Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdh5

Gene Name Gene ID Reads Annotation
cdh5 ENSDARG00000075549 2288 cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]










Genes with expression patterns similar to cdh5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh5 ENSDARG00000075549 2288 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
2. srgn ENSDARG00000077069 612 2.588 - - - - - 0.904 0.887 0.797 - serglycin [Source:ZFIN;Acc:ZDB-GENE-030131-7127]
3. lmo2 ENSDARG00000095019 1098 2.536 0.858 - - - - - 0.929 0.749 - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
4. mrc1a ENSDARG00000102100 1260 2.52 0.924 - - - - 0.740 0.856 - - mannose receptor, C type 1a [Source:ZFIN;Acc:ZDB-GENE-090915-4]
5. vsg1 1870 2.515 0.912 - - - - 0.726 0.877 - - vessel-specific 1
6. prcp ENSDARG00000037883 473 2.46 0.815 - - - - 0.761 0.884 - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
7. stab1 ENSDARG00000076484 717 2.429 0.783 - - - - 0.710 0.936 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
8. pus7 ENSDARG00000031774 195 2.368 0.862 - - - - - 0.723 0.783 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
9. CABZ01018247.1 CABZ01018247.1 609 1.848 0.935 - - - - - 0.913 - -
10. gpr182 ENSDARG00000036616 455 1.807 0.939 - - - - - 0.868 - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
11. clec14a ENSDARG00000103533 718 1.799 0.951 - - - - - 0.848 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
12. tie1 ENSDARG00000004105 400 1.781 0.886 - - - - - 0.895 - - tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-990415-55]
13. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 1.766 0.919 - - - - - 0.847 - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
14. fli1a ENSDARG00000054632 330 1.752 0.883 - - - - - 0.869 - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
15. exoc3l2a ENSDARG00000008414 227 1.752 0.869 - - - - - 0.883 - - exocyst complex component 3-like 2a [Source:ZFIN;Acc:ZDB-GENE-060526-343]
16. sox18 ENSDARG00000058598 678 1.733 0.882 - - - - - 0.851 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
17. noc4l ENSDARG00000045565 1337 1.699 - 0.999 - - - - 0.700 - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
18. si:dkey-261h17.1 ENSDARG00000095268 11403 1.69 0.832 - - - - - 0.858 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
19. egfl7 ENSDARG00000100657 776 1.666 - - - - - 0.763 0.903 - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
20. CR376783.1 ENSDARG00000074235 259 1.652 0.712 - - - - - 0.940 - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
21. tmem161b ENSDARG00000055989 680 1.644 - - - - - - 0.857 0.787 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
22. NDNF ENSDARG00000062936 7287 1.637 0.800 - - - - - 0.837 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
23. col4a1 ENSDARG00000055009 3083 1.622 - - - - - 0.790 0.832 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
24. shank3b ENSDARG00000063054 148 1.609 0.834 - - - - - 0.775 - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
25. si:dkey-100h21.2 si:dkey-100h21.2 30 1.601 0.823 - - - - - - 0.778 -
26. CU915814.1 CU915814.1 245 1.587 0.863 - - - - - 0.724 - -
27. tek ENSDARG00000028663 167 1.585 0.847 - - - - - 0.738 - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
28. tmem176 ENSDARG00000078659 611 1.566 0.740 - - - - - 0.826 - - transmembrane protein 176 [Source:ZFIN;Acc:ZDB-GENE-080902-2]
29. FGD5 FGD5 250 1.565 0.850 - - - - - 0.715 - -
30. aqp8b_1 ENSDARG00000089749 586 1.558 0.771 - - - - - 0.787 - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
31. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 1.549 0.845 - - - - - 0.704 - - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
32. myct1 myct1 217 1.548 0.821 - - - - - 0.727 - -
33. WIZ WIZ 1188 1.547 0.754 - - - - - 0.793 - -
34. kcnj13 ENSDARG00000043443 700 1.544 - - - - - - 0.815 0.729 - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
35. si:ch73-334d15.2 ENSDARG00000087020 441 1.541 0.752 - - - - - 0.789 - - si:ch73-334d15.2 [Source:ZFIN;Acc:ZDB-GENE-091204-158]
36. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.526 - - - - - 0.724 - 0.802 - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
37. mpx ENSDARG00000019521 562 1.526 0.823 - - - - - 0.703 - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
38. slc6a6a ENSDARG00000012534 183 1.522 - - - - - - 0.752 0.770 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
39. ponzr1 ENSDARG00000090444 540 1.514 - - - - - - 0.811 0.703 - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
40. ccm2l ENSDARG00000063089 100 1.502 0.739 - - - - - 0.763 - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
41. hmga2 ENSDARG00000069912 20402 1.495 - - - - - 0.735 0.760 - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
42. timm10 ENSDARG00000069116 4459 1.494 - - - - - - 0.712 0.782 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
43. snai1b ENSDARG00000046019 886 1.486 0.762 - - - - - - 0.724 - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
44. foxj1b ENSDARG00000088290 343 1.483 - - - - - 0.721 0.762 - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
45. IPP ENSDARG00000075339 194 1.474 0.726 - - - - - - 0.748 - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
46. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.455 - - - - - 0.724 0.731 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
47. ecscr ENSDARG00000087457 319 1.44 0.731 - - - - 0.709 - - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
48. trim45 ENSDARG00000076781 578 1.413 - - - - - - 0.701 0.712 - tripartite motif containing 45 [Source:ZFIN;Acc:ZDB-GENE-070912-389]
49. hoxc1a ENSDARG00000070337 1460 0.999 - 0.999 - - - - - - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
50. rnaseh2a ENSDARG00000018891 1979 0.999 - 0.999 - - - - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
51. PRR5L PRR5L 408 0.999 - 0.999 - - - - - - -
52. commd5 ENSDARG00000029660 517 0.999 - 0.999 - - - - - - - COMM domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040801-71]
53. txndc12 ENSDARG00000038980 795 0.999 - 0.999 - - - - - - - thioredoxin domain containing 12 (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-050522-497]
54. mt-nd6 ENSDARG00000063922 788 0.999 - 0.999 - - - - - - - NADH dehydrogenase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-13]
55. B3GNT2 B3GNT2 348 0.999 - 0.999 - - - - - - -
56. cnppd1 ENSDARG00000027078 3778 0.999 - 0.999 - - - - - - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
57. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 0.999 - 0.999 - - - - - - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
58. mob3a ENSDARG00000019113 2551 0.999 - 0.999 - - - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
59. DENND4B ENSDARG00000102914 1001 0.999 - 0.999 - - - - - - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
60. GRAMD1C ENSDARG00000076238 795 0.999 - 0.999 - - - - - - - GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
61. elnb ENSDARG00000069017 744 0.999 - 0.999 - - - - - - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
62. pus10 ENSDARG00000079973 637 0.999 - 0.999 - - - - - - - pseudouridylate synthase 10 [Source:ZFIN;Acc:ZDB-GENE-080204-5]
63. twf2a ENSDARG00000094792 687 0.999 - 0.999 - - - - - - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
64. oraov1 497 0.999 - 0.999 - - - - - - - oral cancer overexpressed 1
65. hmp19 2554 0.999 - 0.999 - - - - - - - HMP19 protein
66. pdik1l ENSDARG00000056509 548 0.999 - 0.999 - - - - - - - PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]
67. BAX BAX 1673 0.999 - 0.999 - - - - - - -
68. mff ENSDARG00000053753 905 0.999 - 0.999 - - - - - - - mitochondrial fission factor [Source:ZFIN;Acc:ZDB-GENE-040426-1510]
69. ptprmb ptprmb 1516 0.999 - 0.999 - - - - - - -
70. E2F2 E2F2 871 0.999 - 0.999 - - - - - - -
71. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 0.999 - 0.999 - - - - - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
72. tsc2 ENSDARG00000103125 1403 0.999 - 0.999 - - - - - - - TSC complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2702]
73. map2 ENSDARG00000055052 6062 0.999 - 0.999 - - - - - - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
74. tma16 ENSDARG00000008068, ENSDARG00000115226 1169 0.999 - 0.999 - - - - - - - translation machinery associated 16 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-20]
75. si:dkey-181m9.5 si:dkey-181m9.5 1079 0.999 - 0.999 - - - - - - -
76. si:ch211-286b5.5 ENSDARG00000096661 3136 0.998 - 0.998 - - - - - - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
77. si:dkey-153m14.1 si:dkey-153m14.1 4591 0.998 - 0.998 - - - - - - -
78. wnt5b ENSDARG00000102464 1662 0.998 - 0.998 - - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
79. cyt1 ENSDARG00000092947 1717 0.998 - 0.998 - - - - - - - type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
80. lztfl1 ENSDARG00000105010 1697 0.998 - 0.998 - - - - - - - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
81. HOMEZ HOMEZ 1824 0.998 - 0.998 - - - - - - -
82. utp18 ENSDARG00000102618 1983 0.998 - 0.998 - - - - - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
83. acsl1 acsl1 4216 0.998 - 0.998 - - - - - - -
84. mrps30 ENSDARG00000104111 2900 0.998 - 0.998 - - - - - - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
85. mir205 2147 0.998 - 0.998 - - - - - - - microRNA 205
86. IM:7163548 IM:7163548 6540 0.998 - 0.998 - - - - - - -
87. aurka ENSDARG00000012485 3304 0.998 - 0.998 - - - - - - - aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
88. samhd1 ENSDARG00000071288 1279 0.997 - 0.997 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
89. mllt4 mllt4 2939 0.997 - 0.997 - - - - - - -
90. dpy30 ENSDARG00000004427 7112 0.997 - 0.997 - - - - - - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
91. tnfrsf9a ENSDARG00000060498, ENSDARG00000116466 679 0.997 - 0.997 - - - - - - - tumor necrosis factor receptor superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060421-8213]
92. IL17RD ENSDARG00000098359 2309 0.997 - 0.997 - - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
93. lsmd1 lsmd1 2227 0.997 - 0.997 - - - - - - -
94. CABZ01076275.1 ENSDARG00000100753 5137 0.997 - 0.997 - - - - - - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
95. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 0.996 - 0.996 - - - - - - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
96. urm1 ENSDARG00000091198, ENSDARG00000111234 1213 0.996 - 0.996 - - - - - - - ubiquitin related modifier 1 [Source:ZFIN;Acc:ZDB-GENE-091204-300]
97. mrps6 ENSDARG00000039543 1892 0.996 - 0.996 - - - - - - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
98. tusc2b ENSDARG00000025340 2391 0.996 - 0.996 - - - - - - - tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
99. hmcn1 ENSDARG00000016936 1706 0.996 - 0.996 - - - - - - - hemicentin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-322]
100. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 0.995 - 0.995 - - - - - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]

There are 922 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA