 1.659 - - - - - - 0.803 0.856 - si:ch211-191d2.2 [Source:ZFIN;Acc:ZDB-GENE-110407-3]
6. CLDND1 CLDND1 155 1.619 - - - - - - 0.745 0.874 -
7. tmem234 ENSDARG00000078333 488 1.614 - - - - - - 0.747 0.867 - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
8. BX511263.1_1 BX511263.1_1 368 1.604 - - - - - - 0.760 0.844 -
9. zgc:165515 ENSDARG00000116300 182 1.592 - 0.726 - - - - - 0.866 - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
10. klhl22 ENSDARG00000088807 324 1.573 - - - - - - 0.724 0.849 - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
11. rnd2 ENSDARG00000070735, ENSDARG00000114884 291 1.569 - - - - - - 0.759 0.810 - Rho family GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-177]
12. nuf2 ENSDARG00000034624 2252 1.567 - - - - - - 0.761 0.806 - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
13. plagx ENSDARG00000036855 3768 1.565 - - 0.716 - - - 0.849 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
14. med13b ENSDARG00000003910 1143 1.564 - - - - - 0.795 - 0.769 - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
15. NCBP1 585 1.563 - - - - - - 0.842 - 0.721 nuclear cap binding protein subunit 1
16. DSN1 ENSDARG00000089922 269 1.555 - - - - - - 0.707 0.848 - DSN1 homolog, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-170110-2]
17. arid2 ENSDARG00000007413 4413 1.548 - 0.759 - - - - 0.789 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
18. rbm25 rbm25 3629 1.548 - 0.752 - - - - 0.796 - -
19. erbb2ip 403 1.545 - - - - - - 0.738 0.807 - erbb2 interacting protein, transcript variant X3
20. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.542 - - - - - - 0.793 - 0.749 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
21. st3gal2 ENSDARG00000112898 370 1.541 - - - - - - 0.739 0.802 - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
22. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.528 - 0.813 - - - - 0.715 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
23. ccnt2b ENSDARG00000036510 3353 1.522 - 0.800 - - - - 0.722 - - cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
24. mcm5 ENSDARG00000019507 6407 1.521 - 0.797 - - - - - - 0.724 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
25. pax3a ENSDARG00000010192 626 1.519 - - - - - - 0.722 0.797 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
26. usp4 ENSDARG00000014770 1684 1.517 - 0.722 - - - - 0.795 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
27. efna1a ENSDARG00000030326 1692 1.512 - 0.741 - - - - - 0.771 - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
28. hnrnpub ENSDARG00000004735 16496 1.508 - - - - - - 0.782 - 0.726 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
29. sin3aa ENSDARG00000079716 580 1.503 - - - - - 0.732 - 0.771 - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
30. si:dkeyp-113d7.1 ENSDARG00000059109 2145 1.502 - - - 0.784 - - 0.718 - - si:dkeyp-113d7.1 [Source:ZFIN;Acc:ZDB-GENE-030131-755]
31. PPP1R9B PPP1R9B 855 1.502 - - - - - - 0.766 - 0.736
32. RSF1 RSF1 1242 1.499 - 0.741 - - - - - - 0.758
33. sema6a ENSDARG00000102165 1401 1.498 - - - - - - 0.766 0.732 - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
34. si:dkey-18f7.2 si:dkey-18f7.2 895 1.495 - 0.781 - - - - 0.714 - -
35. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.494 - - - - - 0.765 0.729 - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
36. ENSDARG00000023499 ENSDARG00000023499 395 1.489 - - - - - 0.712 - 0.777 -
37. rxfp2b ENSDARG00000019660 464 1.489 - 0.787 - - - - 0.702 - - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
38. tmem35 ENSDARG00000052567 5685 1.487 - 0.706 - - - - - - 0.781 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
39. kmt2d ENSDARG00000037060 1232 1.486 - - - - - - 0.728 - 0.758 lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
40. cyth1b ENSDARG00000021488 669 1.485 - - - - - - 0.734 0.751 - cytohesin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4311]
41. taf7 ENSDARG00000019572 1305 1.484 - 0.769 - - - - 0.715 - - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
42. CABZ01072954.1 CABZ01072954.1 2330 1.482 - 0.735 - - - - 0.747 - -
43. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.478 - - - - - - 0.725 - 0.753 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
44. ppm1ba ENSDARG00000001888 319 1.478 - - - - - - 0.708 0.770 - protein phosphatase, Mg2+/Mn2+ dependent, 1Ba [Source:ZFIN;Acc:ZDB-GENE-991102-16]
45. psmb7 ENSDARG00000037962 11542 1.476 - - - - - - 0.732 - 0.744 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
46. ALMS1 ENSDARG00000074779 900 1.469 - - - - - - 0.761 - 0.708 Alstrom syndrome protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4837]
47. BX005008.2 BX005008.2 708 1.469 - - - - - - - 0.753 0.716
48. slc25a47a ENSDARG00000059923 1285 1.468 - - - - - - 0.716 0.752 - solute carrier family 25, member 47a [Source:ZFIN;Acc:ZDB-GENE-060616-266]
49. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.465 - - - - - - 0.758 - 0.707 CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
50. MAP4K4 ENSDARG00000098670 4665 1.462 - - 0.723 - - 0.739 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
51. sumo3a ENSDARG00000028119 13447 1.459 - - - - - - 0.747 - 0.712 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
