Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Sox4

Gene Name Gene ID Reads Annotation
Sox4 ENSMUSG00000076431 8757 SRY (sex determining region Y)-box 4 [Source:MGI Symbol;Acc:MGI:98366]







Genes with expression patterns similar to Sox4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sox4 ENSMUSG00000076431 8757 6 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 4 [Source:MGI Symbol;Acc:MGI:98366]
2. Mta2 ENSMUSG00000071646 5360 0.891 - 0.891 - - - - metastasis-associated gene family, member 2 [Source:MGI Symbol;Acc:MGI:1346340]
3. Hat1 ENSMUSG00000027018 4642 0.886 - 0.886 - - - - histone aminotransferase 1 [Source:MGI Symbol;Acc:MGI:96013]
4. Tmem30a ENSMUSG00000032328 4977 0.865 - 0.865 - - - - transmembrane protein 30A [Source:MGI Symbol;Acc:MGI:106402]
5. Gle1 ENSMUSG00000019715 2053 0.858 - 0.858 - - - - GLE1 RNA export mediator (yeast) [Source:MGI Symbol;Acc:MGI:1921662]
6. Trpc4ap ENSMUSG00000038324 3417 0.853 - 0.853 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein [Source:MGI Symbol;Acc:MGI:1930751]
7. Smad4 ENSMUSG00000024515 3795 0.847 - 0.847 - - - - SMAD family member 4 [Source:MGI Symbol;Acc:MGI:894293]
8. Gm12751 ENSMUSG00000062554 1377 0.843 - 0.843 - - - - predicted gene 12751 [Source:MGI Symbol;Acc:MGI:3651049]
9. Seh1l ENSMUSG00000079614 7707 0.842 - 0.842 - - - - SEH1-like (S. cerevisiae [Source:MGI Symbol;Acc:MGI:1919374]
10. Gm3550 ENSMUSG00000078240 469 0.834 - 0.834 - - - - predicted gene 3550 [Source:MGI Symbol;Acc:MGI:3781727]
11. Git1 ENSMUSG00000011877 5458 0.833 - 0.833 - - - - G protein-coupled receptor kinase-interactor 1 [Source:MGI Symbol;Acc:MGI:1927140]
12. Ythdf1 ENSMUSG00000038848 7664 0.817 - 0.817 - - - - YTH domain family 1 [Source:MGI Symbol;Acc:MGI:1917431]
13. Uhmk1 ENSMUSG00000026667 3184 0.813 - 0.813 - - - - U2AF homology motif (UHM) kinase 1 [Source:MGI Symbol;Acc:MGI:1341908]
14. Syncrip ENSMUSG00000032423 12993 0.808 - 0.808 - - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690]
15. 4632427E13Rik ENSMUSG00000074024 3303 0.803 - 0.803 - - - - RIKEN cDNA 4632427E13 gene [Source:MGI Symbol;Acc:MGI:1915436]
16. Fip1l1 ENSMUSG00000029227 2891 0.801 0.801 - - - - - FIP1 like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914149]
17. Srsf2 ENSMUSG00000034120 1325 0.8 - 0.800 - - - - serine/arginine-rich splicing factor 2 [Source:MGI Symbol;Acc:MGI:98284]
18. Chmp5 ENSMUSG00000028419 5927 0.796 - 0.796 - - - - charged multivesicular body protein 5 [Source:MGI Symbol;Acc:MGI:1924209]
19. Tnpo2 ENSMUSG00000031691 3393 0.794 - 0.794 - - - - transportin 2 (importin 3, karyopherin beta 2b) [Source:MGI Symbol;Acc:MGI:2384849]
20. Nup50 ENSMUSG00000016619 5771 0.791 - 0.791 - - - - nucleoporin 50 [Source:MGI Symbol;Acc:MGI:1351502]
21. Gm15148 ENSMUSG00000082423 4827 0.787 - 0.787 - - - - predicted gene 15148 [Source:MGI Symbol;Acc:MGI:3705350]
22. Ddx11 ENSMUSG00000035842 838 0.779 - 0.779 - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:MGI Symbol;Acc:MGI:2443590]
23. Dlk1 ENSMUSG00000040856, ENSMUSG00000098411 15785 0.779 0.779 - - - - - delta like non-canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:94900]
24. Arfip2 ENSMUSG00000030881 1538 0.778 - 0.778 - - - - ADP-ribosylation factor interacting protein 2 [Source:MGI Symbol;Acc:MGI:1924182]
25. Ube2c ENSMUSG00000001403 11085 0.778 - 0.778 - - - - ubiquitin-conjugating enzyme E2C [Source:MGI Symbol;Acc:MGI:1915862]
26. Vezf1 ENSMUSG00000018377, ENSMUSG00000098546 6251 0.772 - 0.772 - - - - vascular endothelial zinc finger 1 [Source:MGI Symbol;Acc:MGI:1313291]
27. Nomo1 ENSMUSG00000030835 5074 0.77 - 0.770 - - - - nodal modulator 1 [Source:MGI Symbol;Acc:MGI:2385850]
28. Arhgap10 ENSMUSG00000037148 521 0.77 - 0.770 - - - - Rho GTPase activating protein 10 [Source:MGI Symbol;Acc:MGI:1925764]
29. Polr2f ENSMUSG00000033020 8300 0.767 - 0.767 - - - - polymerase (RNA) II (DNA directed) polypeptide F [Source:MGI Symbol;Acc:MGI:1349393]
30. Snx18 ENSMUSG00000042364 4053 0.767 - 0.767 - - - - sorting nexin 18 [Source:MGI Symbol;Acc:MGI:2137642]
31. Phb ENSMUSG00000038845 3385 0.766 - 0.766 - - - - prohibitin [Source:MGI Symbol;Acc:MGI:97572]
32. Gpr89 ENSMUSG00000028096 598 0.766 - 0.766 - - - - G protein-coupled receptor 89 [Source:MGI Symbol;Acc:MGI:1914799]
33. Gm10031 ENSMUSG00000101523 547 0.765 - 0.765 - - - - predicted pseudogene 10031 [Source:MGI Symbol;Acc:MGI:3704198]
34. Arhgef2 ENSMUSG00000028059 3179 0.763 - 0.763 - - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:103264]
35. Hs6st1 ENSMUSG00000045216 2389 0.761 - 0.761 - - - - heparan sulfate 6-O-sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1354958]
36. Slc38a4 ENSMUSG00000022464 2482 0.761 - 0.761 - - - - solute carrier family 38, member 4 [Source:MGI Symbol;Acc:MGI:1916604]
37. Gpn1 ENSMUSG00000064037 2632 0.761 - 0.761 - - - - GPN-loop GTPase 1 [Source:MGI Symbol;Acc:MGI:1921504]
38. Sep-02 Sep-02 14133 0.76 0.760 - - - - -
39. Utp20 ENSMUSG00000004356 1170 0.758 - 0.758 - - - - UTP20 small subunit processome component [Source:MGI Symbol;Acc:MGI:1917933]
40. Cad ENSMUSG00000013629 2151 0.755 - 0.755 - - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:MGI Symbol;Acc:MGI:1916969]
41. Rbm25 ENSMUSG00000010608 21393 0.755 - 0.755 - - - - RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289]
42. Qars ENSMUSG00000032604 3794 0.755 - 0.755 - - - - glutaminyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1915851]
43. Cers6 ENSMUSG00000027035 1300 0.754 - 0.754 - - - - ceramide synthase 6 [Source:MGI Symbol;Acc:MGI:2442564]
44. Nedd8 ENSMUSG00000010376 10119 0.754 - 0.754 - - - - neural precursor cell expressed, developmentally down-regulated gene 8 [Source:MGI Symbol;Acc:MGI:97301]
45. Mob2 ENSMUSG00000025147 932 0.753 - 0.753 - - - - MOB kinase activator 2 [Source:MGI Symbol;Acc:MGI:1919891]
46. Ppm1g ENSMUSG00000029147 5699 0.753 - 0.753 - - - - protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform [Source:MGI Symbol;Acc:MGI:106065]
47. Zcchc7 ENSMUSG00000035649 1297 0.753 - 0.753 - - - - zinc finger, CCHC domain containing 7 [Source:MGI Symbol;Acc:MGI:2442912]
48. Dnph1 ENSMUSG00000040658 1380 0.752 - 0.752 - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:MGI Symbol;Acc:MGI:3039376]
49. Zfp35 ENSMUSG00000063281 1438 0.752 - 0.752 - - - - zinc finger protein 35 [Source:MGI Symbol;Acc:MGI:99179]
50. Frs2 ENSMUSG00000020170 1424 0.752 - 0.752 - - - - fibroblast growth factor receptor substrate 2 [Source:MGI Symbol;Acc:MGI:1100860]
51. Snip1 ENSMUSG00000050213 980 0.752 - 0.752 - - - - Smad nuclear interacting protein 1 [Source:MGI Symbol;Acc:MGI:2156003]
52. Orc4 ENSMUSG00000026761 1899 0.752 - 0.752 - - - - origin recognition complex, subunit 4 [Source:MGI Symbol;Acc:MGI:1347043]
53. 2700050L05Rik 2700050L05Rik 694 0.752 - 0.752 - - - -
54. Mvk ENSMUSG00000041939 790 0.751 - 0.751 - - - - mevalonate kinase [Source:MGI Symbol;Acc:MGI:107624]
55. Gripap1 ENSMUSG00000031153 994 0.751 - 0.751 - - - - GRIP1 associated protein 1 [Source:MGI Symbol;Acc:MGI:1859616]
56. Pon2 ENSMUSG00000032667 1139 0.751 - 0.751 - - - - paraoxonase 2 [Source:MGI Symbol;Acc:MGI:106687]
57. Actg2 ENSMUSG00000059430 611 0.751 - 0.751 - - - - actin, gamma 2, smooth muscle, enteric [Source:MGI Symbol;Acc:MGI:104589]
58. Apbb1 ENSMUSG00000037032 1742 0.75 - 0.750 - - - - amyloid beta (A4) precursor protein-binding, family B, member 1 [Source:MGI Symbol;Acc:MGI:107765]
59. Rnf214 ENSMUSG00000042790 1144 0.75 - 0.750 - - - - ring finger protein 214 [Source:MGI Symbol;Acc:MGI:2444451]
60. Zfp652 ENSMUSG00000075595 1805 0.75 - 0.750 - - - - zinc finger protein 652 [Source:MGI Symbol;Acc:MGI:2442221]
61. Gm10819 ENSMUSG00000075268 296 0.75 - 0.750 - - - - predicted gene 10819 [Source:MGI Symbol;Acc:MGI:3642135]
62. Mapk3 ENSMUSG00000063065 1979 0.749 - 0.749 - - - - mitogen-activated protein kinase 3 [Source:MGI Symbol;Acc:MGI:1346859]
63. Vasp ENSMUSG00000030403 3283 0.749 - 0.749 - - - - vasodilator-stimulated phosphoprotein [Source:MGI Symbol;Acc:MGI:109268]
64. Cep63 ENSMUSG00000032534 639 0.749 - 0.749 - - - - centrosomal protein 63 [Source:MGI Symbol;Acc:MGI:2158560]
65. Lamtor4 ENSMUSG00000050552 1199 0.748 - 0.748 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:MGI Symbol;Acc:MGI:1913346]
66. Mov10 ENSMUSG00000002227 1195 0.747 - 0.747 - - - - Moloney leukemia virus 10 [Source:MGI Symbol;Acc:MGI:97054]
67. Actn4 ENSMUSG00000054808 4424 0.747 - 0.747 - - - - actinin alpha 4 [Source:MGI Symbol;Acc:MGI:1890773]
68. 4930452B06Rik ENSMUSG00000021747 971 0.747 - 0.747 - - - - RIKEN cDNA 4930452B06 gene [Source:MGI Symbol;Acc:MGI:1926154]
69. Larp4b ENSMUSG00000033499 1274 0.747 - 0.747 - - - - La ribonucleoprotein domain family, member 4B [Source:MGI Symbol;Acc:MGI:106330]
70. Hcls1 ENSMUSG00000022831 213 0.747 - 0.747 - - - - hematopoietic cell specific Lyn substrate 1 [Source:MGI Symbol;Acc:MGI:104568]
71. Rnf185 ENSMUSG00000020448 2485 0.746 - 0.746 - - - - ring finger protein 185 [Source:MGI Symbol;Acc:MGI:1922078]
72. Murc 198 0.746 - 0.746 - - - - muscle-related coiled-coil protein
73. Fam198b ENSMUSG00000027955 2290 0.746 - 0.746 - - - - family with sequence similarity 198, member B [Source:MGI Symbol;Acc:MGI:1915909]
74. Idnk ENSMUSG00000050002 1717 0.746 - 0.746 - - - - idnK gluconokinase homolog (E. coli) [Source:MGI Symbol;Acc:MGI:1922981]
75. Acbd5 ENSMUSG00000026781 774 0.746 - 0.746 - - - - acyl-Coenzyme A binding domain containing 5 [Source:MGI Symbol;Acc:MGI:1921409]
76. Hapln3 ENSMUSG00000030606 185 0.746 - 0.746 - - - - hyaluronan and proteoglycan link protein 3 [Source:MGI Symbol;Acc:MGI:1914916]
77. Rnf8 ENSMUSG00000090083 2854 0.746 - 0.746 - - - - ring finger protein 8 [Source:MGI Symbol;Acc:MGI:1929069]
78. Spire2 ENSMUSG00000010154 178 0.746 - 0.746 - - - - spire type actin nucleation factor 2 [Source:MGI Symbol;Acc:MGI:2446256]
79. Rtn4r ENSMUSG00000043811, ENSMUSG00000111113 196 0.746 - 0.746 - - - - reticulon 4 receptor [Source:MGI Symbol;Acc:MGI:2136886]
80. Adamts9 ENSMUSG00000030022 3704 0.745 - 0.745 - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9 [Source:MGI Symbol;Acc:MGI:1916320]
81. Tbc1d22b ENSMUSG00000042203 649 0.745 - 0.745 - - - - TBC1 domain family, member 22B [Source:MGI Symbol;Acc:MGI:2681867]
82. Tsga10 ENSMUSG00000060771 891 0.745 - 0.745 - - - - testis specific 10 [Source:MGI Symbol;Acc:MGI:2685063]
83. Noc2l ENSMUSG00000095567 594 0.745 - 0.745 - - - - NOC2 like nucleolar associated transcriptional repressor [Source:MGI Symbol;Acc:MGI:1931051]
84. Gm14165 ENSMUSG00000081434 180 0.745 - 0.745 - - - - predicted gene 14165 [Source:MGI Symbol;Acc:MGI:3650537]
85. Acn9 Acn9 933 0.745 - 0.745 - - - -
86. Gins1 ENSMUSG00000027454 1119 0.745 - 0.745 - - - - GINS complex subunit 1 (Psf1 homolog) [Source:MGI Symbol;Acc:MGI:1916520]
87. 0610009O20Rik 485 0.744 - 0.744 - - - - RIKEN cDNA 0610009O20 gene
88. AI429214 ENSMUSG00000074384 276 0.744 - 0.744 - - - - expressed sequence AI429214 [Source:MGI Symbol;Acc:MGI:2142538]
89. Paip1 ENSMUSG00000025451 3731 0.744 - 0.744 - - - - polyadenylate binding protein-interacting protein 1 [Source:MGI Symbol;Acc:MGI:2384993]
90. Snx19 ENSMUSG00000031993 550 0.744 - 0.744 - - - - sorting nexin 19 [Source:MGI Symbol;Acc:MGI:1921581]
91. Upp1 ENSMUSG00000020407 279 0.743 - 0.743 - - - - uridine phosphorylase 1 [Source:MGI Symbol;Acc:MGI:1097668]
92. Immp2l ENSMUSG00000056899 263 0.743 - 0.743 - - - - IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2135611]
93. Ufc1 ENSMUSG00000062963 2274 0.743 - 0.743 - - - - ubiquitin-fold modifier conjugating enzyme 1 [Source:MGI Symbol;Acc:MGI:1913405]
94. Rps2-ps13 ENSMUSG00000081684 3086 0.743 - 0.743 - - - - ribosomal protein S2, pseudogene 13 [Source:MGI Symbol;Acc:MGI:3705640]
95. RP23-103I12.13 RP23-103I12.13 1512 0.743 - 0.743 - - - -
96. Afg3l2 ENSMUSG00000024527 3339 0.743 - 0.743 - - - - AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
97. Etl4 ENSMUSG00000036617 2482 0.743 - 0.743 - - - - enhancer trap locus 4 [Source:MGI Symbol;Acc:MGI:95454]
98. Sumo2 ENSMUSG00000020738 1345 0.742 - 0.742 - - - - small ubiquitin-like modifier 2 [Source:MGI Symbol;Acc:MGI:2158813]
99. Zfp961 ENSMUSG00000052446 869 0.742 - 0.742 - - - - zinc finger protein 961 [Source:MGI Symbol;Acc:MGI:3583954]
100. Fam102a ENSMUSG00000039157 428 0.741 - 0.741 - - - - family with sequence similarity 102, member A [Source:MGI Symbol;Acc:MGI:2138935]

There are 68 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA