Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ccdc41

Gene Name Gene ID Reads Annotation
ccdc41 ccdc41 97










Genes with expression patterns similar to ccdc41

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc41 ccdc41 97 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 2 - - - - - 1.000 1.000 - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
3. CR356223.1 ENSDARG00000093865 1 2 - - - - - 1.000 1.000 - -
4. BX323793.3 BX323793.3 7 2 - - - - - 1.000 1.000 - -
5. CR847543.1 ENSDARG00000086708 155 1.999 - - - - - - 1.000 0.999 -
6. RBBP6_11 RBBP6_11 6 1.876 - - - - 0.876 - 1.000 - -
7. rhobtb2b ENSDARG00000089340 4 1.876 - - - - 0.876 1.000 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
8. irak1 ENSDARG00000025949 19 1.849 - - - - 0.849 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
9. RFC4 ENSDARG00000042458 3694 1.805 - - - - - 0.844 - 0.961 - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
10. FNDC3A ENSDARG00000105503 11 1.799 - 0.799 - - - 1.000 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
11. ripply2 ENSDARG00000070535 18 1.799 - 0.799 - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
12. si:ch211-173p18.3_1 ENSDARG00000035821 36 1.773 - - - - 0.773 - - 1.000 - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
13. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 1.766 - - - - - - 0.767 0.999 -
14. FGD5 FGD5 250 1.759 - - - - - - 0.772 0.987 -
15. CR392001.1 ENSDARG00000095478 15 1.741 - 0.908 - - - 0.833 - - -
16. lft1 ENSDARG00000019920 66 1.741 - 0.741 - - - - 1.000 - - lefty1 [Source:ZFIN;Acc:ZDB-GENE-990630-10]
17. si:dkeyp-80d11.1 ENSDARG00000101087 91 1.726 - - - - - 0.726 1.000 - - si:dkeyp-80d11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4126]
18. si:busm1-228j01.5 si:busm1-228j01.5 9 1.709 - - - - 0.876 0.833 - - -
19. bicc1b ENSDARG00000070497 406 1.695 - 0.783 - - - - - 0.912 - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
20. RETSAT ENSDARG00000070140 36 1.655 - - - - - 0.864 0.791 - - retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
21. opn4b ENSDARG00000053929 143 1.63 - - - - - 0.908 0.722 - - opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]
22. poc5 ENSDARG00000059982 569 1.61 - - - - - 0.894 0.716 - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
23. unc13d ENSDARG00000078249 91 1.582 - - - - 0.708 - 0.874 - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
24. mxe ENSDARG00000014427 6 1.565 - - - - 0.706 - 0.859 - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
25. fgf6a ENSDARG00000009351 799 1.547 - 0.726 - - - - - 0.821 - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
26. fastkd3 ENSDARG00000100440 144 1.543 - 0.807 - - - - 0.736 - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
27. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.534 - 0.701 - - - - - 0.833 - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
28. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 1.51 - 0.799 - - - - 0.711 - - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
29. tap1 ENSDARG00000079766 75 1.503 - - - - 0.786 0.717 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
30. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.49 - - - - - - 0.713 0.777 - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
31. ttc3 ENSDARG00000086075 2157 1.464 - - - - - 0.727 - 0.737 - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
32. C1GALT1_1 C1GALT1_1 1 1 - - - - - - 1.000 - -
33. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
34. FP325123.1_1 ENSDARG00000105359 38 1 - - - - - - 1.000 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
35. npnt ENSDARG00000018721 19 1 - - - - - - 1.000 - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
36. B2M ENSDARG00000053136 2 1 - - - - - - 1.000 - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
37. LRRC41 LRRC41 11 1 - - - - - - 1.000 - -
38. si:dkey-91f15.8 18 1 - - - - - - 1.000 - - si:dkey-91f15.8, transcript variant X1
39. SH2D1B SH2D1B 60 1 - - - - - - 1.000 - -
40. zzef1 ENSDARG00000094380 4 1 - - - - - - 1.000 - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
41. C20H2orf70 C20H2orf70 8 1 - - - - - - 1.000 - -
42. kcnh4 kcnh4 6 1 - - - - - - 1.000 - -
43. si:ch211-260m19.8 si:ch211-260m19.8 33 1 - - - - - - 1.000 - -
44. thbs4a ENSDARG00000102777 625 1 - - - - - 1.000 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
45. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
46. rs1 rs1 70 1 - - - - - - 1.000 - -
47. gpr55a ENSDARG00000043447 12 1 - - - - - - 1.000 - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
48. CABZ01006835.1 CABZ01006835.1 92 1 - - - - - - 1.000 - -
49. ZC2HC1C ENSDARG00000070526 14 1 - - - - - 1.000 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
50. TSPAN1 ENSDARG00000052027 4 1 - - - - - 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
51. mir15a-1 36 1 - - - - - - 1.000 - - microRNA 15a-1
52. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
53. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - - 1.000 - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
54. TRIM35_5 TRIM35_5 1 1 - - - - - - 1.000 - -
55. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
56. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
57. fgl2 fgl2 9 1 - - - - - - 1.000 - -
58. SH3RF2 ENSDARG00000101178 0 1 - - - - - - 1.000 - - SH3 domain containing ring finger 2 [Source:ZFIN;Acc:ZDB-GENE-141212-301]
59. prkacbb_1 ENSDARG00000059125 83 1 - - - - - - 1.000 - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
60. il12bb ENSDARG00000054542 6 1 - - - - - 1.000 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
61. BX004880.2 BX004880.2 83 1 - - - - - 1.000 - - -
62. kcnh3 ENSDARG00000069560 4 1 - - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
63. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - 1.000 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
64. si:dkeyp-87d1.1 ENSDARG00000104681 35 1 - - - - - - - 1.000 - si:dkeyp-87d1.1 [Source:ZFIN;Acc:ZDB-GENE-041014-75]
65. man2a1 ENSDARG00000102200 12 1 - - - - - - 1.000 - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
66. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - - - - 1.000 - -
67. wu:fb64b08 wu:fb64b08 8 1 - - - - - - 1.000 - -
68. CT573356.3 CT573356.3 2 1 - - - - - 1.000 - - -
69. OMA1 ENSDARG00000090503 19 1 - - - - - - 1.000 - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
70. si:dkey-125h23.1 si:dkey-125h23.1 23 1 - - - - - - 1.000 - -
71. si:dkey-112e17.1 ENSDARG00000093201 1 1 - - - - - 1.000 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
72. zgc:66473_1 ENSDARG00000087289, ENSDARG00000087375 1 1 - - - - - - 1.000 - - zgc:66473 [Source:ZFIN;Acc:ZDB-GENE-030131-5708]
73. zgc:158856 zgc:158856 23 1 - - - - - - 1.000 - -
74. uts1 ENSDARG00000014927 35 1 - - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
75. psme2 ENSDARG00000033144 3 1 - - - - - - 1.000 - - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
76. meiob 75 1 - - - - - - - 1.000 - meiosis specific with OB domains
77. olfcg2 ENSDARG00000101083 8 1 - - - - - 1.000 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
78. snR50 snR50 1 1 - - - - - 1.000 - - -
79. TP53I3 60 1 - - - - - - 1.000 - - tumor protein p53 inducible protein 3, transcript variant X1
80. cldn10l2 ENSDARG00000105042 11 1 - - - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
81. ftr58 ENSDARG00000071238 10 1 - - - - - 1.000 - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
82. tbl2 ENSDARG00000043357 125 1 - - - - - 1.000 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
83. zgc:195170 ENSDARG00000076264 3 1 - - - - - - 1.000 - - zgc:195170 [Source:ZFIN;Acc:ZDB-GENE-080723-62]
84. fam166b ENSDARG00000100292 14 1 - - - - - 1.000 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
85. NINJ1 ENSDARG00000103663 43 1 - - - - - 1.000 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
86. si:ch211-176g6.2 ENSDARG00000079791 4 1 - - - - - - 1.000 - - si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
87. trpm5 ENSDARG00000059792 3 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
88. BX569789.2 BX569789.2 12 1 - - - - - - 1.000 - -
89. CKMT2 CKMT2 10 1 - - - - - - 1.000 - -
90. CR388228.1 ENSDARG00000117809 31 1 - - - - - - - 1.000 - uncharacterized LOC110437756 [Source:NCBI gene;Acc:110437756]
91. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - - - - - - 1.000 - -
92. si:dkey-10g2.5 si:dkey-10g2.5 72 1 - - - - - - 1.000 - -
93. AHSG AHSG 3 1 - - - - - - 1.000 - -
94. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - - 1.000 - - -
95. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - - 1.000 - -
96. CABZ01084273.1 CABZ01084273.1 16 1 - - - - - 1.000 - - -
97. NWD1 ENSDARG00000076110 3 1 - - - - - - 1.000 - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
98. dync1i2a ENSDARG00000078386 53 1 - - - - - - 1.000 - - dynein, cytoplasmic 1, intermediate chain 2a [Source:ZFIN;Acc:ZDB-GENE-060929-1086]
99. BX664622.2 BX664622.2 1 1 - - - - - - 1.000 - -
100. sox11a ENSDARG00000077811 25 1 - - - - - 1.000 - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]

There are 1020 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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