Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scrt1

Gene Name Gene ID Reads Annotation
Scrt1 ENSMUSG00000048385 155 scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]







Genes with expression patterns similar to Scrt1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scrt1 ENSMUSG00000048385 155 6 1.000 1.000 1.000 1.000 1.000 1.000 scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
2. Myt1 ENSMUSG00000010505 661 2.335 - - 0.736 - 0.756 0.843 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
3. Nhlh2 ENSMUSG00000048540 1310 2.282 - 0.739 - - 0.784 0.759 nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
4. Fez1 ENSMUSG00000032118 2537 2.277 - - 0.802 - 0.738 0.737 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
5. Srgap3 ENSMUSG00000030257 2941 2.265 - - 0.762 0.716 - 0.787 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
6. Scg3 ENSMUSG00000032181 445 1.618 - - 0.846 - 0.772 - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
7. Elavl3 ENSMUSG00000003410 2830 1.587 - - 0.885 - 0.702 - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
8. Ncan ENSMUSG00000002341 521 1.573 - - 0.816 - 0.757 - neurocan [Source:MGI Symbol;Acc:MGI:104694]
9. Rhbdl3 ENSMUSG00000017692 783 1.561 - - 0.797 - - 0.764 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
10. Hes6 ENSMUSG00000067071 1692 1.561 - - 0.790 0.771 - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
11. St18 ENSMUSG00000033740 408 1.537 - - 0.754 - 0.783 - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
12. Soga3 ENSMUSG00000038916 3972 1.534 - - 0.798 - 0.736 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
13. Nhlh1 ENSMUSG00000051251 2017 1.533 - - 0.784 - 0.749 - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
14. Syn1 ENSMUSG00000037217 289 1.514 - - 0.771 - - 0.743 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
15. Tubb2b ENSMUSG00000045136 41060 1.503 - - 0.748 - - 0.755 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
16. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 1.5 - 0.786 - - - 0.714 cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
17. Spock2 ENSMUSG00000058297 1096 1.487 - - 0.736 - 0.751 - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
18. Rtn1 ENSMUSG00000021087 2547 1.479 - - - - 0.705 0.774 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
19. Tubb3 ENSMUSG00000062380 9211 1.466 - - - - 0.751 0.715 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
20. Apc2 ENSMUSG00000020135 328 1.465 - 0.729 - - - 0.736 adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
21. Nrarp ENSMUSG00000078202 1708 1.464 - - 0.713 - 0.751 - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
22. C130071C03Rik ENSMUSG00000050334 1582 1.455 - - - 0.714 - 0.741 RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
23. Hecw1 ENSMUSG00000021301 236 1.45 - 0.725 0.725 - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2444115]
24. Rundc3a ENSMUSG00000006575 421 1.448 - 0.737 0.711 - - - RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
25. Sox3 ENSMUSG00000045179 1137 1.445 - - 0.713 - - 0.732 SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
26. Gm3764 ENSMUSG00000097156 474 1.442 - - 0.712 - 0.730 - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
27. Kif5a ENSMUSG00000074657 425 1.438 - 0.712 0.726 - - - kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
28. Ina ENSMUSG00000034336 3835 1.434 - 0.723 0.711 - - - internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
29. Apba2 ENSMUSG00000030519 840 1.43 - - - 0.703 0.727 - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
30. Basp1 ENSMUSG00000045763 22946 1.417 - - 0.709 - - 0.708 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
31. Gpr98 Gpr98 1797 1.416 - - 0.707 - - 0.709
