Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for MSI1

Gene Name Gene ID Reads Annotation
MSI1 ENSDARG00000010710 478 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]










Genes with expression patterns similar to MSI1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MSI1 ENSDARG00000010710 478 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
2. gipc1 ENSDARG00000104483 2913 2.264 - - 0.720 - - 0.769 0.775 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
3. zgc:152938 ENSDARG00000102586 97 1.815 0.854 0.961 - - - - - - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
4. CABZ01071909.1_1 ENSDARG00000117524 86 1.723 0.787 0.936 - - - - - - -
5. si:dkeyp-52c3.2 ENSDARG00000070516 92 1.715 0.777 0.938 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
6. plekha3 ENSDARG00000056601 213 1.697 0.809 0.888 - - - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
7. itsn1 ENSDARG00000000086 684 1.696 - 0.971 - - - - - 0.725 - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
8. zgc:113294 ENSDARG00000032285 132 1.69 0.853 - - - - - - 0.837 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
9. tango6 ENSDARG00000034001 203 1.688 0.755 0.933 - - - - - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
10. tspan5a ENSDARG00000086033 1865 1.665 - 0.855 - - - 0.810 - - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
11. ctbp2 ctbp2 3255 1.634 - 0.881 - - - 0.753 - - -
12. CCDC30 ENSDARG00000056961 178 1.616 0.820 - - - - - 0.796 - - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
13. rsrc1 ENSDARG00000033987 552 1.596 - 0.751 - - - - - 0.845 - arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374]
14. tmtc2 tmtc2 798 1.596 - - - - - 0.772 - 0.824 -
15. GPRIN3 GPRIN3 169 1.583 - - - - - - 0.747 0.836 -
16. cited4b ENSDARG00000101009, ENSDARG00000114241 3632 1.58 - 0.810 - - - 0.770 - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b [Source:ZFIN;Acc:ZDB-GENE-030425-5]
17. slc9a8 ENSDARG00000020699 206 1.578 0.738 - - - - - - 0.840 - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
18. cldn19 ENSDARG00000044569 281 1.575 - - - - - 0.778 0.797 - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
19. slc9a7 ENSDARG00000076754 599 1.574 - 0.835 - - - 0.739 - - - solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 [Source:ZFIN;Acc:ZDB-GENE-050913-8]
20. map2k7 ENSDARG00000008279 285 1.567 - 0.792 - - - - 0.775 - - mitogen-activated protein kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-090312-186]
21. her12 ENSDARG00000032963 754 1.544 - 0.806 - - - 0.738 - - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
22. CU019646.1 ENSDARG00000117632 223 1.535 0.782 - - - - - - 0.753 - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
23. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.529 - - - - - 0.795 0.734 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
24. tprg1l ENSDARG00000068149 1605 1.528 - 0.719 - - - 0.809 - - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
25. TDG TDG 1191 1.527 - - - - - 0.823 0.704 - -
26. GSG2 GSG2 1162 1.526 0.754 - - - - - - 0.772 -
27. C2H1orf21 C2H1orf21 1120 1.526 - 0.758 - - - 0.768 - - -
28. nlgn3b ENSDARG00000062376 171 1.516 - - - - - - 0.709 0.807 - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
29. pacsin1b ENSDARG00000042128 1051 1.506 - - - - - 0.778 0.728 - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
30. ZFHX3 ENSDARG00000103057 7759 1.503 - - 0.734 - - 0.769 - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
31. cenpo ENSDARG00000075619, ENSDARG00000111160 378 1.503 0.782 - - - - - - 0.721 - centromere protein O [Source:ZFIN;Acc:ZDB-GENE-070928-16]
32. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.498 - - - - - 0.761 0.737 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
33. EFCC1 ENSDARG00000077826 1359 1.496 - 0.730 - - - 0.766 - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
34. JPH3 ENSDARG00000102204 283 1.496 - - - - - 0.726 0.770 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
35. dpysl5a ENSDARG00000011141 1827 1.495 - - 0.737 - - 0.758 - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
36. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.489 - - - - - 0.774 0.715 - -
37. CR384099.1 ENSDARG00000089193 193 1.48 - - - - - 0.700 0.780 - -
38. caly ENSDARG00000036008 1002 1.475 - 0.709 - - - 0.766 - - - calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
39. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.47 - - 0.758 - - 0.712 - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
40. si:ch73-21g5.7 ENSDARG00000093156 9412 1.467 - - 0.702 - - 0.765 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
41. adam11 ENSDARG00000079204 298 1.466 - - - - - 0.763 0.703 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
42. rusc1 ENSDARG00000078125 617 1.466 - - - - - 0.759 0.707 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
43. pou3f3a ENSDARG00000042032 2835 1.461 - - - - - 0.743 - - 0.718 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
44. myoc ENSDARG00000021789 1631 1.457 - 0.705 - - - 0.752 - - - myocilin [Source:ZFIN;Acc:ZDB-GENE-050425-2]
45. TUSC5 TUSC5 1436 1.456 - - - - - 0.724 0.732 - -
46. ptbp2b ENSDARG00000015901 2458 1.455 - - - - - 0.746 0.709 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
47. negr1 ENSDARG00000021607 1051 1.453 - - - 0.740 - 0.713 - - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
48. sh3gl2 sh3gl2 1305 1.452 - - - - - 0.733 0.719 - -
49. scn8aa ENSDARG00000005775 792 1.451 - - - - - 0.747 0.704 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
50. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 1.451 - - - - - 0.700 - 0.751 - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
51. slc35e3 ENSDARG00000045493, ENSDARG00000114987 1110 1.45 - 0.747 - - - - - 0.703 - solute carrier family 35, member E3 [Source:ZFIN;Acc:ZDB-GENE-041210-186]
52. sez6l2 ENSDARG00000076052 360 1.447 - - - - - 0.744 0.703 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
53. CACFD1 ENSDARG00000090818 1298 1.445 - 0.732 - - - - 0.713 - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
54. tmpob ENSDARG00000022978 8121 1.437 - - 0.702 - - 0.735 - - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
55. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1.433 0.711 - - - - 0.722 - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
56. snap25b ENSDARG00000058117 469 1.425 - - - - - 0.712 0.713 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
57. cry1b cry1b 152 0.98 - 0.980 - - - - - - -
58. tctex1d2 ENSDARG00000054255 320 0.979 - 0.979 - - - - - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
59. mettl6 ENSDARG00000070085 366 0.977 - 0.977 - - - - - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
60. THEM6_1 ENSDARG00000103914 469 0.97 - 0.970 - - - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
61. sfmbt2 ENSDARG00000045519 251 0.969 - 0.969 - - - - - - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
62. nkx2.2b ENSDARG00000101549 266 0.969 - 0.969 - - - - - - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
63. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.967 - 0.967 - - - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
64. CR354432.1 CR354432.1 424 0.966 - 0.966 - - - - - - -
65. CU855953.1 CU855953.1 137 0.965 - 0.965 - - - - - - -
66. sdk1a ENSDARG00000078866 159 0.964 - 0.964 - - - - - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
67. abcb8 ENSDARG00000056672 589 0.964 - 0.964 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050410-6]
68. btbd9 ENSDARG00000068983 356 0.963 - 0.963 - - - - - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
69. si:ch211-279m15.1 si:ch211-279m15.1 67 0.963 - 0.963 - - - - - - -
70. TC2N ENSDARG00000095067 146 0.962 - 0.962 - - - - - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
71. pdcd2l ENSDARG00000002754 417 0.962 - 0.962 - - - - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
72. dre-mir-222a ENSDARG00000090347 131 0.961 - 0.961 - - - - - - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
73. dolpp1 ENSDARG00000036915 114 0.96 - 0.960 - - - - - - - dolichyldiphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-041024-11]
74. CR318593.1 CR318593.1 290 0.96 - 0.960 - - - - - - -
75. plekha7a ENSDARG00000060813 179 0.959 - 0.959 - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
76. ddrgk1_1 ENSDARG00000037172 1563 0.959 - 0.959 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
77. C17H2orf43 C17H2orf43 379 0.958 - 0.958 - - - - - - -
78. GFRAL ENSDARG00000089709 167 0.958 - 0.958 - - - - - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
79. si:ch211-255g12.8 ENSDARG00000069627 22 0.958 - 0.958 - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
80. si:ch211-236p5.2 ENSDARG00000086256 8 0.958 - 0.958 - - - - - - - si:ch211-236p5.2 [Source:ZFIN;Acc:ZDB-GENE-081028-33]
81. dpt ENSDARG00000056178 7 0.957 - 0.957 - - - - - - - dermatopontin [Source:ZFIN;Acc:ZDB-GENE-060312-9]
82. slc43a3b ENSDARG00000057949 194 0.957 - 0.957 - - - - - - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
83. SNORA53 SNORA53 10 0.957 - 0.957 - - - - - - -
84. grip2b ENSDARG00000027618 9 0.957 - 0.957 - - - - - - - glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
85. BX004816.4 BX004816.4 33 0.957 - 0.957 - - - - - - -
86. dio2 ENSDARG00000094857 17 0.957 - 0.957 - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
87. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 0.957 - 0.957 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
88. elavl2 ENSDARG00000040732 44 0.957 - 0.957 - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
89. CU929163.1 CU929163.1 11 0.957 - 0.957 - - - - - - -
90. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.957 - 0.957 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
91. si:ch211-227e10.1 ENSDARG00000103197, ENSDARG00000104968 6 0.957 - 0.957 - - - - - - - si:ch211-227e10.1 [Source:ZFIN;Acc:ZDB-GENE-050420-221]
92. klhdc8b ENSDARG00000090787 33 0.957 - 0.957 - - - - - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
93. vhl ENSDARG00000070617 663 0.957 - 0.957 - - - - - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
94. CABZ01081656.1 CABZ01081656.1 14 0.957 - 0.957 - - - - - - -
95. si:dkey-173l11.3 si:dkey-173l11.3 14 0.957 - 0.957 - - - - - - -
96. si:ch211-284e13.4 ENSDARG00000060330 6 0.957 - 0.957 - - - - - - - si:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
97. si:dkey-192i18.3 si:dkey-192i18.3 47 0.957 - 0.957 - - - - - - -
98. GPR97 GPR97 9 0.957 - 0.957 - - - - - - -
99. wdyhv1 ENSDARG00000070403 42 0.957 - 0.957 - - - - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
100. tmprss13a ENSDARG00000100969 84 0.957 - 0.957 - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]

There are 1314 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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