52. gbp ENSDARG00000040059 1939 1.459 - - - 0.735 - - 0.724 - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
53. CYTH2 ENSDARG00000028800 2349 1.456 - - - - - - 0.756 - 0.700 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
54. phldb1a ENSDARG00000061093 1637 1.45 0.722 - - - - - 0.728 - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
55. tmsb ENSDARG00000054911 6411 1.449 - 0.717 - - - - 0.732 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
56. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.449 - 0.743 - - - - 0.706 - - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
57. foxp1b ENSDARG00000014181 2594 1.442 - - - - - - 0.729 - 0.713 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
58. prnprs3 ENSDARG00000003705 1854 1.438 - 0.703 - - - - 0.735 - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
59. Sep-06 Sep-06 5465 1.435 - 0.725 - - - - - - 0.710
60. hn1b hn1b 7325 1.43 - 0.716 - - - - 0.714 - -
61. hapln1a ENSDARG00000089769 12334 1.425 - 0.715 - - - - 0.710 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
62. CREBZF ENSDARG00000089787 4261 1.419 - 0.703 - - - - - - 0.716 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
63. BX085195.1 BX085195.1 995 1.419 - 0.711 - - - - 0.708 - -
64. TRAK2 ENSDARG00000102471 2258 1.41 - - - - - 0.703 - - 0.707 trafficking protein, kinesin binding 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7496]
65. hnrnpul1 ENSDARG00000040564 6550 1.403 - - - - 0.701 - - - 0.702 heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
66. rpp14 ENSDARG00000011152 524 0.931 - - - - - - 0.931 - - ribonuclease P/MRP 14 subunit [Source:ZFIN;Acc:ZDB-GENE-050522-182]
67. ahcyl2 ENSDARG00000039343 1210 0.901 - - - - - - 0.901 - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
68. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.898 - - - - - - - 0.898 - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
69. si:ch73-257c13.2 ENSDARG00000074305 197 0.898 - - - - - - - 0.898 - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
70. nup133 ENSDARG00000010078 2373 0.895 - - - - - - - 0.895 - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
71. csrp2bp 2642 0.892 - - - - - - - 0.892 - csrp2 binding protein
72. btbd2 btbd2 1296 0.891 - - - - - - - 0.891 -
73. klf2a ENSDARG00000042667, ENSDARG00000113441 588 0.887 - - - - - - - 0.887 - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
74. rad21b ENSDARG00000035655 87 0.887 - - - - - - - 0.887 - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
75. fam175a fam175a 224 0.886 - - - - - - - 0.886 -
76. phactr3a ENSDARG00000058243 150 0.886 - - - - - - - 0.886 - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
77. hcrtr2 ENSDARG00000023722 70 0.885 - - - - - - - 0.885 - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
78. BAI1_1 BAI1_1 57 0.885 - - - - - - - 0.885 -
79. ATP6AP1L ATP6AP1L 164 0.883 - - - - - - - 0.883 -
80. Mar-09 Mar-09 126 0.883 - - - - - - - 0.883 -
81. qtrt1 ENSDARG00000043105 213 0.882 - - - - - - - 0.882 - queuine tRNA-ribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1625]
82. CR384059.2 CR384059.2 139 0.882 - - - - - - - 0.882 -
83. RAPGEF4 ENSDARG00000079872 82 0.881 - - - - - - - 0.881 - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
84. dis3l2 ENSDARG00000033259 1509 0.881 - - - - - - - 0.881 - DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
85. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 0.88 - - - - - - - 0.880 - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
86. yipf1 ENSDARG00000014474 542 0.88 - - - - - - - 0.880 - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
87. znf865 ENSDARG00000036698 15532 0.879 - - - - - - 0.879 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
88. ephb2b ENSDARG00000021539 521 0.878 - - - - - - 0.878 - - eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
89. HMGXB4_1 HMGXB4_1 1122 0.877 - - - - - - - 0.877 -
90. mgat5 ENSDARG00000071506 324 0.877 - - - - - - - 0.877 - alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-060616-238]
91. epha6 ENSDARG00000022971 52 0.877 - - - - - - - 0.877 - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
92. tfb1m ENSDARG00000040727 142 0.877 - - - - - - - 0.877 - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
93. si:ch1073-357b18.3 si:ch1073-357b18.3 87 0.876 - - - - - - - 0.876 -
94. rabl3 ENSDARG00000040959 271 0.876 - - - - - - - 0.876 - RAB, member of RAS oncogene family-like 3 [Source:ZFIN;Acc:ZDB-GENE-040808-11]
95. zgc:173577 ENSDARG00000098923 71 0.874 - - - - - - - 0.874 - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
96. kcnk13a ENSDARG00000008212 136 0.874 - - - - - - - 0.874 - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
97. si:ch211-71k14.1 ENSDARG00000087061 48 0.873 - - - - - - - 0.873 - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
98. wu:fb17g07 wu:fb17g07 10567 0.873 - - - - - - 0.873 - -
99. vegfaa ENSDARG00000103542 436 0.873 - - - - - - 0.873 - - vascular endothelial growth factor Aa [Source:ZFIN;Acc:ZDB-GENE-990415-273]
100. VPRBP VPRBP 727 0.873 - - - - - - - 0.873 -

There are 1164 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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