32. Fam19a5 ENSMUSG00000054863 859 1.415 - 0.712 - - - 0.703 family with sequence similarity 19, member A5 [Source:MGI Symbol;Acc:MGI:2146182]
33. Ckb ENSMUSG00000001270 8443 1.409 - - 0.707 0.702 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
34. Nacad ENSMUSG00000041073 114 0.856 - - 0.856 - - - NAC alpha domain containing [Source:MGI Symbol;Acc:MGI:3603030]
35. Gdap1 ENSMUSG00000025777 166 0.854 - - 0.854 - - - ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
36. Foxd3 ENSMUSG00000067261, ENSMUSG00000116152 168 0.84 - - 0.840 - - - forkhead box D3 [Source:MGI Symbol;Acc:MGI:1347473]
37. Phactr3 ENSMUSG00000027525 233 0.836 - - 0.836 - - - phosphatase and actin regulator 3 [Source:MGI Symbol;Acc:MGI:1921439]
38. Gm13147 ENSMUSG00000087207 0 0.835 0.835 - - - - - predicted gene 13147 [Source:MGI Symbol;Acc:MGI:3651740]
39. Tbx15 ENSMUSG00000027868 23 0.835 0.835 - - - - - T-box 15 [Source:MGI Symbol;Acc:MGI:1277234]
40. Gm5883 ENSMUSG00000083713 2 0.835 0.835 - - - - - predicted gene 5883 [Source:MGI Symbol;Acc:MGI:3644644]
41. 4930548H24Rik ENSMUSG00000029138 3 0.835 0.835 - - - - - RIKEN cDNA 4930548H24 gene [Source:MGI Symbol;Acc:MGI:1914906]
42. Actrt3 ENSMUSG00000037737 5 0.835 0.835 - - - - - actin related protein T3 [Source:MGI Symbol;Acc:MGI:1923902]
43. Mmel1 ENSMUSG00000058183 3 0.835 0.835 - - - - - membrane metallo-endopeptidase-like 1 [Source:MGI Symbol;Acc:MGI:1351603]
44. Gm17233 ENSMUSG00000090706 0 0.835 0.835 - - - - - predicted gene 17233 [Source:MGI Symbol;Acc:MGI:4938060]
45. 8430423G03Rik ENSMUSG00000079069 2 0.835 0.835 - - - - - RIKEN cDNA 8430423G03 gene [Source:MGI Symbol;Acc:MGI:1918723]
46. Gm14157 Gm14157 3 0.835 0.835 - - - - -
47. RP23-81K14.3 RP23-81K14.3 1 0.835 0.835 - - - - -
48. Gm12243 ENSMUSG00000086028 0 0.835 0.835 - - - - - predicted gene 12243 [Source:MGI Symbol;Acc:MGI:3649716]
49. Gm12816 ENSMUSG00000083011 3 0.835 0.835 - - - - - predicted gene 12816 [Source:MGI Symbol;Acc:MGI:3649628]
50. Gm10615 Gm10615 8 0.835 0.835 - - - - -
51. Spata32 ENSMUSG00000044787 0 0.835 0.835 - - - - - spermatogenesis associated 32 [Source:MGI Symbol;Acc:MGI:3045340]
52. Gm11809 ENSMUSG00000082122 13 0.835 0.835 - - - - - predicted gene 11809 [Source:MGI Symbol;Acc:MGI:3650709]
53. Il1rn ENSMUSG00000026981 6 0.835 0.835 - - - - - interleukin 1 receptor antagonist [Source:MGI Symbol;Acc:MGI:96547]
54. Plxnb3 ENSMUSG00000031385 3 0.835 0.835 - - - - - plexin B3 [Source:MGI Symbol;Acc:MGI:2154240]
55. Gm14575 ENSMUSG00000083665 0 0.835 0.835 - - - - - predicted gene 14575 [Source:MGI Symbol;Acc:MGI:3705670]
56. Gm5265 ENSMUSG00000058622 6 0.835 0.835 - - - - - predicted pseudogene 5265 [Source:MGI Symbol;Acc:MGI:3643416]
57. Gad1 ENSMUSG00000070880 26 0.835 0.835 - - - - - glutamate decarboxylase 1 [Source:MGI Symbol;Acc:MGI:95632]
58. Ackr4 ENSMUSG00000079355 5 0.835 0.835 - - - - - atypical chemokine receptor 4 [Source:MGI Symbol;Acc:MGI:2181676]
59. Hrh3 ENSMUSG00000039059 5 0.835 0.835 - - - - - histamine receptor H3 [Source:MGI Symbol;Acc:MGI:2139279]
60. HOTAIRM1 HOTAIRM1 1 0.835 0.835 - - - - -
61. Btn1a1 ENSMUSG00000000706 24 0.835 0.835 - - - - - butyrophilin, subfamily 1, member A1 [Source:MGI Symbol;Acc:MGI:103118]
62. Tnfsf18 ENSMUSG00000066755 0 0.835 0.835 - - - - - tumor necrosis factor (ligand) superfamily, member 18 [Source:MGI Symbol;Acc:MGI:2673064]
63. Gm23856 ENSMUSG00000089005 0 0.835 0.835 - - - - - predicted gene, 23856 [Source:MGI Symbol;Acc:MGI:5453633]
64. Ankrd61 ENSMUSG00000029607 8 0.835 0.835 - - - - - ankyrin repeat domain 61 [Source:MGI Symbol;Acc:MGI:1913979]
65. Sycp1 ENSMUSG00000027855 14 0.835 0.835 - - - - - synaptonemal complex protein 1 [Source:MGI Symbol;Acc:MGI:105931]
66. Gm23287 ENSMUSG00000096280 0 0.835 0.835 - - - - - predicted gene, 23287 [Source:MGI Symbol;Acc:MGI:5453064]
67. Gm9767 ENSMUSG00000039098 19 0.835 0.835 - - - - - predicted gene 9767 [Source:MGI Symbol;Acc:MGI:3704352]
68. A230065N10Rik ENSMUSG00000092071 1 0.835 0.835 - - - - - RIKEN cDNA A230065N10 gene [Source:MGI Symbol;Acc:MGI:3642744]
69. Gm11978 ENSMUSG00000086373 1 0.835 0.835 - - - - - predicted gene 11978 [Source:MGI Symbol;Acc:MGI:3650695]
70. Htr1a ENSMUSG00000021721 2 0.835 0.835 - - - - - 5-hydroxytryptamine (serotonin) receptor 1A [Source:MGI Symbol;Acc:MGI:96273]
71. Gm14148 ENSMUSG00000083391 1 0.835 0.835 - - - - - predicted gene 14148 [Source:MGI Symbol;Acc:MGI:3651554]
72. Rasd2 ENSMUSG00000034472 16 0.835 0.835 - - - - - RASD family, member 2 [Source:MGI Symbol;Acc:MGI:1922391]
73. 4933406G16Rik ENSMUSG00000086025 2 0.835 0.835 - - - - - RIKEN cDNA 4933406G16 gene [Source:MGI Symbol;Acc:MGI:1921309]
74. Creg2 ENSMUSG00000050967 5 0.835 0.835 - - - - - cellular repressor of E1A-stimulated genes 2 [Source:MGI Symbol;Acc:MGI:1928333]
75. Gm14530 ENSMUSG00000081735 6 0.835 0.835 - - - - - predicted gene 14530 [Source:MGI Symbol;Acc:MGI:3705621]
76. Gm16245 Gm16245 2 0.835 0.835 - - - - -
77. A4galt ENSMUSG00000047878 4 0.835 0.835 - - - - - alpha 1,4-galactosyltransferase [Source:MGI Symbol;Acc:MGI:3512453]
78. Rlbp1 ENSMUSG00000039194 10 0.835 0.835 - - - - - retinaldehyde binding protein 1 [Source:MGI Symbol;Acc:MGI:97930]
79. Mos ENSMUSG00000078365 9 0.835 0.835 - - - - - Moloney sarcoma oncogene [Source:MGI Symbol;Acc:MGI:97052]
80. Gm17056 ENSMUSG00000090387 2 0.835 0.835 - - - - - predicted gene 17056 [Source:MGI Symbol;Acc:MGI:4937883]
81. Gm22572 ENSMUSG00000064919 0 0.835 0.835 - - - - - predicted gene, 22572 [Source:MGI Symbol;Acc:MGI:5452349]
82. Gm23318 ENSMUSG00000088625 0 0.835 0.835 - - - - - predicted gene, 23318 [Source:MGI Symbol;Acc:MGI:5453095]
83. Gm5944 ENSMUSG00000081034 0 0.835 0.835 - - - - - predicted gene 5944 [Source:MGI Symbol;Acc:MGI:3646005]
84. Gm5210 ENSMUSG00000098190 0 0.835 0.835 - - - - - predicted gene 5210 [Source:MGI Symbol;Acc:MGI:3644379]
85. Gm17495 Gm17495 0 0.835 0.835 - - - - -
86. Kcna3 ENSMUSG00000047959 0 0.835 0.835 - - - - - potassium voltage-gated channel, shaker-related subfamily, member 3 [Source:MGI Symbol;Acc:MGI:96660]
87. AY702103 ENSMUSG00000067103 4 0.835 0.835 - - - - - cDNA sequence AY702103 [Source:MGI Symbol;Acc:MGI:3525105]
88. Trpm2 ENSMUSG00000009292 9 0.835 0.835 - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:MGI Symbol;Acc:MGI:1351901]
89. Gm14207 ENSMUSG00000074912 16 0.835 0.835 - - - - - predicted gene 14207 [Source:MGI Symbol;Acc:MGI:3649550]
90. Gm15941 ENSMUSG00000086992 0 0.835 0.835 - - - - - predicted gene 15941 [Source:MGI Symbol;Acc:MGI:3802081]
91. Syt6 ENSMUSG00000027849 95 0.835 0.835 - - - - - synaptotagmin VI [Source:MGI Symbol;Acc:MGI:1859544]
92. Nol4 ENSMUSG00000041923 24 0.835 0.835 - - - - - nucleolar protein 4 [Source:MGI Symbol;Acc:MGI:2441684]
93. Gm20661 ENSMUSG00000079323 3 0.835 0.835 - - - - - predicted gene 20661 [Source:MGI Symbol;Acc:MGI:5313108]
94. 4930564B18Rik 4930564B18Rik 0 0.835 0.835 - - - - -
95. Gm20649 ENSMUSG00000093662 1 0.835 0.835 - - - - - predicted gene 20649 [Source:MGI Symbol;Acc:MGI:5313096]
96. Hist2h2ab ENSMUSG00000063689 12 0.835 0.835 - - - - - histone cluster 2, H2ab [Source:MGI Symbol;Acc:MGI:2448314]
97. Gm20545 ENSMUSG00000092428 0 0.835 0.835 - - - - - predicted gene 20545 [Source:MGI Symbol;Acc:MGI:5142010]
98. Gm11274 ENSMUSG00000085331 2 0.835 0.835 - - - - - predicted gene 11274 [Source:MGI Symbol;Acc:MGI:3649225]
99. Ripply1 ENSMUSG00000072945 0 0.835 0.835 - - - - - ripply transcriptional repressor 1 [Source:MGI Symbol;Acc:MGI:3614797]
100. Gm2076 ENSMUSG00000098092 2 0.835 0.835 - - - - - predicted gene 2076 [Source:MGI Symbol;Acc:MGI:3780243]

There are 141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA