Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TUB

Gene Name Gene ID Reads Annotation
TUB ENSDARG00000062165, ENSDARG00000111083 871 tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]










Genes with expression patterns similar to TUB

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TUB ENSDARG00000062165, ENSDARG00000111083 871 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
2. nlgn4a 102 1.852 0.929 - - - - 0.923 - - - neuroligin 4a, transcript variant X1
3. MAST1_1 MAST1_1 1595 1.841 - - - - - 0.841 1.000 - -
4. med16 ENSDARG00000040779, ENSDARG00000116309 939 1.785 0.931 - - - - 0.854 - - - mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
5. calb2b ENSDARG00000036344 2417 1.783 - - - - - 0.784 0.999 - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
6. celf4 ENSDARG00000070045 1537 1.769 - - - - - 0.933 - 0.836 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
7. atoh1b ENSDARG00000099564 494 1.761 0.951 - - - - - - 0.810 - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
8. gabrg2 ENSDARG00000053665 434 1.726 - - - - - 0.890 - 0.836 - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
9. magi1a ENSDARG00000070145 547 1.711 0.789 - - - - 0.922 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
10. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.706 - - - - - 0.872 - 0.834 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
11. BSN BSN 463 1.705 - - - - - 0.982 - 0.723 -
12. arf3b ENSDARG00000036998, ENSDARG00000112366 38 1.704 0.889 - - - - 0.815 - - - ADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]
13. KIF21B ENSDARG00000009733 53 1.698 0.923 - - - - 0.775 - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
14. lzts3b ENSDARG00000058558 166 1.696 - - - - - 0.897 - 0.799 - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
15. evlb ENSDARG00000099720 245 1.679 0.797 - - - - 0.882 - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
16. PRKAR2B ENSDARG00000036446 812 1.665 - - - - - 0.882 - 0.783 - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
17. TNFRSF25 TNFRSF25 6 1.663 0.889 - - - 0.774 - - - -
18. DNER ENSDARG00000061031 123 1.65 - - - - - 0.814 - 0.836 - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
19. pax6a ENSDARG00000103379 3061 1.645 - - - - - 0.906 - 0.739 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
20. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.643 - - - - - 0.906 - 0.737 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
21. fgf13b ENSDARG00000056633 455 1.638 - - - - - 0.860 - 0.778 - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
22. tmem179 ENSDARG00000013292 343 1.637 0.701 - - - - 0.936 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
23. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.634 - - - - - 0.890 - 0.744 - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
24. zgc:73228 zgc:73228 97 1.633 - - - - - 0.926 - 0.707 -
25. sprn ENSDARG00000056004 128 1.622 - - - - - 0.831 - 0.791 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
26. lrp11 ENSDARG00000034076 313 1.604 0.879 - - - - - - 0.725 - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
27. wdr47b ENSDARG00000099757 93 1.594 0.778 - - - - 0.816 - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
28. nsmfa ENSDARG00000060025 70 1.578 0.785 - - - - 0.793 - - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
29. syt11b ENSDARG00000056105 578 1.573 - - - - - 0.856 - 0.717 - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
30. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.56 - - - - - 0.792 - 0.768 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
31. camk1db ENSDARG00000017446 47 1.559 - - 0.857 - - - - 0.702 - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
32. ankk1 ENSDARG00000056921 119 1.555 0.783 - - - - 0.772 - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
33. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 1.528 - - - - - 0.777 - 0.751 - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
34. stard3nl ENSDARG00000045421 316 1.519 0.782 - - - - 0.737 - - - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
35. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.495 - - - - - 0.707 - 0.788 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
36. rgs12a ENSDARG00000009610 284 1.494 - - - - - 0.749 - 0.745 - regulator of G protein signaling 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2614]
37. SNAP91 ENSDARG00000098809 556 1.487 - - - - - 0.737 - 0.750 - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
38. SLC22A23_1 SLC22A23_1 308 1.482 - - - - - 0.713 - 0.769 -
39. igsf9ba ENSDARG00000033845 158 1.472 - - - - - 0.738 - 0.734 - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
40. fam219ab ENSDARG00000013813 591 1.469 - - - - - 0.752 - 0.717 - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
41. pcdh2ac ENSDARG00000099783 325 1.44 - - - - - 0.713 - 0.727 - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
42. pou4f2 ENSDARG00000069737 451 1.431 - - - - - 0.725 - 0.706 - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
43. taf1 ENSDARG00000035330 912 1.425 0.705 - - - - 0.720 - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
44. sipa1l2 ENSDARG00000061640 4545 1 - - - - - - 1.000 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
45. map3k1 ENSDARG00000098405 3043 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
46. eif2d ENSDARG00000012929 2624 1 - - - - - - 1.000 - - eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
47. CRELD1 794 1 - - - - - - 1.000 - - cysteine rich with EGF like domains 1
48. mid2 ENSDARG00000034871 1001 1 - - - - - - 1.000 - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
