Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMARCA4

Gene Name Gene ID Reads Annotation
SMARCA4 ENSDARG00000104339 48 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]










Genes with expression patterns similar to SMARCA4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMARCA4 ENSDARG00000104339 48 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
2. rassf4 ENSDARG00000012460 43 2.935 - 1.000 - 0.935 - - 1.000 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
3. si:dkey-193c22.1 ENSDARG00000093687 104 2.771 - 1.000 - - - 0.771 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
4. pdzd4 175 2.757 - 1.000 - - - 0.843 0.914 - - PDZ domain containing 4, transcript variant X2
5. pcbp3 ENSDARG00000054378 74 2.586 - 1.000 - - 0.744 - 0.842 - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
6. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 2.553 - 1.000 - - - 0.710 0.843 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
7. BX927122.3 BX927122.3 19 2.544 - 1.000 0.827 - - 0.717 - - -
8. SAMD14 145 2.519 - - - 0.739 - 0.795 0.985 - - sterile alpha motif domain containing 14, transcript variant X3
9. mb21d2a mb21d2a 421 2.511 - 0.835 - - - 0.785 0.891 - -
10. elavl4 ENSDARG00000045639 998 2.478 - 0.794 - - - 0.898 0.786 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
11. cldnd ENSDARG00000006580 17 2 - 1.000 - - - - 1.000 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
12. cdk5r1a ENSDARG00000037916 46 2 - 1.000 - - - - 1.000 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
13. plscr3a ENSDARG00000093078 7 2 - 1.000 - - - - 1.000 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
14. mei4 ENSDARG00000043912 10 1.962 - - - 0.962 - - 1.000 - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
15. arl11l arl11l 31 1.958 - - 0.958 - - - 1.000 - -
16. CIR1 ENSDARG00000099733 66 1.954 - 1.000 - 0.954 - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
17. amy2a ENSDARG00000013856 13 1.947 - 1.000 0.947 - - - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
18. msgn1 ENSDARG00000070546 188 1.942 0.942 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
19. si:dkey-233h12.4 si:dkey-233h12.4 2 1.942 0.942 - - - - - 1.000 - -
20. PFKL PFKL 9 1.942 0.942 - - - - - 1.000 - -
21. slc5a9 ENSDARG00000005518 16 1.942 0.942 - - - - - 1.000 - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
22. si:dkey-85k15.4 ENSDARG00000095047 25 1.942 0.942 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
23. erap2 ENSDARG00000098618 16 1.929 - 1.000 - - - - 0.929 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
24. def6a ENSDARG00000012247 20 1.927 - - 0.927 - - - 1.000 - - differentially expressed in FDCP 6a homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1246]
25. si:ch211-152l15.4 si:ch211-152l15.4 13 1.925 - 1.000 0.925 - - - - - -
26. CR626874.1 ENSDARG00000100141 55 1.914 - 1.000 0.914 - - - - - -
27. chrna6 ENSDARG00000055559 60 1.894 - 1.000 - - - 0.894 - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
28. fez1 ENSDARG00000023174 701 1.889 - 1.000 - - - - 0.889 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
29. LMTK3 LMTK3 222 1.884 - 1.000 - - - - 0.884 - -
30. cacng2a ENSDARG00000032565 99 1.882 - 1.000 - - - - 0.882 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
31. pigf ENSDARG00000032780 7 1.88 - 0.880 - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
32. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.876 - 1.000 - 0.876 - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
33. si:ch211-241e1.5 ENSDARG00000008906 70 1.876 0.942 - 0.934 - - - - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
34. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.873 - 1.000 - - - - 0.873 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
35. zgc:153615 ENSDARG00000038981 105 1.846 - 1.000 - - - - 0.846 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
36. evx2 ENSDARG00000059255 317 1.845 - - - - - 0.856 0.989 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
37. kcnd1 ENSDARG00000074746 153 1.837 - - - - - 0.862 0.975 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
38. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1.832 0.942 - - 0.890 - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
39. BX470131.1 BX470131.1 86 1.828 - 1.000 - - - - 0.828 - -
40. arhgef9a ENSDARG00000061746 58 1.828 - 1.000 - - - - 0.828 - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
41. TMEM57 TMEM57 260 1.82 - 1.000 - - - - 0.820 - -
42. tmem178b ENSDARG00000006747 173 1.82 - - - - - 0.872 0.948 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
43. sorcs3b ENSDARG00000077349 72 1.818 0.942 - - - - 0.876 - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
44. got1l1 ENSDARG00000053644 49 1.811 0.894 - 0.917 - - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
45. ZNF337_16 ZNF337_16 22 1.81 0.810 1.000 - - - - - - -
46. penka ENSDARG00000004869 161 1.809 - - - - - 0.917 0.892 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
47. GAS2 18 1.806 - 1.000 - - 0.806 - - - - growth arrest specific 2, transcript variant X1
48. PRR12 PRR12 38 1.805 - 1.000 - - - 0.805 - - -
49. FGFBP3 FGFBP3 993 1.804 - - - - - 0.903 0.901 - -
50. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.803 - - - - - 0.877 0.926 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
51. dtnbp1b ENSDARG00000055206 64 1.799 - - - - - 0.846 0.953 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
52. lhx5 ENSDARG00000057936 785 1.798 - 1.000 - - - - 0.798 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
53. gpr61 ENSDARG00000055570 128 1.795 - 1.000 - - - 0.795 - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
54. cacna1g ENSDARG00000089913 19 1.795 - - - - - 0.795 1.000 - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:ZFIN;Acc:ZDB-GENE-090514-2]
55. ntng2a ENSDARG00000077367 43 1.795 - - - - - 0.795 1.000 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
56. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.795 - - - - - 0.836 0.959 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
57. SNORD30 SNORD30 34 1.792 - 1.000 - - 0.792 - - - -
58. gpr22 gpr22 115 1.791 - - - 0.949 - - 0.842 - -
59. si:ch211-273j9.2 si:ch211-273j9.2 79 1.778 0.942 - 0.836 - - - - - -
60. DOCK4 DOCK4 78 1.776 - 1.000 - - - - 0.776 - -
61. tlx2 ENSDARG00000011273 870 1.775 - - - - - 0.901 0.874 - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
62. lhfpl4a ENSDARG00000111810 206 1.772 - 0.875 - - - - 0.897 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
63. lingo1a ENSDARG00000034165 179 1.765 - - - 0.801 - - 0.964 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
64. GADD45G_1 GADD45G_1 236 1.763 - 1.000 - - - 0.763 - - -
65. KCNB2 ENSDARG00000088842 35 1.763 - - - 0.958 - 0.805 - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
66. trim36 ENSDARG00000062794 785 1.761 - - - 0.828 - 0.933 - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
67. sdr42e1 ENSDARG00000098838 25 1.752 - - 0.949 - 0.803 - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
68. rab11bb_1 ENSDARG00000090086 7 1.749 0.749 - - - - - 1.000 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
69. GPRIN3 GPRIN3 169 1.746 - - - 0.855 - 0.891 - - -
70. fam43b ENSDARG00000070222 92 1.744 - 1.000 - - - 0.744 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
71. prdm14 ENSDARG00000045371 106 1.738 - - - - - 0.738 1.000 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
72. bhlhe22 ENSDARG00000058039 1673 1.731 - 0.954 - - - - 0.777 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
73. ROBO3_1 ROBO3_1 468 1.727 - 0.893 - - - - 0.834 - -
74. si:dkeyp-69c1.7 ENSDARG00000087165 31 1.724 - - - - - 0.724 1.000 - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
75. LRIF1_1 LRIF1_1 228 1.723 - - - 0.723 - - 1.000 - -
76. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.719 - - - - - 0.719 1.000 - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
77. GABRA3 ENSDARG00000090883 5 1.717 - 1.000 - - - 0.717 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
78. vwc2 ENSDARG00000076495 22 1.717 - - - - - 0.717 1.000 - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
79. si:ch211-76l23.5 si:ch211-76l23.5 26 1.717 - - - - - 0.717 1.000 - -
80. gng2 ENSDARG00000056831 81 1.717 - - - - - 0.717 1.000 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
81. si:ch211-243a22.1 si:ch211-243a22.1 42 1.717 - 1.000 - - - 0.717 - - -
82. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.717 - - - - - 0.717 1.000 - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
83. LRRK1_1 LRRK1_1 11 1.717 - 1.000 - - - 0.717 - - -
84. PCDH10 PCDH10 7 1.717 - 1.000 - - - 0.717 - - -
85. mir124-6 64 1.717 - - - - - 0.717 1.000 - - microRNA 124-6
86. pcyt1ba ENSDARG00000058162 206 1.717 - 1.000 - - - 0.717 - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
87. si:dkey-15f23.2 si:dkey-15f23.2 2 1.717 - - - - - 0.717 1.000 - -
88. si:ch211-108c6.2 14 1.717 - 1.000 - - - 0.717 - - - si:ch211-108c6.2
89. nid2b ENSDARG00000009471 4 1.717 - 1.000 - - - 0.717 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
90. SLITRK3 SLITRK3 24 1.715 - - - - - 0.833 0.882 - -
91. C17H15orf41 C17H15orf41 313 1.713 - 0.843 - 0.870 - - - - -
92. nebl ENSDARG00000021200 40 1.706 - - - - - 0.706 1.000 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
93. slco4a1 ENSDARG00000075948 74 1.706 - - - - - 0.706 1.000 - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
94. RAPGEF4 ENSDARG00000079872 82 1.701 - 1.000 - - - 0.701 - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
95. si:dkey-17e6.2 si:dkey-17e6.2 72 1.699 - - - 0.942 - - 0.757 - -
96. INA INA 950 1.698 - - - - - 0.766 0.932 - -
97. syt4 ENSDARG00000036505 421 1.698 - - - - - 0.743 0.955 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
98. sypb ENSDARG00000002230 262 1.696 - - - - - 0.852 0.844 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
99. fgf13b ENSDARG00000056633 455 1.689 - - - - - 0.839 0.850 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
100. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.685 - - - - - 0.730 0.955 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]

There are 1977 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA