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Results for csde1

Gene Name Gene ID Reads Annotation
csde1 ENSDARG00000074758 172 cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]










Genes with expression patterns similar to csde1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. csde1 ENSDARG00000074758 172 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
2. prr18 ENSDARG00000093768 409 2.454 - 0.716 - 0.906 - - - 0.832 - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
3. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.883 - - - - - - 0.912 0.971 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
4. CCAR2 ENSDARG00000038302 363 1.76 - - - - - - 0.836 0.924 - cell cycle and apoptosis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-091204-207]
5. LRIF1 LRIF1 135 1.716 - - - - - - 0.859 0.857 -
6. OXSM ENSDARG00000098855 253 1.704 - - - 0.816 - - - 0.888 - 3-oxoacyl-ACP synthase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-170215-2]
7. si:ch211-229b6.1 ENSDARG00000093422 151 1.698 - - - - - 0.784 - 0.914 - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
8. nom1 ENSDARG00000060027, ENSDARG00000112720 831 1.688 - 0.759 - - - - - 0.929 - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
9. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 1.688 - - - - - - 0.943 0.745 - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
10. deptor ENSDARG00000040930 191 1.68 - - - 0.907 - - 0.773 - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
11. LENG9 ENSDARG00000062374, ENSDARG00000111560 182 1.671 - - - - - - 0.741 0.930 - leukocyte receptor cluster (LRC) member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-607]
12. lipt1 ENSDARG00000025233 385 1.664 - - - 0.889 - - - 0.775 - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
13. gng8 ENSDARG00000042970 117 1.655 - - - - - 0.722 - 0.933 - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
14. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 1.645 - - - 0.862 - - - 0.783 - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
15. TULP1_1 TULP1_1 260 1.638 - 0.730 - 0.908 - - - - -
16. CD93 CD93 270 1.636 - 0.710 - - - - - 0.926 -
17. KRT9 KRT9 7 1.633 - - - - - 0.721 0.912 - -
18. mamdc1 mamdc1 156 1.622 - - - 0.767 - - 0.855 - -
19. fdx1l 461 1.616 - - - - - - 0.717 0.899 - ferredoxin 1-like
20. BX321921.1 BX321921.1 525 1.604 - - - 0.827 - - 0.777 - -
21. slc35b2 ENSDARG00000007886 310 1.549 - - - - - - 0.779 0.770 - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 [Source:ZFIN;Acc:ZDB-GENE-050213-1]
22. tmem194b tmem194b 724 1.547 - - - 0.796 - - 0.751 - -
23. lrrc8db ENSDARG00000103840 606 1.54 - - - 0.828 - - - 0.712 - leucine rich repeat containing 8 VRAC subunit Db [Source:ZFIN;Acc:ZDB-GENE-061013-487]
24. vamp4 ENSDARG00000043510 595 1.532 - - - - - - 0.728 0.804 - vesicle-associated membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-92]
25. mst1ra ENSDARG00000060235 78 1.527 - - - - - 0.734 0.793 - - macrophage stimulating 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-071218-2]
26. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 1.498 - 0.708 - - - - - 0.790 - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
27. SNORD35 SNORD35 245 1.484 - 0.735 - - - 0.749 - - -
28. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.448 - 0.708 - - - - 0.740 - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
29. slc52a2 ENSDARG00000102035 57 0.991 - - - 0.991 - - - - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
30. CT025914.2 CT025914.2 53 0.985 - - - 0.985 - - - - -
31. si:dkeyp-87a6.2 ENSDARG00000093322 18 0.985 - - - 0.985 - - - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
32. lmx1a ENSDARG00000020354 111 0.984 - - - 0.984 - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
33. mamdc2b ENSDARG00000073695 26 0.983 - - - 0.983 - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
34. CABZ01086354.1_1 CABZ01086354.1_1 89 0.982 - - - 0.982 - - - - -
35. nif3l1 ENSDARG00000045249 28 0.981 - - - 0.981 - - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
36. capn7 ENSDARG00000102987 386 0.98 - - - 0.980 - - - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
37. gng13b ENSDARG00000037921 215 0.98 - - - 0.980 - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
38. sik2a ENSDARG00000079618, ENSDARG00000115529 65 0.98 - - - 0.980 - - - - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
39. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 0.98 - - - 0.980 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
40. si:ch211-117n7.8 si:ch211-117n7.8 83 0.979 - - - - - - - 0.979 -
41. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 0.979 - - - 0.979 - - - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
42. kcnh6 kcnh6 59 0.977 - - - 0.977 - - - - -
43. ZFAT ENSDARG00000077987 205 0.977 - - - 0.977 - - - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
44. zgc:103625 ENSDARG00000038770 17 0.977 - - - - - - - 0.977 - zgc:103625 [Source:ZFIN;Acc:ZDB-GENE-040912-116]
45. dlec1 ENSDARG00000075825 60 0.977 - - - 0.977 - - - - - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
46. med11 ENSDARG00000086416 13 0.975 - - - - - - - 0.975 - mediator complex subunit 11 [Source:ZFIN;Acc:ZDB-GENE-091207-2]
47. arr3a ENSDARG00000056511, ENSDARG00000114648 192 0.975 - - - - - - - 0.975 - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
48. tph1a ENSDARG00000029432, ENSDARG00000114918 24 0.975 - - - - - - - 0.975 - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
49. ETV3L ETV3L 67 0.975 - - - - - - - 0.975 -
50. rcv1 rcv1 77 0.975 - - - - - - - 0.975 -
51. si:ch211-133l5.5 si:ch211-133l5.5 123 0.975 - - - - - - - 0.975 -
52. gnb3b ENSDARG00000002696 46 0.975 - - - - - - - 0.975 - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
53. RCVRN_1 RCVRN_1 46 0.975 - - - - - - - 0.975 -
54. gngt2b ENSDARG00000103543 132 0.975 - - - - - - - 0.975 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
55. hk2 ENSDARG00000101482, ENSDARG00000116757 92 0.974 - - - 0.974 - - - - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
56. slc6a2 ENSDARG00000016141 49 0.974 - - - - - - - 0.974 - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
57. si:ch211-250m6.8 si:ch211-250m6.8 51 0.974 - - - 0.974 - - - - -
58. FAIM2 FAIM2 43 0.974 - - - - - - - 0.974 -
59. si:ch211-274p24.5 si:ch211-274p24.5 122 0.974 - - - 0.974 - - - - -
60. nrgna ENSDARG00000039626 50 0.973 - - - - - - - 0.973 - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
61. CU207301.10 CU207301.10 67 0.973 - - - 0.973 - - - - -
62. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 0.972 - - - - - - - 0.972 - retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
63. sagb ENSDARG00000038378 28 0.972 - - - - - - - 0.972 - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
64. pth2r ENSDARG00000006678, ENSDARG00000112414 46 0.971 - - - - - - - 0.971 - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
65. faimb ENSDARG00000020814 21 0.971 - - - - - - - 0.971 - Fas apoptotic inhibitory molecule b [Source:ZFIN;Acc:ZDB-GENE-040718-91]
66. TULP1 TULP1 50 0.971 - - - - - - - 0.971 -
67. fut11 ENSDARG00000102402 56 0.97 - - - 0.970 - - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
68. CDH12_1 CDH12_1 57 0.97 - - - - - - - 0.970 -
69. extl2 ENSDARG00000063191 118 0.969 - - - 0.969 - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
70. RGS9BP ENSDARG00000086756 65 0.969 - - - - - - - 0.969 - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
71. kcnf1a ENSDARG00000027940 155 0.969 - - - 0.969 - - - - - potassium voltage-gated channel, subfamily F, member 1a [Source:ZFIN;Acc:ZDB-GENE-041001-217]
72. ptprdb ENSDARG00000019945 48 0.969 - - - - - - - 0.969 - protein tyrosine phosphatase, receptor type, D, b [Source:ZFIN;Acc:ZDB-GENE-070615-38]
73. ldhbb ENSDARG00000071076 31 0.969 - - - - - - - 0.969 - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
74. LRRC4C ENSDARG00000113411 36 0.968 - - - - - - - 0.968 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
75. si:ch211-191a16.3 si:ch211-191a16.3 31 0.968 - - - - - - - 0.968 -
76. arl3l2 ENSDARG00000015404 39 0.968 - - - - - - - 0.968 - ADP-ribosylation factor-like 3, like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1678]
77. asic1b ENSDARG00000101866 61 0.968 - - - 0.968 - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
78. tecra ENSDARG00000101585 609 0.968 - - - 0.968 - - - - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
79. tmem196b ENSDARG00000090140 20 0.967 - - - - - - - 0.967 - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
80. gnai3 ENSDARG00000030644 29 0.967 - - - - - - - 0.967 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
81. napgl napgl 39 0.967 - - - - - - - 0.967 -
82. CNST CNST 540 0.966 - - - 0.966 - - - - -
83. si:ch211-134c9.2 ENSDARG00000095593 86 0.965 - - - - - - - 0.965 - si:ch211-134c9.2 [Source:ZFIN;Acc:ZDB-GENE-090312-73]
84. abcg1 ENSDARG00000063475 97 0.965 - - - - - - - 0.965 - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
85. zgc:66484 ENSDARG00000030478 167 0.965 - - - 0.965 - - - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
86. CYSTM1 CYSTM1 176 0.964 - - - - - - - 0.964 -
87. saga ENSDARG00000012610 63 0.963 - - - - - - - 0.963 - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
88. CABZ01063556.1 ENSDARG00000116344 319 0.963 - - - - - - - 0.963 - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
89. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 0.963 - - - 0.963 - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
90. si:dkey-240h12.4 ENSDARG00000034210 114 0.963 - - - - - - - 0.963 - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
91. ponzr2 ENSDARG00000088539, ENSDARG00000113036 163 0.961 - - - - - - - 0.961 - plac8 onzin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-050411-41]
92. crim1 ENSDARG00000029668 118 0.961 - - - - - - - 0.961 - cysteine rich transmembrane BMP regulator 1 (chordin-like) [Source:ZFIN;Acc:ZDB-GENE-040312-2]
93. si:ch211-136m16.8 ENSDARG00000090767 91 0.96 - - - 0.960 - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
94. ptpn6 ENSDARG00000089043 168 0.96 - - - - - - - 0.960 - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
95. muc13a ENSDARG00000069559 985 0.96 - - - - - - - 0.960 - mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
96. CABZ01054405.1 CABZ01054405.1 115 0.96 - - - - - - - 0.960 -
97. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 0.959 - - - 0.959 - - - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
98. gal3st1 gal3st1 108 0.959 - - - 0.959 - - - - -
99. wdr78 ENSDARG00000044400, ENSDARG00000109570 48 0.959 - - - - - - - 0.959 - WD repeat domain 78 [Source:ZFIN;Acc:ZDB-GENE-050522-322]
100. FRRS1 FRRS1 80 0.958 - - - - - - - 0.958 -

There are 1049 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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