Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for BX004880.1

Gene Name Gene ID Reads Annotation
BX004880.1 BX004880.1 638










Genes with expression patterns similar to BX004880.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. BX004880.1 BX004880.1 638 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. selt1b 1396 1.896 0.989 - - - - - - - 0.907 selenoprotein T, 1b
3. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.896 0.988 - - - - - - - 0.908 GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
4. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.853 0.956 - - - - - - - 0.897 pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
5. fam3c ENSDARG00000056152 3833 1.824 0.895 - - - - - - - 0.929 family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
6. tctex1d1 ENSDARG00000103545 409 1.813 0.986 - - - - - - 0.827 - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
7. chid1 ENSDARG00000069673 675 1.81 - - - - - - 0.864 - 0.946 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
8. mgat1a ENSDARG00000012407 605 1.8 0.986 - - - - 0.814 - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]
9. ppp4cb ENSDARG00000076439 1693 1.8 0.960 - - - - - - - 0.840 protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
10. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.788 0.951 - - - - - - - 0.837 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
11. rnf146 ENSDARG00000089981 715 1.76 0.963 - - - - - - 0.797 - ring finger protein 146 [Source:ZFIN;Acc:ZDB-GENE-030131-5997]
12. ythdf3 ENSDARG00000057939 475 1.755 - - - - - - 0.814 - 0.941 YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
13. CT030712.1 ENSDARG00000044355 83 1.755 - - - - - 0.805 - - 0.950 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
14. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 1.751 - - - - - 0.817 - - 0.934 peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
15. calhm2 ENSDARG00000039482 138 1.731 - - - - - 0.785 - - 0.946 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
16. immt ENSDARG00000102874 3435 1.726 0.951 - - - - - - - 0.775 inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
17. slc22a2 ENSDARG00000030530 313 1.723 0.986 - - - - 0.737 - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
18. epas1b ENSDARG00000057671, ENSDARG00000113561, ENSDARG00000115742 1306 1.72 0.976 0.744 - - - - - - - endothelial PAS domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-060607-11]
19. MIS12 ENSDARG00000026454 649 1.715 - - - - - 0.812 - - 0.903 MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
20. cbx3b ENSDARG00000092158 1976 1.714 0.980 - - - - - - 0.734 - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
21. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.713 - - - - - 0.793 - - 0.920 ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
22. calr ENSDARG00000076290 13987 1.702 0.872 - - - - - - 0.830 - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
23. lrp1bb ENSDARG00000061517 172 1.701 - - 0.759 - - - - - 0.942 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
24. lmbrd1 ENSDARG00000104223 924 1.692 - - - - - 0.802 - - 0.890 LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
25. chst14 ENSDARG00000043011 345 1.692 0.987 - - 0.705 - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
26. hoxb7a ENSDARG00000056030 1212 1.689 0.978 - - - - 0.711 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
27. scinla ENSDARG00000102415, ENSDARG00000117110 1996 1.687 0.985 - - - - - 0.702 - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
28. NUP85 ENSDARG00000098679 804 1.678 0.961 0.717 - - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
29. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.676 - - - - - 0.763 - - 0.913 zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
30. erbb3a ENSDARG00000006202 903 1.676 - - 0.737 - - - - - 0.939 erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
31. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.674 - - - - - - 0.755 - 0.919 calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
32. ACBD3 ENSDARG00000042623 159 1.668 - - - 0.719 - - - - 0.949 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
33. CR848664.2 CR848664.2 876 1.667 - - - - - 0.782 - - 0.885
34. BX296538.3 BX296538.3 813 1.664 - - - - - - - 0.801 0.863
35. BACH1 BACH1 1021 1.656 - - - - - 0.776 - - 0.880
36. yif1a ENSDARG00000019636 2215 1.635 - - - - - - - 0.748 0.887 Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
37. gnav1 ENSDARG00000043006 305 1.629 - - - - - 0.825 - 0.804 - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
38. aldh3a2a ENSDARG00000028259 591 1.621 - - 0.792 - - - - 0.829 - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
39. sall4 ENSDARG00000044485 1694 1.613 - - - - - 0.759 - - 0.854 spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
40. adrbk2 1037 1.612 - - - 0.736 - - - - 0.876 adrenergic, beta, receptor kinase 2, transcript variant X1
41. cblb ENSDARG00000015199, ENSDARG00000116429 1129 1.605 - - - - - 0.865 0.740 - - Cbl proto-oncogene B, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-417]
42. gpr22 gpr22 115 1.596 - - - 0.780 - - - 0.816 -
43. ppfibp2b ENSDARG00000029168 961 1.596 - - - 0.767 - 0.829 - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
44. CU074314.1 CU074314.1 354 1.594 - - - - - - 0.782 0.812 -
45. ism1 ENSDARG00000020541 1241 1.592 - - - - - - - 0.726 0.866 isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
46. tbc1d5 ENSDARG00000036212 2580 1.591 - - - - - 0.811 - - 0.780 TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
47. CU463790.1 CU463790.1 60 1.591 - - - 0.792 - 0.799 - - -
48. ponzr2 ENSDARG00000088539, ENSDARG00000113036 163 1.586 - - 0.731 - - - - 0.855 - plac8 onzin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-050411-41]
49. abcb7 ENSDARG00000062795 1404 1.585 - - - - - 0.710 - - 0.875 ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
50. dhrs7 ENSDARG00000003444 812 1.582 - - - - - 0.751 0.831 - - dehydrogenase/reductase (SDR family) member 7 [Source:ZFIN;Acc:ZDB-GENE-060825-21]
51. atp2b1b ENSDARG00000007788 56 1.578 - - - 0.771 - - - 0.807 - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
52. ric8a ENSDARG00000007247 229 1.573 - - - - - 0.754 - 0.819 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
53. slc25a21 ENSDARG00000060564 344 1.573 - - - - - 0.743 - 0.830 - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
54. CR387996.1 ENSDARG00000097774 3037 1.573 - - - - - 0.838 - - 0.735
55. slc7a10a ENSDARG00000008100 178 1.571 - - - - - 0.867 0.704 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
56. BX005368.2 BX005368.2 702 1.569 - - - - - 0.764 - 0.805 -
57. SFT2D2 SFT2D2 431 1.568 - - - - - 0.745 - 0.823 -
58. fam53b ENSDARG00000016156 2143 1.563 - - - - - 0.807 - - 0.756 family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
59. MAP1S_1 MAP1S_1 1117 1.562 - - - 0.772 - - 0.790 - -
60. magi3 magi3 962 1.557 - - - - - - 0.741 - 0.816
61. rab25a ENSDARG00000058800 451 1.555 - - 0.748 - - 0.807 - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
62. npdc1 npdc1 221 1.553 - - - 0.758 - - - 0.795 -
63. nanp ENSDARG00000075143, ENSDARG00000114467 328 1.545 - - 0.760 - - 0.785 - - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
64. si:dkey-117m1.3 si:dkey-117m1.3 154 1.532 - - - 0.743 - - - 0.789 -
65. BX649494.1 BX649494.1 195 1.528 - - 0.736 - - 0.792 - - -
66. doc2d ENSDARG00000079962 76 1.525 - 0.704 - - - 0.821 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
67. ppp2r2ba 321 1.521 - - - - - 0.760 - 0.761 - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
68. si:ch211-264e16.1 ENSDARG00000068947 1358 1.519 - - 0.717 - - - - 0.802 - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
69. fam188a 275 1.518 - - - 0.762 - - - 0.756 - family with sequence similarity 188, member A
70. kctd1 ENSDARG00000074056 652 1.514 - - - 0.708 - 0.806 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
71. si:dkey-6f10.3 ENSDARG00000093660 116 1.512 - 0.769 - - - 0.743 - - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
72. HIP1R_1 HIP1R_1 129 1.508 - - - 0.757 - - 0.751 - -
73. map3k5 ENSDARG00000005416, ENSDARG00000114051 177 1.506 - 0.721 - - - 0.785 - - - mitogen-activated protein kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030827-3]
74. flrt3 ENSDARG00000076895 3516 1.5 - 0.762 - - - 0.738 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
75. PAXBP1 ENSDARG00000062361 626 1.497 - - - - - 0.737 - 0.760 - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
76. zgc:113294 ENSDARG00000032285 132 1.489 - - - 0.712 - 0.777 - - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
77. elk1 ENSDARG00000078066 414 1.488 - - - - - 0.783 0.705 - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
78. clpxa ENSDARG00000029063 1188 1.487 - - - 0.761 - - - 0.726 - caseinolytic mitochondrial matrix peptidase chaperone subunit a [Source:ZFIN;Acc:ZDB-GENE-040912-143]
79. rab14_1 ENSDARG00000074246 481 1.48 - - - 0.733 - 0.747 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
80. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.479 - - - 0.747 - 0.732 - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
81. chmp3 ENSDARG00000038064 577 1.462 - - - 0.737 - 0.725 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
82. wasf2 ENSDARG00000024209 5338 1.455 - - - - - 0.706 - - 0.749 WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
83. marveld3 ENSDARG00000099654 113 1.449 - - - 0.704 - 0.745 - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
84. malt1a malt1a 903 1.444 - - - - - - 0.735 0.709 -
85. syn2a ENSDARG00000045945 434 1.44 - - - 0.709 - 0.731 - - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
86. hs3st3l ENSDARG00000059903 184 1.44 - - - - - 0.713 - 0.727 - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
87. bfsp2 ENSDARG00000011998 295 0.991 0.991 - - - - - - - - beaded filament structural protein 2, phakinin [Source:ZFIN;Acc:ZDB-GENE-041212-58]
88. bbs5 ENSDARG00000039827 211 0.99 0.990 - - - - - - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
89. zyx ENSDARG00000075733 429 0.99 0.990 - - - - - - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
90. tmem194a tmem194a 745 0.989 0.989 - - - - - - - -
91. rnf168 ENSDARG00000112483 594 0.989 0.989 - - - - - - - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
92. pfkfb4l pfkfb4l 2539 0.989 0.989 - - - - - - - -
93. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.988 0.988 - - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
94. nr2f1b ENSDARG00000017168 1487 0.988 0.988 - - - - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
95. ghitm 1443 0.988 0.988 - - - - - - - - growth hormone inducible transmembrane protein
96. dhcr7 ENSDARG00000103226 673 0.988 0.988 - - - - - - - - 7-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-030912-9]
97. cgnl1 ENSDARG00000015805 856 0.988 0.988 - - - - - - - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
98. slc25a5 ENSDARG00000092553 626 0.988 0.988 - - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
99. daam2 ENSDARG00000028393 226 0.988 0.988 - - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
100. SUSD4 ENSDARG00000026335 195 0.988 0.988 - - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]

There are 1812 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA