Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PCBP4

Gene Name Gene ID Reads Annotation
PCBP4 ENSDARG00000024276 3194 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]










Genes with expression patterns similar to PCBP4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PCBP4 ENSDARG00000024276 3194 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
2. aplp1 ENSDARG00000098368 2317 3.249 0.770 0.741 - - - - 0.996 - 0.742 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
3. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 2.755 - - - - 0.768 0.991 0.996 - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
4. kpna2 ENSDARG00000038066 7954 2.737 - - 0.769 - - 0.975 0.993 - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
5. ppp2r5eb ENSDARG00000069118 1902 2.736 - - 0.976 - - 0.996 - 0.764 - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
6. TUBB8P7_1 TUBB8P7_1 2722 2.547 0.769 0.823 0.955 - - - - - -
7. rbm39b ENSDARG00000041853 1421 2.527 - - 0.984 - 0.751 - - 0.792 - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
8. CABZ01087568.1 CABZ01087568.1 1487 2.506 - 0.748 0.975 - 0.783 - - - -
9. zswim5 ENSDARG00000055900 4243 2.32 - - 0.889 - 0.729 - - - 0.702 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
10. AGO1 ENSDARG00000092644 4521 2.223 0.756 0.766 - - - - - - 0.701 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
11. gap43 ENSDARG00000099744 4114 2.218 0.745 0.727 - - - - - - 0.746 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
12. lfng ENSDARG00000037879 11783 2.186 0.708 0.767 - - - - - - 0.711 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
13. SV2A ENSDARG00000059945 1278 2.145 0.741 0.703 - - - - - - 0.701 synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
14. zgc:195001 ENSDARG00000070484 3281 1.97 - - 0.975 - - 0.995 - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
15. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 1.949 - - - - - 0.961 0.988 - - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
16. lin54 ENSDARG00000063194 2583 1.846 - - 0.978 - - - - 0.868 - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
17. dtna ENSDARG00000031015 1746 1.842 - 0.846 - - - - 0.996 - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
18. dnajc5aa ENSDARG00000042948 2885 1.835 0.876 - 0.959 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
19. MAF1 ENSDARG00000013122 6899 1.831 - - - - - - 0.993 0.838 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
20. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.81 - 0.814 - - - 0.996 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
21. ahi1 ENSDARG00000044056 951 1.802 - - 0.966 - - - - 0.836 - Abelson helper integration site 1 [Source:ZFIN;Acc:ZDB-GENE-060803-1]
22. pou3f3a ENSDARG00000042032 2835 1.785 - - 0.932 - - - - 0.853 - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
23. GTSE1 ENSDARG00000013719 1115 1.784 - - 0.970 - 0.814 - - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
24. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.775 - - 0.781 - - - 0.994 - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
25. prx ENSDARG00000017246 6183 1.77 - 0.794 - - - 0.976 - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
26. ddx27 ENSDARG00000091831 1471 1.769 - - 0.974 - 0.795 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
27. TUBGCP6 1991 1.768 - - 0.977 - 0.791 - - - - tubulin, gamma complex associated protein 6
28. CT990561.1 ENSDARG00000058284 566 1.766 - - 0.933 - - - - 0.833 - EPH receptor A5 [Source:NCBI gene;Acc:797595]
29. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.762 - 0.768 - - - 0.994 - - -
30. exosc6 ENSDARG00000036060, ENSDARG00000115735 531 1.759 - - 0.967 - - - - 0.792 - exosome component 6 [Source:ZFIN;Acc:ZDB-GENE-050522-362]
31. CCDC86 CCDC86 2023 1.757 - 0.764 - - - 0.993 - - -
32. tfap4 ENSDARG00000103923 2203 1.75 - - 0.967 - 0.783 - - - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
33. hapln1a ENSDARG00000089769 12334 1.75 - 0.815 - - - 0.935 - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
34. MYOM1 MYOM1 3870 1.747 - 0.775 - - - 0.972 - - -
35. arf6a ENSDARG00000101626 2959 1.742 - - - - 0.742 - 1.000 - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
36. hoxc3a ENSDARG00000070339 3379 1.735 0.742 - - - - 0.993 - - - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
37. cbsa ENSDARG00000053500, ENSDARG00000112676 792 1.734 - 0.738 - - - 0.996 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
38. ttc3 ENSDARG00000086075 2157 1.733 - - 0.971 - 0.762 - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
39. wnk1b ENSDARG00000039392 3587 1.732 - 0.761 0.971 - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
40. kera ENSDARG00000056938 2434 1.728 - 0.746 - - - 0.982 - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
41. mycla ENSDARG00000006003 1866 1.724 - - - - 0.812 - - 0.912 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
42. srl ENSDARG00000104587 11126 1.722 - 0.760 - - - 0.962 - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
43. TMPO TMPO 3264 1.72 - 0.739 - - - 0.981 - - -
44. mgaa ENSDARG00000078784 1344 1.717 - - 0.980 - 0.737 - - - - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
45. tmed10 ENSDARG00000041391, ENSDARG00000110672 23599 1.716 - - 0.725 - - 0.991 - - - transmembrane p24 trafficking protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4915]
46. rexo1 ENSDARG00000026986 770 1.716 - - 0.980 - - - - - 0.736 REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
47. PIK3CA_1 PIK3CA_1 4065 1.714 - - - - 0.716 0.998 - - -
48. Sep-06 Sep-06 5465 1.708 - - - - - 0.993 - - 0.715
49. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.707 - 0.709 - - - 0.998 - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
50. yaf2 ENSDARG00000015966 1905 1.705 - - 0.965 - - - - - 0.740 YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
51. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 1.702 - 0.711 - - - 0.991 - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
52. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.702 - 0.711 - - - 0.991 - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
53. stxbp1a ENSDARG00000001994 5154 1.7 - 0.743 0.957 - - - - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
54. clvs2 ENSDARG00000053122 1390 1.699 0.701 - - - - 0.998 - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
55. zranb2 ENSDARG00000044332 6723 1.698 - - 0.979 - - - - - 0.719 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
56. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.698 0.702 - - - - - 0.996 - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
57. kdm5c ENSDARG00000006124 4389 1.698 - - 0.880 - 0.818 - - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
58. zmat5 ENSDARG00000035434 983 1.698 - - 0.971 0.727 - - - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
59. ubl3b ENSDARG00000021556 1210 1.694 - - 0.979 - - - - 0.715 - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
60. hrasb ENSDARG00000005651 662 1.692 - 0.718 0.974 - - - - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
61. eif4g2b ENSDARG00000057167 22982 1.69 0.703 - - - - - 0.987 - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
62. ccdc85ca ENSDARG00000005232 3218 1.686 0.738 - 0.948 - - - - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
63. fam203a fam203a 570 1.686 - 0.705 0.981 - - - - - -
64. sema6a ENSDARG00000102165 1401 1.683 - - 0.976 - - - - - 0.707 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
65. snai1b ENSDARG00000046019 886 1.683 - 0.711 0.972 - - - - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
66. xpo1b ENSDARG00000063229 2529 1.68 - - 0.963 - 0.717 - - - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
67. lgals1l1 ENSDARG00000088711 4515 1.678 - 0.782 0.896 - - - - - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
68. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.667 - - - - 0.848 - - 0.819 - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
69. rbm25 rbm25 3629 1.659 - - 0.924 - - - - - 0.735
70. ctsf ENSDARG00000063095 4564 1.651 - - 0.929 - 0.722 - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
71. znf827 ENSDARG00000076171 6304 1.633 - - - - - - 0.933 - 0.700 zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
72. rtf1 ENSDARG00000008947 6596 1.633 - - 0.854 - 0.779 - - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
73. TNRC6C_1 TNRC6C_1 6574 1.624 - 0.761 0.863 - - - - - -
74. si:dkey-226l10.6 ENSDARG00000087483 1651 1.622 - - - - 0.823 - - 0.799 - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
75. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.622 - 0.791 - - - - - 0.831 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
76. utp23 ENSDARG00000105012 1346 1.617 - - - - 0.769 - - 0.848 - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
77. eif3m ENSDARG00000013931 8117 1.613 - 0.777 0.836 - - - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
78. dctd ENSDARG00000036990 2168 1.611 - - - - 0.802 - - 0.809 - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
79. dut ENSDARG00000106529 3120 1.609 - - 0.907 - 0.702 - - - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
80. nr2f1a ENSDARG00000052695 5037 1.594 - - 0.862 - - - - - 0.732 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
81. hey2 ENSDARG00000013441 540 1.592 - 0.787 - - - - - 0.805 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
82. eif4h ENSDARG00000042252 6742 1.587 - - 0.834 - - - - - 0.753 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
83. slc1a3a ENSDARG00000104431 9888 1.581 0.776 0.805 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
84. mrps23 ENSDARG00000033973 2265 1.573 - 0.747 - - 0.826 - - - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
85. zic2a ENSDARG00000015554 2860 1.568 0.729 - 0.839 - - - - - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
86. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.566 - - 0.852 - - - - - 0.714 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
87. vamp1 ENSDARG00000031283 3094 1.565 0.738 0.827 - - - - - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
88. kif5bb 1645 1.562 - 0.847 - - - - - - 0.715 kinesin family member 5B, b
89. CABZ01080568.2 CABZ01080568.2 2137 1.56 - - - - 0.850 - - - 0.710
90. strn3 ENSDARG00000001729 4608 1.557 - - - - 0.824 - - 0.733 - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
91. ELOVL4 ELOVL4 3026 1.553 0.793 - - - - - - - 0.760
92. atl1 ENSDARG00000060481 251 1.553 0.749 - - - - - - 0.804 - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
93. gng3 ENSDARG00000009553 2530 1.551 0.772 - - - 0.779 - - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
94. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.551 - - - - 0.804 - - 0.747 - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
95. dnaja2l ENSDARG00000010745 2367 1.55 0.842 0.708 - - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
96. dld ENSDARG00000020219 4928 1.549 0.722 0.827 - - - - - - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
97. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.547 0.701 - 0.846 - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
98. mybbp1a ENSDARG00000078214 2458 1.541 - 0.769 - - 0.772 - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
99. msi1 ENSDARG00000010710 2634 1.541 0.714 0.827 - - - - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
100. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.533 - - - - - - - 0.766 0.767 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]

There are 1655 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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