49. myo10 ENSDARG00000017004 2191 1 - - - - - - 1.000 - - myosin X [Source:ZFIN;Acc:ZDB-GENE-070912-277]
50. spen ENSDARG00000074245, ENSDARG00000116696 3054 1 - - - - - - 1.000 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
51. mrpl13 ENSDARG00000056903 2768 1 - - - - - - 1.000 - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
52. TMEM45A ENSDARG00000070743 1669 1 - - - - - - 1.000 - - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
53. oxr1b ENSDARG00000063310 929 1 - - - - - - 1.000 - - oxidation resistance 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2438]
54. zgc:73340 823 1 - - - - - - 1.000 - - zgc:73340
55. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 1 - - - - - - 1.000 - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
56. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 1 - - - - - - 1.000 - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
57. m6pr ENSDARG00000018432 1411 1 - - - - - - 1.000 - - mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
58. lamb2 ENSDARG00000002084 3265 0.999 - - - - - - 0.999 - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
59. aldh9a1b ENSDARG00000037061 2638 0.999 - - - - - - 0.999 - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
60. wu:fb12e11 wu:fb12e11 2332 0.999 - - - - - - 0.999 - -
61. rbfox2 ENSDARG00000052182 6621 0.999 - - - - - - 0.999 - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
62. eif5 ENSDARG00000003681 7986 0.999 - - - - - - 0.999 - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
63. dcun1d1 ENSDARG00000099642 2043 0.999 - - - - - - 0.999 - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
64. mtp_1 3298 0.999 - - - - - - 0.999 - - microsomal triglyceride transfer protein
65. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 0.998 - - - - - - 0.998 - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
66. psmd14 ENSDARG00000063100 15711 0.998 - - - - - - 0.998 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
67. mcm5 ENSDARG00000019507 6407 0.997 - - - - - - 0.997 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
68. gpt2l ENSDARG00000019541 3397 0.997 - - - - - - 0.997 - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
69. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 0.997 - - - - - - 0.997 - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
70. thrap3b ENSDARG00000098228 4396 0.997 - - - - - - 0.997 - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
71. hoxc6a ENSDARG00000070343 2839 0.997 - - - - - - 0.997 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
72. psmb3 ENSDARG00000013938 10744 0.997 - - - - - - 0.997 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
73. pak2a ENSDARG00000068177 8931 0.997 - - - - - - 0.997 - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
74. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 0.996 - - - - - - 0.996 - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
75. elavl1 11672 0.996 - - - - - - 0.996 - - ELAV like RNA binding protein 1, transcript variant X3
76. ddost ENSDARG00000037318 10904 0.995 - - - - - - 0.995 - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
77. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 0.995 - - - - - - 0.995 - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
78. hnrnph1l ENSDARG00000005551 8727 0.994 - - - - - - 0.994 - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
79. IGFN1 IGFN1 5030 0.994 - - - - - - 0.994 - -
80. ap3m1 ENSDARG00000029928 3772 0.993 - - - - - - 0.993 - - adaptor related protein complex 3 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-021015-2]
81. MYOM2_1 MYOM2_1 4054 0.993 - - - - - - 0.993 - -
82. cox7a2a ENSDARG00000053217 12564 0.993 - - - - - - 0.993 - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
83. PLCXD1_4 PLCXD1_4 3673 0.992 - - - - - - 0.992 - -
84. marcksl1b ENSDARG00000035715 37390 0.992 - - - - - - 0.992 - - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
85. s100v2 ENSDARG00000070702 8645 0.992 - - - - - - 0.992 - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
86. AL929007.1 AL929007.1 3649 0.992 - - - - - - 0.992 - -
87. ank1 ank1 5209 0.991 - - - - - - 0.991 - -
88. mdh1a mdh1a 11035 0.991 - - - - - - 0.991 - -
89. vtna ENSDARG00000055388 2635 0.99 - - - - - - 0.990 - - vitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
90. khdrbs1b ENSDARG00000070475 18157 0.988 - - - - - - 0.988 - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
91. rps11 ENSDARG00000053058 16233 0.988 - - - - - - 0.988 - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
92. nucks1a ENSDARG00000078473 28285 0.987 - - - - - - 0.987 - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
93. gart ENSDARG00000101089 6062 0.984 - - - - - - 0.984 - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
94. si:dkey-93m18.3 ENSDARG00000092664 30 0.983 0.983 - - - - - - - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
95. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 0.982 - - - - - - 0.982 - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
96. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 0.981 - - - - - - 0.981 - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
97. mapk8b ENSDARG00000009870 295 0.98 0.980 - - - - - - - - mitogen-activated protein kinase 8b [Source:ZFIN;Acc:ZDB-GENE-010202-1]
98. SYNDIG1 ENSDARG00000100751 165 0.98 - - - - - 0.980 - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
99. zgc:163143 ENSDARG00000076437 166 0.978 0.978 - - - - - - - - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
100. sdhaf1 ENSDARG00000092478 51 0.975 0.975 - - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]

There are 1219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA