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Results for Rtn4

Gene Name Gene ID Reads Annotation
Rtn4 ENSMUSG00000020458 14007 reticulon 4 [Source:MGI Symbol;Acc:MGI:1915835]







Genes with expression patterns similar to Rtn4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rtn4 ENSMUSG00000020458 14007 5 1.000 1.000 - 1.000 1.000 1.000 reticulon 4 [Source:MGI Symbol;Acc:MGI:1915835]
2. Apoa1bp 5197 0.803 0.803 - - - - - apolipoprotein A-I binding protein, transcript variant X1
3. Eif4g3 ENSMUSG00000028760 6031 0.803 0.803 - - - - - eukaryotic translation initiation factor 4 gamma, 3 [Source:MGI Symbol;Acc:MGI:1923935]
4. Arl5b ENSMUSG00000017418 3853 0.791 0.791 - - - - - ADP-ribosylation factor-like 5B [Source:MGI Symbol;Acc:MGI:1923119]
5. Nup93 ENSMUSG00000032939 4440 0.788 0.788 - - - - - nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055]
6. Wdr26 ENSMUSG00000038733 10280 0.783 0.783 - - - - - WD repeat domain 26 [Source:MGI Symbol;Acc:MGI:1923825]
7. Pum1 ENSMUSG00000028580, ENSMUSG00000106966 17559 0.773 - 0.773 - - - - pumilio RNA-binding family member 1 [Source:MGI Symbol;Acc:MGI:1931749]
8. Tceb2 11207 0.771 0.771 - - - - - transcription elongation factor B (SIII), polypeptide 2
9. Dnmt3b ENSMUSG00000027478 1548 0.768 0.768 - - - - - DNA methyltransferase 3B [Source:MGI Symbol;Acc:MGI:1261819]
10. Pfdn1 ENSMUSG00000024346 2808 0.767 0.767 - - - - - prefoldin 1 [Source:MGI Symbol;Acc:MGI:1914449]
11. Elovl6 ENSMUSG00000041220 3320 0.767 0.767 - - - - - ELOVL family member 6, elongation of long chain fatty acids (yeast) [Source:MGI Symbol;Acc:MGI:2156528]
12. Dynll2 ENSMUSG00000020483 7870 0.767 0.767 - - - - - dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347]
13. Lasp1 ENSMUSG00000038366 6206 0.762 0.762 - - - - - LIM and SH3 protein 1 [Source:MGI Symbol;Acc:MGI:109656]
14. Pard3 ENSMUSG00000025812 8860 0.759 - 0.759 - - - - par-3 family cell polarity regulator [Source:MGI Symbol;Acc:MGI:2135608]
15. Sirt2 ENSMUSG00000015149 1091 0.759 0.759 - - - - - sirtuin 2 [Source:MGI Symbol;Acc:MGI:1927664]
16. Cttnbp2nl ENSMUSG00000062127 1808 0.758 0.758 - - - - - CTTNBP2 N-terminal like [Source:MGI Symbol;Acc:MGI:1933137]
17. Mapk6 ENSMUSG00000042688 2719 0.754 0.754 - - - - - mitogen-activated protein kinase 6 [Source:MGI Symbol;Acc:MGI:1354946]
18. E430025E21Rik 3136 0.751 0.751 - - - - - RIKEN cDNA E430025E21 gene, transcript variant X1
19. Rdh13 ENSMUSG00000008435 762 0.75 0.750 - - - - - retinol dehydrogenase 13 (all-trans and 9-cis) [Source:MGI Symbol;Acc:MGI:1918732]
20. Ndufb4 ENSMUSG00000022820 1605 0.75 0.750 - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:MGI Symbol;Acc:MGI:1915444]
21. Mtap ENSMUSG00000062937 6057 0.75 - 0.750 - - - - methylthioadenosine phosphorylase [Source:MGI Symbol;Acc:MGI:1914152]
22. Rabl6 ENSMUSG00000015087 1555 0.749 0.749 - - - - - RAB, member RAS oncogene family-like 6 [Source:MGI Symbol;Acc:MGI:2442633]
23. Tmem11 ENSMUSG00000043284 789 0.749 0.749 - - - - - transmembrane protein 11 [Source:MGI Symbol;Acc:MGI:2144726]
24. Srp19 ENSMUSG00000014504 2639 0.749 0.749 - - - - - signal recognition particle 19 [Source:MGI Symbol;Acc:MGI:1913634]
25. Ppp3cb ENSMUSG00000021816 6623 0.748 0.748 - - - - - protein phosphatase 3, catalytic subunit, beta isoform [Source:MGI Symbol;Acc:MGI:107163]
26. Mrpl54 ENSMUSG00000034932 3136 0.748 0.748 - - - - - mitochondrial ribosomal protein L54 [Source:MGI Symbol;Acc:MGI:1913297]
27. Acly ENSMUSG00000020917 6035 0.747 - 0.747 - - - - ATP citrate lyase [Source:MGI Symbol;Acc:MGI:103251]
28. Use1 ENSMUSG00000002395 1606 0.747 0.747 - - - - - unconventional SNARE in the ER 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914273]
29. Sf3b1 ENSMUSG00000025982 19634 0.744 0.744 - - - - - splicing factor 3b, subunit 1 [Source:MGI Symbol;Acc:MGI:1932339]
30. Gstp1 ENSMUSG00000060803, ENSMUSG00000097830 2994 0.743 0.743 - - - - - glutathione S-transferase, pi 1 [Source:MGI Symbol;Acc:MGI:95865]
31. Fubp3 ENSMUSG00000026843 2442 0.743 0.743 - - - - - far upstream element (FUSE) binding protein 3 [Source:MGI Symbol;Acc:MGI:2443699]
32. Eif5 ENSMUSG00000021282 16718 0.743 0.743 - - - - - eukaryotic translation initiation factor 5 [Source:MGI Symbol;Acc:MGI:95309]
33. Ephb2 ENSMUSG00000028664 1793 0.743 0.743 - - - - - Eph receptor B2 [Source:MGI Symbol;Acc:MGI:99611]
34. Fam98b ENSMUSG00000027349 5757 0.742 - 0.742 - - - - family with sequence similarity 98, member B [Source:MGI Symbol;Acc:MGI:1915465]
35. Hspa13 ENSMUSG00000032932 2004 0.741 0.741 - - - - - heat shock protein 70 family, member 13 [Source:MGI Symbol;Acc:MGI:1309463]
36. Narg2 Narg2 1692 0.741 0.741 - - - - -
37. Chd3 ENSMUSG00000018474 12258 0.74 0.740 - - - - - chromodomain helicase DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1344395]
38. Tgif1 ENSMUSG00000047407 2966 0.738 0.738 - - - - - TGFB-induced factor homeobox 1 [Source:MGI Symbol;Acc:MGI:1194497]
39. Mpzl1 ENSMUSG00000026566 11257 0.737 0.737 - - - - - myelin protein zero-like 1 [Source:MGI Symbol;Acc:MGI:1915731]
40. Ppt1 ENSMUSG00000028657 1603 0.736 0.736 - - - - - palmitoyl-protein thioesterase 1 [Source:MGI Symbol;Acc:MGI:1298204]
41. Cmas ENSMUSG00000030282 6729 0.736 - 0.736 - - - - cytidine monophospho-N-acetylneuraminic acid synthetase [Source:MGI Symbol;Acc:MGI:1337124]
42. Timm22 ENSMUSG00000020843 2343 0.736 0.736 - - - - - translocase of inner mitochondrial membrane 22 [Source:MGI Symbol;Acc:MGI:1929742]
43. Hist1h2ae ENSMUSG00000069272 524 0.735 0.735 - - - - - histone cluster 1, H2ae [Source:MGI Symbol;Acc:MGI:2448290]
44. Snx12 ENSMUSG00000046032 4519 0.734 - 0.734 - - - - sorting nexin 12 [Source:MGI Symbol;Acc:MGI:1919331]
45. Fnbp4 ENSMUSG00000008200 11005 0.733 - 0.733 - - - - formin binding protein 4 [Source:MGI Symbol;Acc:MGI:1860513]
46. Trip11 ENSMUSG00000021188 2368 0.732 0.732 - - - - - thyroid hormone receptor interactor 11 [Source:MGI Symbol;Acc:MGI:1924393]
47. Cops7b ENSMUSG00000026240 2018 0.732 0.732 - - - - - COP9 signalosome subunit 7B [Source:MGI Symbol;Acc:MGI:1349388]
48. Itgb3bp ENSMUSG00000028549, ENSMUSG00000115904 1309 0.732 0.732 - - - - - integrin beta 3 binding protein (beta3-endonexin) [Source:MGI Symbol;Acc:MGI:1914983]
49. Ckap5 ENSMUSG00000040549 3769 0.732 0.732 - - - - - cytoskeleton associated protein 5 [Source:MGI Symbol;Acc:MGI:1923036]
50. Zfp706 ENSMUSG00000062397 10503 0.731 0.731 - - - - - zinc finger protein 706 [Source:MGI Symbol;Acc:MGI:1915286]
51. Prdx1 ENSMUSG00000028691 28315 0.731 - 0.731 - - - - peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
52. Cul1 ENSMUSG00000029686 8892 0.73 0.730 - - - - - cullin 1 [Source:MGI Symbol;Acc:MGI:1349658]
53. Scmh1 ENSMUSG00000000085 901 0.73 0.730 - - - - - sex comb on midleg homolog 1 [Source:MGI Symbol;Acc:MGI:1352762]
54. Krr1 ENSMUSG00000063334 2712 0.729 0.729 - - - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:MGI Symbol;Acc:MGI:1289274]
55. Calu ENSMUSG00000029767 4381 0.729 0.729 - - - - - calumenin [Source:MGI Symbol;Acc:MGI:1097158]
56. Mpdz ENSMUSG00000028402 2051 0.729 0.729 - - - - - multiple PDZ domain protein [Source:MGI Symbol;Acc:MGI:1343489]
57. Clptm1 ENSMUSG00000002981 3342 0.728 0.728 - - - - - cleft lip and palate associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1927155]
58. Pan3 ENSMUSG00000029647 1662 0.727 0.727 - - - - - PAN3 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1919837]
59. Dpm1 ENSMUSG00000078919 690 0.725 0.725 - - - - - dolichol-phosphate (beta-D) mannosyltransferase 1 [Source:MGI Symbol;Acc:MGI:1330239]
60. Tpt1-ps3 ENSMUSG00000084319 9840 0.725 0.725 - - - - - tumor protein, translationally-controlled, pseudogene 3 [Source:MGI Symbol;Acc:MGI:2664997]
61. Llph ENSMUSG00000020224 3242 0.724 0.724 - - - - - LLP homolog, long-term synaptic facilitation (Aplysia) [Source:MGI Symbol;Acc:MGI:1913475]
62. Mcm3 ENSMUSG00000041859 5102 0.724 - 0.724 - - - - minichromosome maintenance complex component 3 [Source:MGI Symbol;Acc:MGI:101845]
63. Camk2d ENSMUSG00000053819 1131 0.723 0.723 - - - - - calcium/calmodulin-dependent protein kinase II, delta [Source:MGI Symbol;Acc:MGI:1341265]
64. Hectd1 ENSMUSG00000035247 3097 0.723 0.723 - - - - - HECT domain E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2384768]
65. Rsbn1l ENSMUSG00000039968 1779 0.722 0.722 - - - - - round spermatid basic protein 1-like [Source:MGI Symbol;Acc:MGI:3036237]
66. Ilf3 ENSMUSG00000032178 14952 0.722 0.722 - - - - - interleukin enhancer binding factor 3 [Source:MGI Symbol;Acc:MGI:1339973]
67. Cdca4 ENSMUSG00000047832 12688 0.722 - 0.722 - - - - cell division cycle associated 4 [Source:MGI Symbol;Acc:MGI:1919213]
68. Map3k11 ENSMUSG00000004054 519 0.721 0.721 - - - - - mitogen-activated protein kinase kinase kinase 11 [Source:MGI Symbol;Acc:MGI:1346880]
69. Cetn3 ENSMUSG00000021537 4363 0.721 0.721 - - - - - centrin 3 [Source:MGI Symbol;Acc:MGI:1097706]
70. Ndufv2 ENSMUSG00000024099 5352 0.72 - 0.720 - - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:MGI Symbol;Acc:MGI:1920150]
71. Mfap1a ENSMUSG00000068479 1469 0.72 0.720 - - - - - microfibrillar-associated protein 1A [Source:MGI Symbol;Acc:MGI:1914782]
72. Ap3d1 ENSMUSG00000020198 2925 0.719 0.719 - - - - - adaptor-related protein complex 3, delta 1 subunit [Source:MGI Symbol;Acc:MGI:107734]
73. Sc5d ENSMUSG00000032018 996 0.719 0.719 - - - - - sterol-C5-desaturase [Source:MGI Symbol;Acc:MGI:1353611]
74. E2f8 ENSMUSG00000046179 878 0.719 0.719 - - - - - E2F transcription factor 8 [Source:MGI Symbol;Acc:MGI:1922038]
75. Hist1h2ao ENSMUSG00000094248 2177 0.719 0.719 - - - - - histone cluster 1, H2ao [Source:MGI Symbol;Acc:MGI:2448302]
76. Zmym2 ENSMUSG00000021945 4864 0.719 0.719 - - - - - zinc finger, MYM-type 2 [Source:MGI Symbol;Acc:MGI:1923257]
77. Rapgef2 ENSMUSG00000062232 891 0.718 0.718 - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:2659071]
78. Slc39a9 ENSMUSG00000048833 2916 0.717 0.717 - - - - - solute carrier family 39 (zinc transporter), member 9 [Source:MGI Symbol;Acc:MGI:1914820]
79. Gm14017 ENSMUSG00000081967 689 0.716 0.716 - - - - - predicted gene 14017 [Source:MGI Symbol;Acc:MGI:3702155]
80. Sqstm1 ENSMUSG00000015837 4567 0.716 0.716 - - - - - sequestosome 1 [Source:MGI Symbol;Acc:MGI:107931]
81. Zfp277 ENSMUSG00000055917 956 0.716 0.716 - - - - - zinc finger protein 277 [Source:MGI Symbol;Acc:MGI:1890393]
82. Cyth2 ENSMUSG00000003269 2474 0.714 0.714 - - - - - cytohesin 2 [Source:MGI Symbol;Acc:MGI:1334255]
83. Ski ENSMUSG00000029050 6956 0.714 - 0.714 - - - - ski sarcoma viral oncogene homolog (avian) [Source:MGI Symbol;Acc:MGI:98310]
84. Exoc7 ENSMUSG00000020792 1779 0.713 0.713 - - - - - exocyst complex component 7 [Source:MGI Symbol;Acc:MGI:1859270]
85. Pxdn ENSMUSG00000020674 5339 0.712 - 0.712 - - - - peroxidasin [Source:MGI Symbol;Acc:MGI:1916925]
86. Prpf31 ENSMUSG00000008373 2901 0.712 0.712 - - - - - pre-mRNA processing factor 31 [Source:MGI Symbol;Acc:MGI:1916238]
87. Atxn1l ENSMUSG00000069895 1128 0.711 0.711 - - - - - ataxin 1-like [Source:MGI Symbol;Acc:MGI:3694797]
88. Ndufa8 ENSMUSG00000026895 8108 0.711 0.711 - - - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:MGI Symbol;Acc:MGI:1915625]
89. Exoc6b ENSMUSG00000033769 1139 0.711 0.711 - - - - - exocyst complex component 6B [Source:MGI Symbol;Acc:MGI:1923164]
90. Tmem60 ENSMUSG00000045435 2595 0.709 0.709 - - - - - transmembrane protein 60 [Source:MGI Symbol;Acc:MGI:2673965]
91. Ldlrad3 ENSMUSG00000048058 3820 0.709 - 0.709 - - - - low density lipoprotein receptor class A domain containing 3 [Source:MGI Symbol;Acc:MGI:2138856]
92. Mar-02 Mar-02 1603 0.708 0.708 - - - - -
93. Atg16l1 ENSMUSG00000026289 1129 0.708 0.708 - - - - - autophagy related 16-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924290]
94. Mrpl41 ENSMUSG00000036850 2477 0.708 0.708 - - - - - mitochondrial ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1333816]
95. 5830417I10Rik ENSMUSG00000078684 1748 0.708 0.708 - - - - - RIKEN cDNA 5830417I10 gene [Source:MGI Symbol;Acc:MGI:1923272]
96. Usp32 ENSMUSG00000000804 1121 0.707 0.707 - - - - - ubiquitin specific peptidase 32 [Source:MGI Symbol;Acc:MGI:2144475]
97. Mthfd1 ENSMUSG00000021048 2041 0.707 0.707 - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase [Source:MGI Symbol;Acc:MGI:1342005]
98. Prpf3 ENSMUSG00000015748 1936 0.706 0.706 - - - - - pre-mRNA processing factor 3 [Source:MGI Symbol;Acc:MGI:1918017]
99. Cpd ENSMUSG00000020841 2083 0.706 0.706 - - - - - carboxypeptidase D [Source:MGI Symbol;Acc:MGI:107265]
100. Ralb ENSMUSG00000004451 1130 0.706 0.706 - - - - - v-ral simian leukemia viral oncogene B [Source:MGI Symbol;Acc:MGI:1927244]

There are 17 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA