Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SYDE2

Gene Name Gene ID Reads Annotation
SYDE2 ENSDARG00000099479 1891 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]










Genes with expression patterns similar to SYDE2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYDE2 ENSDARG00000099479 1891 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
2. prkar1aa ENSDARG00000076128 6565 1.718 - - 0.946 - - - 0.772 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
3. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.703 - - 0.865 - - - 0.838 - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
4. cc2d2a ENSDARG00000090971 363 1.676 0.715 - 0.961 - - - - - - coiled-coil and C2 domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2291]
5. golph3 ENSDARG00000052851, ENSDARG00000109334 2114 1.653 - 0.714 0.939 - - - - - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
6. ncoa3 ENSDARG00000077404 1957 1.638 - - 0.933 - - - 0.705 - - nuclear receptor coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-051107-8]
7. glb1l ENSDARG00000029955 736 1.62 - 0.723 0.897 - - - - - - galactosidase, beta 1-like [Source:ZFIN;Acc:ZDB-GENE-050309-196]
8. TBC1D13 815 1.616 - 0.717 0.899 - - - - - - TBC1 domain family, member 13
9. acsbg2 ENSDARG00000004094 2445 1.615 - 0.852 - - - 0.763 - - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
10. nufip2 ENSDARG00000069066 3965 1.597 - - 0.867 - - - 0.730 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
11. COLGALT1 ENSDARG00000073974 5069 1.597 - - - - - 0.759 0.838 - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
12. usp9 ENSDARG00000013708 9057 1.596 - - - - - 0.813 0.783 - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
13. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.591 - - 0.888 - - - 0.703 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
14. atp6ap1b ENSDARG00000037153 3970 1.566 - - 0.813 - - 0.753 - - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
15. wdr26b ENSDARG00000006812 2216 1.563 - 0.754 0.809 - - - - - - WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
16. ube4b ENSDARG00000037017 8012 1.56 - - - - - 0.803 0.757 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
17. RAPGEF2 ENSDARG00000005482 2068 1.559 0.766 - - - - 0.793 - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
18. atp13a atp13a 2867 1.537 - - 0.812 - - 0.725 - - -
19. bub3 ENSDARG00000075883 1333 1.537 - - 0.780 - - 0.757 - - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
20. maea ENSDARG00000053691 1840 1.532 0.810 - - - - 0.722 - - - macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
21. lamb1a ENSDARG00000101209 5396 1.532 - 0.700 0.832 - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
22. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.53 - - - - - 0.753 0.777 - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
23. tacc3 ENSDARG00000005454 2305 1.483 - - 0.772 - - - 0.711 - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
24. znf839 ENSDARG00000076988 1032 1.482 - 0.779 - - - - 0.703 - - zinc finger protein 839 [Source:ZFIN;Acc:ZDB-GENE-030131-4936]
25. calrl2 calrl2 1677 1.479 - 0.775 - - - - 0.704 - -
26. osbpl9 ENSDARG00000069298 2730 1.475 - - - - - 0.706 0.769 - - oxysterol binding protein-like 9 [Source:ZFIN;Acc:ZDB-GENE-061110-103]
27. paip2b ENSDARG00000008706 4255 1.465 - - 0.751 - - 0.714 - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
28. ptprfa ENSDARG00000103479 1250 1.456 - - - - - 0.710 0.746 - - protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
29. ift46 ENSDARG00000011240 2499 1.445 - - 0.722 - - 0.723 - - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
30. fam222bb ENSDARG00000078578 779 1.428 - - - - - 0.705 0.723 - - family with sequence similarity 222, member Bb [Source:ZFIN;Acc:ZDB-GENE-110419-4]
31. zgc:153675 ENSDARG00000071555 3769 1.414 - - - - - 0.706 0.708 - - zgc:153675 [Source:ZFIN;Acc:ZDB-GENE-061013-567]
32. hnrnpa1 hnrnpa1 1302 1.412 0.707 - - - - 0.705 - - -
33. agfg1b ENSDARG00000019526 472 0.97 - - 0.970 - - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
34. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 0.967 - - 0.967 - - - - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
35. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.966 - - 0.966 - - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
36. pelo ENSDARG00000055477 1927 0.964 - - 0.964 - - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
37. exoc2 ENSDARG00000055610, ENSDARG00000109455 950 0.962 - - 0.962 - - - - - - exocyst complex component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1160]
38. CU929394.1 CU929394.1 405 0.962 - - 0.962 - - - - - -
39. PLA2G3_1 PLA2G3_1 411 0.961 - - 0.961 - - - - - -
40. ATF6B 960 0.961 - - 0.961 - - - - - - activating transcription factor 6 beta
41. brf1a ENSDARG00000017835 206 0.96 - - 0.960 - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
42. ndst2b ENSDARG00000060678 453 0.959 - - 0.959 - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
43. rgs17 ENSDARG00000039435 590 0.959 - - 0.959 - - - - - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
44. antxr1c ENSDARG00000063612 3203 0.959 - - 0.959 - - - - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
45. msgn1 ENSDARG00000070546 188 0.958 - - 0.958 - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
46. map3k10 ENSDARG00000055672 284 0.958 - - 0.958 - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
47. CABZ01113061.1 CABZ01113061.1 51 0.958 - - 0.958 - - - - - -
48. CR942805.1 CR942805.1 94 0.958 - - 0.958 - - - - - -
49. inpp5e ENSDARG00000103926 567 0.958 - - 0.958 - - - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
50. zgc:158260 ENSDARG00000101703 103 0.958 - - 0.958 - - - - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
51. wdr66 ENSDARG00000059855 276 0.958 - - 0.958 - - - - - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
52. fat3a ENSDARG00000033840 902 0.957 - - 0.957 - - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
53. RNase_MRP RNase_MRP 118 0.957 - - 0.957 - - - - - -
54. il2rb ENSDARG00000075720 116 0.957 - - 0.957 - - - - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
55. slc35c1 ENSDARG00000104669 65 0.957 - - 0.957 - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
56. jag1b ENSDARG00000013168 1002 0.957 - - 0.957 - - - - - - jagged 1b [Source:ZFIN;Acc:ZDB-GENE-011128-4]
57. TRIM14_6 TRIM14_6 342 0.957 - - 0.957 - - - - - -
58. CMTM8 CMTM8 71 0.957 - - 0.957 - - - - - -
59. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.956 - - 0.956 - - - - - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
60. CU571255.1 CU571255.1 902 0.956 - - 0.956 - - - - - -
61. CAMSAP2 CAMSAP2 109 0.956 - - 0.956 - - - - - -
62. mxra5b ENSDARG00000076309 190 0.955 - - 0.955 - - - - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
63. rapgef1a ENSDARG00000043593 416 0.955 - - 0.955 - - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
64. F8A3 F8A3 646 0.955 - - 0.955 - - - - - -
65. GPSM3 GPSM3 257 0.954 - - 0.954 - - - - - -
66. BX649554.3_1 BX649554.3_1 1071 0.954 - - 0.954 - - - - - -
67. TRAK1 212 0.954 - - 0.954 - - - - - - trafficking protein, kinesin binding 1, transcript variant X6
68. Metazoa_SRP_8 Metazoa_SRP_8 153 0.953 - - 0.953 - - - - - -
69. zgc:153952 739 0.953 - - 0.953 - - - - - - zgc:153952, transcript variant X1
70. arhgap27 ENSDARG00000104255 439 0.953 - - 0.953 - - - - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
71. arhgap29b ENSDARG00000017748 812 0.952 - - 0.952 - - - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
72. C3H16orf58 C3H16orf58 487 0.952 - - 0.952 - - - - - -
73. suv39h1b ENSDARG00000055753 1540 0.952 - - 0.952 - - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
74. CYP27A1_1 CYP27A1_1 329 0.952 - - 0.952 - - - - - -
75. zgc:85910 zgc:85910 299 0.951 - - 0.951 - - - - - -
76. vps72 1164 0.951 - - 0.951 - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
77. rnf114 ENSDARG00000009886 725 0.951 - - 0.951 - - - - - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
78. DACT3 DACT3 766 0.95 - - 0.950 - - - - - -
79. b3gnt2b ENSDARG00000091902 4125 0.95 - - 0.950 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
80. CABZ01073032.1 CABZ01073032.1 125 0.95 - - 0.950 - - - - - -
81. herc2 ENSDARG00000073841 486 0.95 - - 0.950 - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
82. zgc:66484 ENSDARG00000030478 167 0.95 - - 0.950 - - - - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
83. pcdh8 ENSDARG00000006467 317 0.95 - - 0.950 - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
84. TATDN3 ENSDARG00000044072 914 0.949 - - 0.949 - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
85. fzd2 ENSDARG00000054438 585 0.949 - - 0.949 - - - - - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]
86. trub2 ENSDARG00000028379 783 0.948 - - 0.948 - - - - - - TruB pseudouridine (psi) synthase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040704-41]
87. rcbtb2 ENSDARG00000090687 1658 0.948 - - 0.948 - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
88. twist2 ENSDARG00000078266 499 0.948 - - 0.948 - - - - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
89. snf8 ENSDARG00000058076 384 0.948 - - 0.948 - - - - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
90. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.947 - - 0.947 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
91. zgc:113265 318 0.947 - - 0.947 - - - - - - zgc:113265, transcript variant X3
92. FBLN1 ENSDARG00000103311 877 0.947 - - 0.947 - - - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
93. hoxa5a ENSDARG00000102501 1667 0.946 - - 0.946 - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
94. MSR1 MSR1 449 0.946 - - 0.946 - - - - - -
95. hsf1 ENSDARG00000008818 491 0.945 - - 0.945 - - - - - - heat shock transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-16]
96. dact1 ENSDARG00000101635 1303 0.945 - - 0.945 - - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
97. CABZ01073174.1 CABZ01073174.1 581 0.945 - - 0.945 - - - - - -
98. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 0.945 - - 0.945 - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
99. mphosph10 ENSDARG00000012495 1679 0.944 - - 0.944 - - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
100. asap2b ENSDARG00000019564 1660 0.944 - - 0.944 - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]

There are 853 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA