Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for calm3a

Gene Name Gene ID Reads Annotation
calm3a ENSDARG00000015050, ENSDARG00000100825 1817 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]










Genes with expression patterns similar to calm3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
2. lgi1a ENSDARG00000020493 1218 3.384 0.782 - - - 0.984 0.863 0.755 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
3. dpysl3 ENSDARG00000002587 4381 3.306 0.750 - 0.773 - - 0.865 0.918 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
4. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 3.29 0.767 0.910 - - - 0.898 0.715 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
5. marcksa ENSDARG00000004049 2518 3.255 - - 0.731 - 0.935 0.835 0.754 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
6. calm1a ENSDARG00000021811 4791 3.224 - - 0.720 - 0.890 0.821 0.793 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
7. tmem35 ENSDARG00000052567 5685 3.135 0.714 - - - 0.735 0.822 0.864 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
8. UBE2QL1 ENSDARG00000079276 3474 2.714 - - - - 0.978 0.844 0.892 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
9. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.69 - - - - 0.961 0.815 0.914 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
10. TUBB8P7_1 TUBB8P7_1 2722 2.652 - - - - 0.977 0.756 0.919 - -
11. msi1 ENSDARG00000010710 2634 2.608 - - - - 0.888 0.814 0.906 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
12. atp6v0cb ENSDARG00000036577 3472 2.591 - - - - 0.961 0.711 0.919 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
13. syngr3a ENSDARG00000014871 405 2.558 0.772 - - - - 0.928 0.858 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
14. lhx1a ENSDARG00000014018 958 2.55 0.778 - - - - 0.870 0.902 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
15. fbxo41 ENSDARG00000078908 95 2.54 0.757 - - - - 0.906 0.877 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
16. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.537 0.815 - - - 0.963 - 0.759 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
17. nell2b ENSDARG00000062797 854 2.536 0.743 - - - - 0.872 0.921 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
18. STMN3 ENSDARG00000038465 1009 2.533 0.821 - - - - 0.785 0.927 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
19. dtnbp1b ENSDARG00000055206 64 2.532 0.724 - - - - 0.925 0.883 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
20. rbfox3 rbfox3 1443 2.517 0.765 - - - - 0.848 0.904 - -
21. srgap1 srgap1 2320 2.514 - - 0.781 - 0.974 0.759 - - -
22. hoxa5a ENSDARG00000102501 1667 2.513 - - 0.905 - - 0.738 0.870 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
23. nrarpb ENSDARG00000018958 6225 2.504 0.712 - - - 0.897 - 0.895 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
24. tmem59l ENSDARG00000003655 1536 2.504 0.717 - - - - 0.937 0.850 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
25. nhlh2 ENSDARG00000025495 1860 2.5 0.721 - - - - 0.889 0.890 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
26. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.498 - - 0.745 - - 0.920 0.833 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
27. ccdc28b ENSDARG00000011222 528 2.485 0.721 - - - 0.982 - 0.782 - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
28. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.478 0.737 - - - 0.958 - 0.783 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
29. sin3b ENSDARG00000062472 2025 2.468 - - - - 0.977 0.717 0.774 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
30. nova2 ENSDARG00000017673 7685 2.466 0.721 - - - - 0.862 0.883 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
31. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.462 0.758 - - - - 0.862 0.842 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
32. SYT2 ENSDARG00000014169 265 2.453 0.762 - - - - 0.937 0.754 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
33. nefma ENSDARG00000021351 790 2.449 0.740 - - - 0.982 0.727 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
34. skor1b ENSDARG00000062448, ENSDARG00000112341 282 2.434 0.739 - - - - 0.816 0.879 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
35. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.433 0.776 - - - - 0.739 0.918 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
36. cacng8b ENSDARG00000070626 176 2.432 0.784 - - - - 0.722 0.926 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
37. CABZ01080599.2 CABZ01080599.2 192 2.426 0.755 - - - - 0.769 0.902 - -
38. SLITRK5 SLITRK5 122 2.419 0.824 - - - - 0.775 0.820 - -
39. snap25a ENSDARG00000020609 4537 2.406 0.721 - - - - 0.752 0.933 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
40. hoxa9a ENSDARG00000105013 1509 2.377 - - 0.917 - - 0.717 0.743 - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
41. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 2.348 0.704 - - - - 0.901 0.743 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
42. SLC35F4 ENSDARG00000103124 55 2.346 0.722 - - - - 0.751 0.873 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
43. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 2.345 0.711 - - - - 0.842 0.792 - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
44. SEMA7A ENSDARG00000078707 465 2.339 - - - - - 0.711 0.907 0.721 - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
45. negr1 ENSDARG00000021607 1051 2.337 0.725 - - - - 0.826 0.786 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
46. her4.1 ENSDARG00000056732 1264 2.328 0.755 - - - - 0.724 0.849 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
47. gphnb ENSDARG00000100851 118 2.314 0.721 - - - - 0.741 0.852 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
48. syt12 ENSDARG00000101776 215 2.302 0.708 - - - - 0.708 0.886 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
49. Sep-03 Sep-03 1124 2.286 0.738 - - - - 0.718 0.830 - -
50. tmem229b ENSDARG00000060569 516 2.275 - 0.770 - - - 0.710 0.795 - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
51. ago4 ENSDARG00000100854 496 1.906 - 0.925 - - 0.981 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
52. elavl4 ENSDARG00000045639 998 1.868 - - - - - 0.936 0.932 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
53. slc8a2b ENSDARG00000100592 598 1.855 - - - - - 0.929 0.926 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
54. APBB3 ENSDARG00000053771 654 1.848 - - - - - 0.926 0.922 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
55. cspg5a ENSDARG00000069981 1699 1.839 - - - - - 0.931 0.908 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
56. CR548630.1 CR548630.1 3301 1.839 - - - - 0.969 0.870 - - -
57. TUBB8P7_2 TUBB8P7_2 565 1.824 - - - - - 0.906 0.918 - -
58. dbx2 2971 1.824 - - - - - 0.892 0.932 - - developing brain homeobox 2
59. mb21d2a mb21d2a 421 1.824 - - - - - 0.937 0.887 - -
60. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.823 - - - - - 0.920 0.903 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
61. layna ENSDARG00000035169 515 1.823 - - 0.916 - - - 0.907 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
62. hvcn1 ENSDARG00000040338 571 1.823 - 0.837 - - 0.986 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
63. slc35g2b ENSDARG00000045447 378 1.819 - - - - - 0.936 0.883 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
64. pcp4b 1080 1.819 - - - - - 0.894 0.925 - - Purkinje cell protein 4b
65. clstn3 ENSDARG00000073883 590 1.818 - - - - - 0.912 0.906 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
66. itm2ca ENSDARG00000043448 1265 1.818 - - - - - 0.890 0.928 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
67. FGFBP3 FGFBP3 993 1.817 - - - - - 0.921 0.896 - -
68. gng3 ENSDARG00000009553 2530 1.817 - - - - - 0.889 0.928 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
69. hccs hccs 1758 1.816 - - 0.839 - 0.977 - - - -
70. bhlhe22 ENSDARG00000058039 1673 1.813 - - - - - 0.895 0.918 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
71. EPB41L1 EPB41L1 1896 1.813 - - - - - 0.889 0.924 - -
72. lrrtm1 ENSDARG00000052713 1041 1.811 - - - - - 0.944 0.867 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
73. SPOCK1 ENSDARG00000074644 794 1.807 - - - - - 0.897 0.910 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
74. scn2b ENSDARG00000101713 796 1.806 - - - - - 0.880 0.926 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
75. elavl3 ENSDARG00000014420 8644 1.806 - - - - - 0.912 0.894 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
76. sall3b ENSDARG00000057586 982 1.804 - - - - - 0.870 0.934 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
77. GRIN3A ENSDARG00000075802 27 1.804 - - - - - 0.905 0.899 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
78. NPTXR NPTXR 241 1.803 - - - - - 0.872 0.931 - -
79. sypb ENSDARG00000002230 262 1.802 - - - - - 0.888 0.914 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
80. dnajc5aa ENSDARG00000042948 2885 1.8 - - - - - 0.917 0.883 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
81. sulf2 sulf2 1286 1.798 - - - - 0.980 - 0.818 - -
82. ckbb ENSDARG00000043257 3503 1.797 - - - - - 0.878 0.919 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
83. cdk5r1b ENSDARG00000045087 2075 1.796 - - - - - 0.877 0.919 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
84. ntrk2a ENSDARG00000059897 185 1.79 - - - - - 0.881 0.909 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
85. scube2 ENSDARG00000037362 2833 1.789 - - - - 0.936 0.853 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
86. C24H17orf96 C24H17orf96 1538 1.788 - - - - 0.962 - 0.826 - -
87. cadpsb ENSDARG00000070567 458 1.787 - - - - - 0.885 0.902 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
88. gsx1 ENSDARG00000035735 1243 1.787 - - - - - 0.880 0.907 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
89. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.786 - - - - - 0.919 0.867 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
90. AGO1 ENSDARG00000092644 4521 1.785 - - - - - 0.880 0.905 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
91. zgc:100906 ENSDARG00000033599 344 1.785 0.847 - - - - 0.938 - - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
92. cenpi ENSDARG00000052565 482 1.78 - - - - 0.979 0.801 - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
93. rab39b rab39b 449 1.78 - - - - - 0.878 0.902 - -
94. vsnl1b ENSDARG00000044053 1120 1.779 - - - - - 0.878 0.901 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
95. larp7 ENSDARG00000017315 1194 1.779 - - - - 0.980 0.799 - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
96. neurog1 ENSDARG00000056130 3924 1.778 - - - - - 0.871 0.907 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
97. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.778 - - - - - 0.890 0.888 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
98. her4.3 ENSDARG00000070770 613 1.776 - - - - - 0.908 0.868 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
99. slc12a5b ENSDARG00000078187 329 1.775 - - - - - 0.909 0.866 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
100. grin1a ENSDARG00000027828 1327 1.775 - - - - - 0.886 0.889 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]

There are 2688 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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