Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cnep1r1

Gene Name Gene ID Reads Annotation
cnep1r1 ENSDARG00000036064 1440 CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]










Genes with expression patterns similar to cnep1r1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cnep1r1 ENSDARG00000036064 1440 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
2. fbxw8 ENSDARG00000079089 571 2.228 - - 0.798 0.719 - - - 0.711 - F-box and WD repeat domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-080204-111]
3. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 2.158 - 0.711 0.725 - - - 0.722 - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
4. ddx1 ENSDARG00000032117 1295 1.817 - - - - 0.974 - - 0.843 - DEAD (Asp-Glu-Ala-Asp) box helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-215]
5. zgc:171497 ENSDARG00000100614 1040 1.754 - - 0.852 - - - - 0.902 - zgc:171497 [Source:ZFIN;Acc:ZDB-GENE-080220-58]
6. nrgna ENSDARG00000039626 50 1.747 - 0.794 - - - - - 0.953 - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
7. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.746 - - 0.776 - 0.970 - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
8. exoc3l4 ENSDARG00000058180 923 1.714 - - - 0.729 0.985 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
9. hccs hccs 1758 1.703 - - 0.723 - 0.980 - - - -
10. C21HXorf40A C21HXorf40A 216 1.7 - 0.746 - - - - - 0.954 -
11. ndufa11 ENSDARG00000042777 2757 1.699 - - 0.731 - 0.968 - - - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
12. srgap1 srgap1 2320 1.697 - - 0.728 - 0.969 - - - -
13. CCAR2 ENSDARG00000038302 363 1.695 - 0.778 - - - - - 0.917 - cell cycle and apoptosis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-091204-207]
14. glb1l ENSDARG00000029955 736 1.686 - - 0.783 - - - - 0.903 - galactosidase, beta 1-like [Source:ZFIN;Acc:ZDB-GENE-050309-196]
15. aatf ENSDARG00000025467, ENSDARG00000109548 796 1.683 - 0.702 - - 0.981 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
16. CT030046.1 CT030046.1 190 1.676 - 0.794 - - - - - 0.882 -
17. nol9 ENSDARG00000077751 2471 1.673 - - - - 0.947 - 0.726 - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
18. styk1 1199 1.664 - - 0.764 - - - - 0.900 - serine/threonine/tyrosine kinase 1
19. SLC5A8 ENSDARG00000087120 60 1.659 - 0.751 - - - - - 0.908 - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
20. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.653 - - - - 0.946 0.707 - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
21. gab1 ENSDARG00000037018 1489 1.652 - - 0.718 - - - - 0.934 - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
22. dnajc27 ENSDARG00000070916 530 1.648 - - - 0.805 - - - 0.843 - DnaJ (Hsp40) homolog, subfamily C, member 27 [Source:ZFIN;Acc:ZDB-GENE-081022-93]
23. si:dkey-247i3.3 si:dkey-247i3.3 297 1.644 - 0.720 - - - - - 0.924 -
24. vps72 1164 1.638 - 0.809 0.829 - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
25. marcksa ENSDARG00000004049 2518 1.637 - - 0.703 - 0.934 - - - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
26. arhgap10 ENSDARG00000078326 994 1.634 - 0.841 - 0.793 - - - - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
27. casp9 ENSDARG00000004325 306 1.624 - - - 0.714 - - - 0.910 - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
28. rgs17 ENSDARG00000039435 590 1.624 - 0.782 0.842 - - - - - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
29. pelo ENSDARG00000055477 1927 1.621 - - 0.858 0.763 - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
30. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 1.619 - 0.811 - 0.808 - - - - - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
31. foxd2 ENSDARG00000058133 1150 1.604 - 0.730 - - - - - 0.874 - forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
32. med31 ENSDARG00000008020 4161 1.604 - - 0.787 - - - 0.817 - - mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
33. TRAK1 212 1.591 - 0.751 0.840 - - - - - - trafficking protein, kinesin binding 1, transcript variant X6
34. polr2gl ENSDARG00000056127 1771 1.589 - 0.719 0.870 - - - - - - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
35. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.588 - 0.740 0.848 - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
36. zgc:194275 ENSDARG00000074014 130 1.587 - 0.856 - 0.731 - - - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
37. CCDC30 ENSDARG00000056961 178 1.586 - 0.747 - - - - - 0.839 - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
38. fstl1a ENSDARG00000015559 1687 1.582 - - 0.829 0.753 - - - - - follistatin-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4148]
39. rbm5 ENSDARG00000098280 396 1.576 - - 0.834 0.742 - - - - - RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
40. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 1.575 - 0.789 - - - - - 0.786 - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
41. mmp14a ENSDARG00000002235 911 1.572 - - 0.846 0.726 - - - - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
42. SLC10A7 ENSDARG00000104508 996 1.569 - 0.746 - - - - - 0.823 - solute carrier family 10, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-5]
43. cep55l ENSDARG00000102349 604 1.559 - 0.812 - - - - - 0.747 - centrosomal protein 55 like [Source:ZFIN;Acc:ZDB-GENE-050522-222]
44. nr1d2a ENSDARG00000003820 452 1.538 - - - - - - 0.742 0.796 - nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]
45. polr1d ENSDARG00000037570 860 1.537 - 0.788 0.749 - - - - - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
46. si:dkey-184p9.7 ENSDARG00000092726 2679 1.536 - - 0.736 - - - - 0.800 - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
47. cnp ENSDARG00000070822 649 1.528 - 0.764 - - - - 0.764 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
48. fzd2 ENSDARG00000054438 585 1.527 - - 0.824 0.703 - - - - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]
49. srfa ENSDARG00000053918 1773 1.527 - 0.815 - 0.712 - - - - - serum response factor a [Source:ZFIN;Acc:ZDB-GENE-990714-29]
50. pkd2 ENSDARG00000014098 2384 1.499 - - 0.778 - - 0.721 - - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
51. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 1.487 - - - 0.711 - - 0.776 - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
52. cep85l ENSDARG00000020777 1121 1.48 - 0.756 - - - 0.724 - - - centrosomal protein 85, like [Source:ZFIN;Acc:ZDB-GENE-041014-309]
53. larsb ENSDARG00000019280 3924 1.479 - - 0.732 - - 0.747 - - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
54. cryzl1 ENSDARG00000026902 401 1.468 - - - 0.761 - - - 0.707 - crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
55. PRIMA1 PRIMA1 459 1.45 - 0.702 - 0.748 - - - - -
56. guf1 ENSDARG00000029088 231 1.449 - 0.721 - - - - 0.728 - - GUF1 homolog, GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-4289]
57. tamm41 ENSDARG00000100157 1116 1.447 0.703 - - 0.744 - - - - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
58. tead3a ENSDARG00000074321 2240 1.425 - - 0.716 - - 0.709 - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
59. cdk12 ENSDARG00000063726 1220 1.418 - 0.715 - 0.703 - - - - - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
60. usp16 ENSDARG00000060633 684 0.991 - - - - 0.991 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
61. gorab ENSDARG00000042031 483 0.99 - - - - 0.990 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
62. ccdc28b ENSDARG00000011222 528 0.989 - - - - 0.989 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
63. ccr10 ENSDARG00000040643 255 0.989 - - - - 0.989 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
64. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.989 - - - - 0.989 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
65. pfkpb ENSDARG00000012801 223 0.989 - - - - 0.989 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
66. FOXL2 239 0.988 - - - - 0.988 - - - - forkhead box L2, transcript variant X1
67. lig4 ENSDARG00000060620 369 0.988 - - - - 0.988 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
68. nefma ENSDARG00000021351 790 0.988 - - - - 0.988 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
69. spag7 ENSDARG00000011555 3224 0.988 - - - - 0.988 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
70. myl2b ENSDARG00000053424 226 0.988 - - - - 0.988 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
71. mnat1 ENSDARG00000002077 287 0.988 - - - - 0.988 - - - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
72. cuedc2 ENSDARG00000039365 484 0.988 - - - - 0.988 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
73. ago4 ENSDARG00000100854 496 0.988 - - - - 0.988 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
74. ercc6 ENSDARG00000075612 1175 0.988 - - - - 0.988 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
75. slc2a15b ENSDARG00000053269 899 0.988 - - - - 0.988 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
76. dopey1 438 0.988 - - - - 0.988 - - - - dopey family member 1, transcript variant X4
77. fam193b ENSDARG00000102831 442 0.988 - - - - 0.988 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
78. bmi1a ENSDARG00000006010 2061 0.987 - - - - 0.987 - - - - bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
79. aspg ENSDARG00000052942 1406 0.987 - - - - 0.987 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
80. CR759921.2 CR759921.2 583 0.987 - - - - 0.987 - - - -
81. med13b ENSDARG00000003910 1143 0.987 - - - - 0.987 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
82. lgi1a ENSDARG00000020493 1218 0.987 - - - - 0.987 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
83. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.987 - - - - 0.987 - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
84. BX005008.2 BX005008.2 708 0.987 - - - - 0.987 - - - -
85. MANBAL ENSDARG00000059853 636 0.987 - - - - 0.987 - - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
86. katnbl1 ENSDARG00000042522 1086 0.987 - - - - 0.987 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
87. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.987 - - - - 0.987 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
88. larp7 ENSDARG00000017315 1194 0.986 - - - - 0.986 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
89. TRAPPC10 ENSDARG00000098118 954 0.986 - - - - 0.986 - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
90. smurf1 ENSDARG00000016086 878 0.986 - - - - 0.986 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
91. tmem88a ENSDARG00000056920 536 0.986 - - - - 0.986 - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
92. fut8 fut8 652 0.986 - - - - 0.986 - - - -
93. larp4b ENSDARG00000062146 1601 0.986 - - - - 0.986 - - - - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
94. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.986 - - - - 0.986 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
95. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.985 - - - - 0.985 - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
96. CU633999.1 ENSDARG00000098197 2880 0.985 - - - - 0.985 - - - -
97. TUSC5_1 TUSC5_1 320 0.985 - - - - 0.985 - - - -
98. bloc1s3 ENSDARG00000068828 502 0.985 - - - - 0.985 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
99. aldh16a1 ENSDARG00000037935 617 0.985 - - - - 0.985 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
100. atxn7l3 ENSDARG00000029331 531 0.985 - - - - 0.985 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]

There are 1713 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA