Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for calub

Gene Name Gene ID Reads Annotation
calub ENSDARG00000005115 1478 calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]










Genes with expression patterns similar to calub

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. calub ENSDARG00000005115 1478 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
2. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 2.567 0.943 - - - - - 0.912 - 0.712 RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
3. rnf168 ENSDARG00000112483 594 1.988 0.993 - - - - - 0.995 - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
4. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.938 0.980 - - - - - 0.958 - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
5. fam3c ENSDARG00000056152 3833 1.883 0.888 - - - - - 0.995 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
6. loxl2b ENSDARG00000044074 1919 1.866 - 0.872 - - - - 0.994 - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
7. arid1aa ENSDARG00000101710 3644 1.857 - 0.873 - - - - 0.984 - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
8. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.846 0.990 0.856 - - - - - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
9. b2ml ENSDARG00000015887 1060 1.818 - 0.828 - - - - 0.990 - - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
10. HDAC5 ENSDARG00000075139 1287 1.802 0.993 - - - - 0.809 - - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
11. taf6l ENSDARG00000079684 1408 1.797 0.993 - - - - 0.804 - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
12. snx1a ENSDARG00000071031 3975 1.791 0.974 0.817 - - - - - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
13. slc25a5 ENSDARG00000092553 626 1.779 0.993 0.786 - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
14. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.778 - 0.790 - - - - 0.988 - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
15. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 1.774 - 0.778 - - - - 0.996 - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
16. wbscr16 wbscr16 791 1.769 0.991 0.778 - - - - - - -
17. immt ENSDARG00000102874 3435 1.763 0.969 0.794 - - - - - - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
18. fbln2 ENSDARG00000015156 1694 1.755 0.970 0.785 - - - - - - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
19. fahd1 ENSDARG00000031657 521 1.748 - 0.756 - - - - 0.992 - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
20. stx4 ENSDARG00000052518 1848 1.738 - - - - - 0.745 0.993 - - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
21. WDR1 ENSDARG00000114022 7532 1.719 0.923 - - - - - 0.796 - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
22. ino80db ENSDARG00000062226 504 1.701 0.993 0.708 - - - - - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
23. CABZ01079427.1 CABZ01079427.1 1682 1.701 0.988 0.713 - - - - - - -
24. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.698 - 0.712 - - - - 0.986 - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
25. clica clica 6206 1.692 - 0.721 - - - - 0.971 - -
26. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.625 0.901 0.724 - - - - - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
27. C22H6orf89 C22H6orf89 1076 1.625 - 0.791 - - - - 0.834 - -
28. 5_8S_rRNA_1 5_8S_rRNA_1 563 1.597 0.895 - - - - 0.702 - - -
29. cyp2aa8 ENSDARG00000104540 2947 1.584 0.754 - - - - - 0.830 - - cytochrome P450, family 2, subfamily AA, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-041010-183]
30. zzz3 ENSDARG00000077581 1343 1.582 - 0.800 - - - - - 0.782 - zinc finger, ZZ-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6450]
31. DLGAP4 DLGAP4 443 1.569 - 0.831 - 0.738 - - - - -
32. hspb9 ENSDARG00000078674 2755 1.566 0.737 0.829 - - - - - - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
33. PHF13 ENSDARG00000102023 1102 1.564 0.740 0.824 - - - - - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
34. ccnb1 ENSDARG00000051923 3226 1.558 - 0.725 - - - - 0.833 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
35. PRKAB2 2489 1.554 - 0.827 - - - 0.727 - - - protein kinase, AMP-activated, beta 2 non-catalytic subunit
36. tmem151b tmem151b 442 1.538 - - - 0.725 - 0.813 - - -
37. cog7 ENSDARG00000061372 789 1.524 - 0.819 - - - - - 0.705 - component of oligomeric golgi complex 7 [Source:ZFIN;Acc:ZDB-GENE-061013-463]
38. arpc4 ENSDARG00000054063 6150 1.487 - - - - - - 0.767 - 0.720 actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
39. echs1 ENSDARG00000001578 3733 1.469 - 0.750 - - - - - 0.719 - enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
40. odc1 ENSDARG00000007377 8957 1.468 0.726 - - - - - 0.742 - - ornithine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-010816-1]
41. zgc:162967 zgc:162967 2132 1.466 - 0.755 - 0.711 - - - - -
42. bccip ENSDARG00000004948 593 1.464 - 0.745 - 0.719 - - - - - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
43. IGSF8 ENSDARG00000038467 2102 0.998 - - - - - - 0.998 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
44. tmem104 ENSDARG00000088560 859 0.997 - - - - - - 0.997 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
45. trappc3 ENSDARG00000045364 1021 0.997 - - - - - - 0.997 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
46. CU019646.2 CU019646.2 519 0.997 - - - - - - 0.997 - -
47. timeless ENSDARG00000078497 1114 0.997 - - - - - - 0.997 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
48. nup98 ENSDARG00000074955 3998 0.997 - - - - - - 0.997 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
49. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 0.997 - - - - - - 0.997 - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
50. hiat1a ENSDARG00000013117 607 0.997 - - - - - - 0.997 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
51. fam102ba ENSDARG00000053104 845 0.997 - - - - - - 0.997 - - family with sequence similarity 102, member B, a [Source:ZFIN;Acc:ZDB-GENE-060616-312]
52. pam ENSDARG00000100170 2442 0.997 - - - - - - 0.997 - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
53. si:ch73-18b11.1 si:ch73-18b11.1 3840 0.997 - - - - - - 0.997 - -
54. med14 ENSDARG00000009953 1383 0.997 - - - - - - 0.997 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
55. gnpat ENSDARG00000074401 479 0.996 - - - - - - 0.996 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
56. znf451 ENSDARG00000076939 508 0.996 - - - - - - 0.996 - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
57. rtdr1 rtdr1 158 0.996 - - - - - - 0.996 - -
58. ENSDARG00000078787 ENSDARG00000078787 97 0.996 - - - - - - 0.996 - -
59. NBR1 NBR1 752 0.996 - - - - - - 0.996 - -
60. ccdc22 ENSDARG00000052379 2276 0.996 - - - - - - 0.996 - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
61. rrp7a ENSDARG00000098934 1123 0.996 - - - - - - 0.996 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
62. si:ch211-51a6.2 ENSDARG00000030967 593 0.996 - - - - - - 0.996 - - si:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
63. RAB38 122 0.996 - - - - - - 0.996 - - RAB38, member RAS oncogene family
64. TPGS1 TPGS1 228 0.996 - - - - - - 0.996 - -
65. slc35b1 ENSDARG00000038213 465 0.996 - - - - - - 0.996 - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
66. ino80c ENSDARG00000055719 1512 0.996 - - - - - - 0.996 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
67. mpeg1 mpeg1 123 0.996 - - - - - - 0.996 - -
68. cap1 ENSDARG00000016350 891 0.996 - - - - - - 0.996 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
69. ipmkb ENSDARG00000029291 625 0.996 - - - - - - 0.996 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
70. cryba1b ENSDARG00000053875 3256 0.996 - - - - - - 0.996 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
71. acad11 ENSDARG00000045411 350 0.996 - - - - - - 0.996 - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
72. pdcd10b ENSDARG00000012591 3395 0.996 - - - - - - 0.996 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
73. nlk1 ENSDARG00000006566 1123 0.996 - - - - - - 0.996 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
74. magixa ENSDARG00000025108 561 0.996 - - - - - - 0.996 - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
75. itsn2a ENSDARG00000000161 115 0.996 - - - - - - 0.996 - - intersectin 2a [Source:ZFIN;Acc:ZDB-GENE-041014-84]
76. AL954146.1 ENSDARG00000038891 114 0.996 - - - - - - 0.996 - - trypsin I-P1-like [Source:NCBI gene;Acc:560023]
77. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.996 - - - - - - 0.996 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
78. mapk15 ENSDARG00000100822 157 0.996 - - - - - - 0.996 - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
79. ptk6a ENSDARG00000017947 682 0.996 - - - - - - 0.996 - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
80. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.996 - - - - - - 0.996 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
81. CNOT4 CNOT4 899 0.996 - - - - - - 0.996 - -
82. fbrsl1 ENSDARG00000058232 885 0.996 - - - - - - 0.996 - - fibrosin-like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-487]
83. ankrd6b ENSDARG00000029370 429 0.996 - - - - - - 0.996 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
84. ncoa6 ENSDARG00000071272 759 0.996 - - - - - - 0.996 - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
85. slc22a2 ENSDARG00000030530 313 0.995 0.995 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
86. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 0.995 - - - - - - 0.995 - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
87. wdr3 ENSDARG00000011079 1403 0.995 0.995 - - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
88. ubald1a_1 ENSDARG00000002362 401 0.995 - - - - - - 0.995 - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
89. CABZ01078431.1 CABZ01078431.1 183 0.995 - - - - - - 0.995 - -
90. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.995 0.995 - - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
91. CABZ01115256.1 CABZ01115256.1 683 0.995 - - - - - - 0.995 - -
92. phax ENSDARG00000044298 2302 0.995 - - - - - - 0.995 - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
93. C2H6orf52 C2H6orf52 2847 0.995 - - - - - - 0.995 - -
94. AL935029.1 AL935029.1 514 0.995 0.995 - - - - - - - -
95. ARSB ENSDARG00000108788 774 0.995 - - - - - - 0.995 - - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
96. tarbp2 ENSDARG00000070471 1946 0.995 0.995 - - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
97. tmem194a tmem194a 745 0.994 0.994 - - - - - - - -
98. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.994 - - - - - - 0.994 - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
99. cacna1ba ENSDARG00000021735 870 0.994 - - - - - - 0.994 - - calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
100. zyx ENSDARG00000075733 429 0.994 0.994 - - - - - - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]

There are 1214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA