Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgef3l

Gene Name Gene ID Reads Annotation
arhgef3l ENSDARG00000037554 23 Rho guanine nucleotide exchange factor (GEF) 3, like [Source:ZFIN;Acc:ZDB-GENE-050522-85]










Genes with expression patterns similar to arhgef3l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef3l ENSDARG00000037554 23 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho guanine nucleotide exchange factor (GEF) 3, like [Source:ZFIN;Acc:ZDB-GENE-050522-85]
2. dgkza ENSDARG00000014439 82 1.801 - - - - - 0.858 0.943 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
3. SLC25A22_1 SLC25A22_1 3 1.786 - - - - - 0.843 0.943 - -
4. METTL15 ENSDARG00000089236 39 1.732 - - - - - 0.950 0.782 - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
5. si:dkey-88j15.5 si:dkey-88j15.5 48 1.72 - - - - - 0.956 0.764 - -
6. ENSDARG00000074422 ENSDARG00000074422 61 1.712 - - - - - 0.769 0.943 - -
7. si:dkey-28d5.13 ENSDARG00000077260 3 1.661 - - - 0.718 - - 0.943 - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
8. camk1ga ENSDARG00000044526 5 1.657 - - 0.714 - - - 0.943 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
9. TRIM14_3 TRIM14_3 7 1.657 - - 0.714 - - - 0.943 - -
10. CABZ01080142.1 CABZ01080142.1 52 1.628 - - - - - 0.835 0.793 - -
11. fbxw9 ENSDARG00000058020 28 1.625 - - - - - 0.843 0.782 - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
12. klhl23 ENSDARG00000078475 92 1.596 - - - - - 0.785 0.811 - - kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
13. GPR141_1 GPR141_1 33 1.524 - - 0.714 - - 0.810 - - -
14. lin9 ENSDARG00000028475 77 1.523 - - - - - 0.777 0.746 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
15. prkaa2 ENSDARG00000060641 12 1.464 - - - 0.718 - - 0.746 - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]
16. klf9 ENSDARG00000068194 5 1.428 - - - 0.701 - - 0.727 - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
17. hk2 ENSDARG00000101482, ENSDARG00000116757 92 1 - - - - - 1.000 - - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
18. fabp6 ENSDARG00000044566 46 1 - - - - - - 1.000 - - fatty acid binding protein 6, ileal (gastrotropin) [Source:ZFIN;Acc:ZDB-GENE-040625-49]
19. KCNJ15 ENSDARG00000058988 18 1 - - - - - 1.000 - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
20. SLC5A8 ENSDARG00000087120 60 1 - - - - - 1.000 - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
21. si:ch211-225p5.3 si:ch211-225p5.3 10 1 - - - - - - 1.000 - -
22. ptx3b ENSDARG00000079515 10 1 - - - - - 1.000 - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
23. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 1 - - - - - 1.000 - - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
24. sv2ba ENSDARG00000057427 33 1 - - - - - 1.000 - - - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
25. BX548078.2 BX548078.2 6 1 - - - - - 1.000 - - -
26. slc9a3.1 ENSDARG00000058498 46 1 - - - - - 1.000 - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
27. ENSDARG00000039608 ENSDARG00000039608 23 0.984 - - - - - 0.984 - - -
28. mir451a 131 0.962 - - - - - - 0.962 - - microRNA 451a
29. si:dkeyp-14d3.1 66 0.962 - - - - - - 0.962 - - si:dkeyp-14d3.1, transcript variant X4
30. crp7 ENSDARG00000071456 7 0.962 - - - - - - 0.962 - - C-reactive protein 7 [Source:ZFIN;Acc:ZDB-GENE-070822-13]
31. si:ch211-199c19.4 si:ch211-199c19.4 27 0.953 - - - - - 0.953 - - -
32. adam8a ENSDARG00000001452 316 0.945 - - - - - - 0.945 - - ADAM metallopeptidase domain 8a [Source:ZFIN;Acc:ZDB-GENE-030616-622]
33. si:dkey-148b12.4 si:dkey-148b12.4 2 0.943 - - - - - - 0.943 - -
34. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 0.943 - - - - - - 0.943 - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
35. NPFFR1 ENSDARG00000111997 29 0.943 - - - - - - 0.943 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
36. slc18b1 ENSDARG00000044047 7 0.943 - - - - - - 0.943 - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
37. map2k4a ENSDARG00000063583 38 0.943 - - - - - - 0.943 - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
38. PEG3_17 PEG3_17 15 0.943 - - - - - - 0.943 - -
39. C24H8orf34 C24H8orf34 1 0.943 - - - - - - 0.943 - -
40. zgc:153846 ENSDARG00000040738 1 0.943 - - - - - - 0.943 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
41. GALNT8_1 GALNT8_1 10 0.943 - - - - - - 0.943 - -
42. SNORA81_1 SNORA81_1 8 0.943 - - - - - - 0.943 - -
43. CU861664.1 CU861664.1 53 0.943 - - - - - - 0.943 - -
44. RAPGEF4 ENSDARG00000079872 82 0.943 - - - - - - 0.943 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
45. si:ch211-113a14.15_1 2 0.943 - - - - - - 0.943 - - si:ch211-113a14.15
46. SNORA63 SNORA63 7 0.943 - - - - - - 0.943 - -
47. sox17 ENSDARG00000101717 11 0.943 - - - - - - 0.943 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
48. BX682234.1 ENSDARG00000074732 5 0.943 - - - - - - 0.943 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
49. zgc:172053 ENSDARG00000038321 9 0.943 - - - - - - 0.943 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
50. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 0.943 - - - - - - 0.943 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
51. CABZ01048549.1 CABZ01048549.1 1 0.943 - - - - - - 0.943 - -
52. ripply2 ENSDARG00000070535 18 0.943 - - - - - - 0.943 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
53. ENSDARG00000077328 ENSDARG00000077328 1 0.943 - - - - - - 0.943 - -
54. rrad ENSDARG00000052011, ENSDARG00000112434 70 0.943 - - - - - - 0.943 - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
55. lipt2 ENSDARG00000069852 14 0.943 - - - - - - 0.943 - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
56. TRHDE TRHDE 1 0.943 - - - - - - 0.943 - -
57. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 0.943 - - - - - - 0.943 - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
58. CABZ01066695.1 CABZ01066695.1 12 0.943 - - - - - - 0.943 - -
59. zgc:66455 ENSDARG00000052375 3 0.943 - - - - - - 0.943 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
60. arr3a ENSDARG00000056511, ENSDARG00000114648 192 0.943 - - - - - - 0.943 - - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
61. purg ENSDARG00000099187, ENSDARG00000114450 33 0.943 - - - - - - 0.943 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
62. mir10b-2 116 0.943 - - - - - - 0.943 - - microRNA 10b-2
63. CR457462.1 CR457462.1 11 0.943 - - - - - - 0.943 - -
64. psmd2 ENSDARG00000103190 141 0.943 - - - - - - 0.943 - - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
65. MYO1G ENSDARG00000036104 1 0.943 - - - - - - 0.943 - - myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
66. CABZ01073112.1 CABZ01073112.1 40 0.943 - - - - - - 0.943 - -
67. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 0.943 - - - - - - 0.943 - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
68. ENSDARG00000091099 ENSDARG00000091099 5 0.943 - - - - - - 0.943 - -
69. fam219b ENSDARG00000104637 3 0.943 - - - - - - 0.943 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
70. GPR78 GPR78 17 0.943 - - - - - - 0.943 - -
71. CU469532.1 CU469532.1 31 0.943 - - - - - - 0.943 - -
72. VWDE_1 VWDE_1 2 0.943 - - - - - - 0.943 - -
73. si:dkey-94f20.4 ENSDARG00000016923 2 0.943 - - - - - - 0.943 - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
74. CABZ01090975.1 CABZ01090975.1 9 0.943 - - - - - - 0.943 - -
75. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.943 - - - - - - 0.943 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
76. cthrc1b ENSDARG00000001971 44 0.943 - - - - - - 0.943 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
77. si:ch211-140o17.1 si:ch211-140o17.1 0 0.943 - - - - - - 0.943 - -
78. SNORA81 SNORA81 47 0.943 - - - - - - 0.943 - -
79. si:dkey-102f14.7 ENSDARG00000092255 1 0.943 - - - - - - 0.943 - - si:dkey-102f14.7 [Source:ZFIN;Acc:ZDB-GENE-060503-895]
80. DIP2B DIP2B 18 0.943 - - - - - - 0.943 - -
81. U4atac U4atac 47 0.943 - - - - - - 0.943 - -
82. hbaa2 ENSDARG00000069735 10 0.943 - - - - - - 0.943 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
83. spo11 ENSDARG00000013837 7 0.943 - - - - - - 0.943 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
84. ncf2 ENSDARG00000005821 28 0.943 - - - - - - 0.943 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
85. TNS3_1 TNS3_1 8 0.943 - - - - - - 0.943 - -
86. si:ch211-238g23.1 ENSDARG00000055746 23 0.943 - - - - - - 0.943 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
87. si:ch211-120e1.7 ENSDARG00000094634 14 0.943 - - - - - - 0.943 - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
88. TRIM35_3 TRIM35_3 172 0.943 - - - - - - 0.943 - -
89. ifit5 ifit5 12 0.943 - - - - - - 0.943 - -
90. CABZ01030033.1 ENSDARG00000117613 3 0.943 - - - - - - 0.943 - -
91. CR942805.1 CR942805.1 94 0.943 - - - - - - 0.943 - -
92. hyal3 ENSDARG00000036818 23 0.943 - - - - - - 0.943 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
93. fmn1 ENSDARG00000011975 5 0.943 - - - - - - 0.943 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
94. foxi1 ENSDARG00000104566 176 0.943 - - - - - - 0.943 - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
95. CABZ01080434.1 ENSDARG00000102438 4 0.943 - - - - - - 0.943 - -
96. RAB3IL1 ENSDARG00000007711 11 0.943 - - - - - - 0.943 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
97. BX682234.3 BX682234.3 7 0.943 - - - - - - 0.943 - -
98. sim1b ENSDARG00000013789 47 0.943 - - - - - - 0.943 - - SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]
99. il1b ENSDARG00000098700 27 0.943 - - - - - - 0.943 - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
100. si:ch211-163f10.4 si:ch211-163f10.4 1 0.943 - - - - - - 0.943 - -

There are 424 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA