Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for 5S_rRNA

Gene Name Gene ID Reads Annotation
5S_rRNA 5S_rRNA 239










Genes with expression patterns similar to 5S_rRNA

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA 5S_rRNA 239 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:ch73-367f21.6 ENSDARG00000089953 46 1.848 - 0.953 - - - 0.895 - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
3. si:ch211-241n15.2 si:ch211-241n15.2 435 1.787 - 0.903 - - - 0.884 - - -
4. ralaa ENSDARG00000045463 792 1.705 - 0.847 - - - - - 0.858 - v-ral simian leukemia viral oncogene homolog Aa (ras related) [Source:ZFIN;Acc:ZDB-GENE-040426-1344]
5. dgat1a ENSDARG00000103503 63 1.689 - - - - - 0.951 0.738 - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
6. ppp1r12c ENSDARG00000052423 183 1.685 - 0.925 - - - 0.760 - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
7. anapc1 ENSDARG00000075687 488 1.666 - 0.918 - - - 0.748 - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
8. OPLAH ENSDARG00000045123 707 1.665 - 0.811 - - - 0.854 - - - 5-oxoprolinase, ATP-hydrolysing [Source:ZFIN;Acc:ZDB-GENE-121214-293]
9. layna ENSDARG00000035169 515 1.632 - 0.906 - - - - 0.726 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
10. TUBB8P7_2 TUBB8P7_2 565 1.629 - 0.922 - - - - 0.707 - -
11. mon1a ENSDARG00000078585 554 1.621 - - - - - 0.792 - 0.829 - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
12. arhgef10 ENSDARG00000077788 28 1.614 - - - 0.735 - 0.879 - - - Rho guanine nucleotide exchange factor (GEF) 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6210]
13. caspa ENSDARG00000008165 286 1.586 - - 0.795 - - 0.791 - - - caspase a [Source:ZFIN;Acc:ZDB-GENE-000616-3]
14. CTIF ENSDARG00000090617 270 1.583 - - - - - 0.803 0.780 - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
15. ghrhra ENSDARG00000104961 230 1.573 - 0.818 - - - 0.755 - - - growth hormone releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-050315-2]
16. plekhf2 ENSDARG00000021141 529 1.57 - 0.764 - - - 0.806 - - - pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
17. ap5m1 ENSDARG00000031533 153 1.569 - 0.856 0.713 - - - - - - adaptor related protein complex 5 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-050522-231]
18. arl6ip5b ENSDARG00000016238 1622 1.566 - 0.802 - - - 0.764 - - - ADP-ribosylation factor-like 6 interacting protein 5b [Source:ZFIN;Acc:ZDB-GENE-040718-223]
19. arhgef25b ENSDARG00000014465 669 1.563 - 0.857 0.706 - - - - - - Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
20. olfml3b ENSDARG00000062171 264 1.56 0.813 - - - - 0.747 - - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
21. aars2 ENSDARG00000107385 190 1.552 0.837 - - - - - - 0.715 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
22. DOCK4 DOCK4 78 1.505 - - 0.786 - - - 0.719 - -
23. ncam1b ENSDARG00000007220 233 1.5 - - 0.743 - - - 0.757 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
24. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 1.486 - - 0.752 0.734 - - - - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
25. pnoca ENSDARG00000025024 467 1.479 - 0.776 - - - - 0.703 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
26. si:dkey-266m15.6 ENSDARG00000078508 490 1.47 - - - - - 0.767 - 0.703 - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
27. zgc:101640 733 1.426 - 0.724 - - - - - 0.702 - zgc:101640, transcript variant X2
28. slc35e4 ENSDARG00000009459, ENSDARG00000109666 114 0.979 - 0.979 - - - - - - - solute carrier family 35, member E4 [Source:ZFIN;Acc:ZDB-GENE-050417-407]
29. MEGF9 MEGF9 482 0.978 - 0.978 - - - - - - -
30. fam69b ENSDARG00000117093 244 0.972 - 0.972 - - - - - - - family with sequence similarity 69, member B [Source:ZFIN;Acc:ZDB-GENE-080721-1]
31. dnmt3 dnmt3 1912 0.972 - 0.972 - - - - - - -
32. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 0.963 - - - - - 0.963 - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
33. lsm14b ENSDARG00000025386 23 0.959 - - - - - 0.959 - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
34. B3GNT2 B3GNT2 348 0.959 - - - - - 0.959 - - -
35. gpr78 gpr78 135 0.958 - - - - - 0.958 - - -
36. PPP1R3E PPP1R3E 340 0.956 - 0.956 - - - - - - -
37. si:dkey-247i3.4 si:dkey-247i3.4 89 0.956 - 0.956 - - - - - - -
38. nsrp1 ENSDARG00000015221 1598 0.954 - 0.954 - - - - - - - nuclear speckle splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2646]
39. eif4ebp3 ENSDARG00000054916 583 0.954 - 0.954 - - - - - - - eukaryotic translation initiation factor 4E binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-44]
40. efnb2b ENSDARG00000074050 77 0.954 - - - - - 0.954 - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
41. fam214b ENSDARG00000068650 134 0.951 - 0.951 - - - - - - - family with sequence similarity 214, member B [Source:ZFIN;Acc:ZDB-GENE-060526-330]
42. CLCN4 ENSDARG00000035808 397 0.95 - 0.950 - - - - - - - chloride channel, voltage-sensitive 4 [Source:ZFIN;Acc:ZDB-GENE-061013-353]
43. CABIN1 ENSDARG00000079326 905 0.949 - 0.949 - - - - - - - calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
44. ACTN2 ACTN2 343 0.948 - 0.948 - - - - - - -
45. BX284638.2 BX284638.2 265 0.948 - 0.948 - - - - - - -
46. RHBDF1 RHBDF1 131 0.947 - 0.947 - - - - - - -
47. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 0.947 - 0.947 - - - - - - - cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
48. kctd16b ENSDARG00000020102 83 0.945 - - - - - - - 0.945 - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
49. CU459160.1 CU459160.1 104 0.944 - - - - - - - 0.944 -
50. g6pca.1 ENSDARG00000031616 401 0.944 - 0.944 - - - - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
51. ATP10B ENSDARG00000076230 989 0.943 - 0.943 - - - - - - - ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
52. CU638695.1 CU638695.1 90 0.943 - 0.943 - - - - - - -
53. SYT7 SYT7 45 0.943 - 0.943 - - - - - - -
54. agtrap ENSDARG00000077082, ENSDARG00000114680 329 0.943 - 0.943 - - - - - - - angiotensin II receptor-associated protein [Source:ZFIN;Acc:ZDB-GENE-050309-11]
55. arrdc1b ENSDARG00000079839 236 0.942 - 0.942 - - - - - - - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
56. zp2.1 ENSDARG00000086352 41 0.94 - 0.940 - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
57. nudcd1 ENSDARG00000036158 608 0.94 - 0.940 - - - - - - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
58. atad1a ENSDARG00000023267 155 0.939 - 0.939 - - - - - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
59. MPV17L MPV17L 39 0.939 - 0.939 - - - - - - -
60. si:dkey-253d23.4 ENSDARG00000079762 1560 0.939 - 0.939 - - - - - - - si:dkey-253d23.4 [Source:ZFIN;Acc:ZDB-GENE-050208-730]
61. ankrd33ba ENSDARG00000058357 214 0.938 - 0.938 - - - - - - - ankyrin repeat domain 33ba [Source:ZFIN;Acc:ZDB-GENE-040724-39]
62. MSR1 MSR1 449 0.938 - 0.938 - - - - - - -
63. crym ENSDARG00000062817 171 0.938 - 0.938 - - - - - - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
64. zgc:77056 ENSDARG00000029615 297 0.938 - 0.938 - - - - - - - zgc:77056 [Source:ZFIN;Acc:ZDB-GENE-030131-5248]
65. ppp2r2c ppp2r2c 441 0.936 - 0.936 - - - - - - -
66. actr2b ENSDARG00000070076 49 0.936 - - - - - 0.936 - - - ARP2 actin related protein 2b homolog [Source:ZFIN;Acc:ZDB-GENE-050410-4]
67. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 0.935 - 0.935 - - - - - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
68. slc52a3 ENSDARG00000042737 67 0.933 - 0.933 - - - - - - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
69. si:dkey-222h21.11 ENSDARG00000092984 13 0.933 - 0.933 - - - - - - - si:dkey-222h21.11 [Source:ZFIN;Acc:ZDB-GENE-081031-32]
70. si:dkey-7f3.14 ENSDARG00000095050 18 0.933 - 0.933 - - - - - - - si:dkey-7f3.14 [Source:ZFIN;Acc:ZDB-GENE-100922-186]
71. BX927369.7 BX927369.7 12 0.933 - 0.933 - - - - - - -
72. si:dkey-234l24.7 ENSDARG00000113738 8 0.933 - 0.933 - - - - - - - si:dkey-234l24.7 [Source:ZFIN;Acc:ZDB-GENE-050420-90]
73. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 0.933 - 0.933 - - - - - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
74. CU694368.1 CU694368.1 56 0.933 - 0.933 - - - - - - -
75. si:ch211-149a19.3 ENSDARG00000079456 115 0.933 - 0.933 - - - - - - - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
76. si:dkey-269o24.7 si:dkey-269o24.7 28 0.933 - 0.933 - - - - - - -
77. capn3b ENSDARG00000043035, ENSDARG00000113539 229 0.933 - 0.933 - - - - - - - calpain 3b [Source:ZFIN;Acc:ZDB-GENE-041001-149]
78. BX547934.1 ENSDARG00000097061 35 0.933 - 0.933 - - - - - - -
79. BX537137.1 ENSDARG00000092436 77 0.933 - - - - - 0.933 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
80. si:dkey-71l1.1 ENSDARG00000052411 11 0.933 - 0.933 - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
81. kcnj1b ENSDARG00000002666 87 0.933 - 0.933 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
82. SAMD9L SAMD9L 10 0.933 - 0.933 - - - - - - -
83. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 0.933 - 0.933 - - - - - - -
84. ddr2a ENSDARG00000100693 236 0.932 - - - - - 0.932 - - - discoidin domain receptor tyrosine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-090316-2]
85. grin2ab ENSDARG00000070543 31 0.932 - 0.932 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
86. akt2 ENSDARG00000011219 647 0.932 - 0.932 - - - - - - - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
87. SLC16A3 ENSDARG00000045051 83 0.932 - 0.932 - - - - - - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
88. si:dkeyp-1h4.8 208 0.932 - 0.932 - - - - - - - si:dkeyp-1h4.8
89. crebrf ENSDARG00000105114 21 0.932 - 0.932 - - - - - - - creb3 regulatory factor [Source:ZFIN;Acc:ZDB-GENE-120203-3]
90. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.932 - 0.932 - - - - - - - guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
91. prom1a ENSDARG00000039966 227 0.931 - 0.931 - - - - - - - prominin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1577]
92. C3H16orf58 C3H16orf58 487 0.931 - 0.931 - - - - - - -
93. roraa ENSDARG00000031768 278 0.93 - 0.930 - - - - - - - RAR-related orphan receptor A, paralog a [Source:ZFIN;Acc:ZDB-GENE-060306-2]
94. si:ch211-113a14.28 56 0.93 - 0.930 - - - - - - - si:ch211-113a14.28
95. pcdh1b ENSDARG00000036175 101 0.93 - - - - - 0.930 - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
96. map7d2b ENSDARG00000045316 702 0.93 - 0.930 - - - - - - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
97. CEP85 ENSDARG00000060215 537 0.93 - 0.930 - - - - - - - centrosomal protein 85 [Source:ZFIN;Acc:ZDB-GENE-030131-1998]
98. glt8d1 ENSDARG00000040157 120 0.929 - 0.929 - - - - - - - glycosyltransferase 8 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-23]
99. HNRNPUL2 HNRNPUL2 110 0.929 - 0.929 - - - - - - -
100. zic3 ENSDARG00000071497 1448 0.929 - 0.929 - - - - - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]

There are 1170 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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