Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rtn1

Gene Name Gene ID Reads Annotation
Rtn1 ENSMUSG00000021087 2547 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]







Genes with expression patterns similar to Rtn1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rtn1 ENSMUSG00000021087 2547 6 1.000 1.000 1.000 1.000 1.000 1.000 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
2. Stmn2 ENSMUSG00000027500 6200 5.387 0.803 0.838 0.932 0.935 0.933 0.946 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
3. Tubb3 ENSMUSG00000062380 9211 5.283 0.880 0.919 0.839 0.906 0.870 0.869 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
4. Nefl ENSMUSG00000022055 4031 5.281 0.808 0.886 0.879 0.865 0.934 0.909 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
5. Dcx ENSMUSG00000031285 1733 5.188 0.794 0.885 0.858 0.897 0.944 0.810 doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
6. Myt1 ENSMUSG00000010505 661 5.182 0.852 0.891 0.866 0.877 0.823 0.873 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
7. Ina ENSMUSG00000034336 3835 5.151 0.821 0.902 0.866 0.879 0.888 0.795 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
8. Stmn3 ENSMUSG00000027581 1327 5.111 0.820 0.745 0.811 0.884 0.931 0.920 stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
9. Mllt11 ENSMUSG00000053192 1776 5.079 0.786 0.813 0.802 0.827 0.942 0.909 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
10. Nefm ENSMUSG00000022054 2534 5.073 0.844 0.815 0.839 0.746 0.924 0.905 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
11. Elavl3 ENSMUSG00000003410 2830 5.057 0.879 0.811 0.877 0.842 0.839 0.809 ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
12. Cadps ENSMUSG00000054423 870 5.029 0.776 0.807 0.802 0.864 0.874 0.906 Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
13. Rufy3 ENSMUSG00000029291 695 5.001 0.774 0.831 0.805 0.788 0.915 0.888 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
14. Ap3b2 ENSMUSG00000062444 565 4.846 0.805 0.773 0.719 0.844 0.880 0.825 adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
15. Scg3 ENSMUSG00000032181 445 4.523 0.712 0.758 0.744 0.705 0.848 0.756 secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
16. Elavl4 ENSMUSG00000028546 6084 4.346 - 0.884 0.851 0.867 0.842 0.902 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
17. Crmp1 ENSMUSG00000029121 3165 4.334 - 0.882 0.836 0.850 0.877 0.889 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
18. Elavl2 ENSMUSG00000008489 2109 4.201 0.886 0.904 - 0.814 0.788 0.809 ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
19. Tagln3 ENSMUSG00000022658 6054 4.193 - 0.829 0.830 0.827 0.837 0.870 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
20. Mapt ENSMUSG00000018411 1834 4.189 0.818 - 0.805 0.807 0.899 0.860 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
21. Nmnat2 ENSMUSG00000042751 205 4.188 0.739 - 0.843 0.810 0.871 0.925 nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
22. Gap43 ENSMUSG00000047261 5946 4.183 - 0.784 0.818 0.790 0.915 0.876 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
23. Neurod4 ENSMUSG00000048015 764 4.156 0.880 0.846 0.842 0.763 - 0.825 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
24. Uchl1 ENSMUSG00000029223 2803 4.149 - 0.799 0.818 0.789 0.863 0.880 ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
25. Sncg ENSMUSG00000023064 1702 4.14 - 0.827 0.765 0.842 0.899 0.807 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
26. Gng3 ENSMUSG00000071658 2104 4.107 0.759 - 0.766 0.876 0.795 0.911 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
27. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 4.07 0.791 0.862 0.807 0.855 - 0.755 cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
28. Akap6 ENSMUSG00000061603 420 4.031 0.814 0.715 - 0.803 0.847 0.852 A kinase (PRKA) anchor protein 6 [Source:MGI Symbol;Acc:MGI:3050566]
29. Kif5a ENSMUSG00000074657 425 3.943 - 0.823 0.774 0.800 0.798 0.748 kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
30. Rbfox3 ENSMUSG00000025576 384 3.939 - 0.772 0.725 0.754 0.799 0.889 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
31. Apba2 ENSMUSG00000030519 840 3.879 0.829 0.747 0.817 - 0.784 0.702 amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
32. Nsg2 ENSMUSG00000020297 1718 3.871 0.731 - 0.768 0.782 0.870 0.720 neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
33. Nkx6-1 ENSMUSG00000035187 377 3.837 0.771 0.728 0.873 - 0.714 0.751 NK6 homeobox 1 [Source:MGI Symbol;Acc:MGI:1206039]
34. Lhx3 ENSMUSG00000026934 117 3.768 0.705 0.747 - 0.773 0.794 0.749 LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
35. Cdk5r1 ENSMUSG00000048895 2376 3.443 0.750 - - 0.859 0.906 0.928 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
36. Dpysl5 ENSMUSG00000029168 2096 3.414 0.868 - 0.844 0.817 0.885 - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
37. Map2 ENSMUSG00000015222 2576 3.404 0.905 0.885 0.795 0.819 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
38. Actl6b ENSMUSG00000029712 203 3.385 - 0.760 - 0.888 0.880 0.857 actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
39. Fez1 ENSMUSG00000032118 2537 3.325 - - 0.729 0.843 0.887 0.866 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
40. Spock2 ENSMUSG00000058297 1096 3.278 - - 0.735 0.810 0.873 0.860 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
41. L1cam ENSMUSG00000031391 813 3.273 - 0.787 - 0.774 0.873 0.839 L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]
42. Tuba1a ENSMUSG00000072235 51129 3.265 - 0.761 0.875 0.868 0.761 - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
43. Tubb2b ENSMUSG00000045136 41060 3.264 - - 0.817 0.823 0.803 0.821 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
44. Nova2 ENSMUSG00000030411 400 3.251 - 0.823 0.828 0.796 - 0.804 neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
45. Mapk8ip2 ENSMUSG00000022619 910 3.245 - - 0.736 0.765 0.887 0.857 mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
46. Rundc3a ENSMUSG00000006575 421 3.241 0.781 0.831 - - 0.851 0.778 RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
47. Syn1 ENSMUSG00000037217 289 3.236 - - 0.754 0.799 0.821 0.862 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
48. Slc10a4 ENSMUSG00000029219 550 3.199 - 0.862 0.790 - 0.821 0.726 solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
49. St18 ENSMUSG00000033740 408 3.176 0.880 0.747 0.786 - 0.763 - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
50. Btbd17 ENSMUSG00000000202 565 3.17 0.765 - 0.861 - 0.757 0.787 BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
51. Ncan ENSMUSG00000002341 521 3.169 0.794 - 0.796 - 0.847 0.732 neurocan [Source:MGI Symbol;Acc:MGI:104694]
52. Basp1 ENSMUSG00000045763 22946 3.155 - 0.730 - 0.789 0.820 0.816 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
53. Trp53i11 ENSMUSG00000068735 15944 3.144 0.841 0.793 0.786 0.724 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
54. Rab3c ENSMUSG00000021700 370 3.129 - 0.714 - 0.788 0.810 0.817 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
55. Disp2 ENSMUSG00000040035 230 3.097 - - 0.749 0.805 0.749 0.794 dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
56. Snrpn ENSMUSG00000102252 2727 3.094 0.730 - 0.768 0.751 0.845 - small nuclear ribonucleoprotein N [Source:MGI Symbol;Acc:MGI:98347]
57. Nhlh1 ENSMUSG00000051251 2017 3.07 0.802 0.743 0.778 0.747 - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
58. Onecut2 ENSMUSG00000045991 2334 3.066 0.834 0.743 - - 0.726 0.763 one cut domain, family member 2 [Source:MGI Symbol;Acc:MGI:1891408]
59. Rhbdl3 ENSMUSG00000017692 783 3.014 0.770 0.706 0.781 - - 0.757 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
60. Npdc1 ENSMUSG00000015094 564 2.996 - 0.737 0.791 - 0.739 0.729 neural proliferation, differentiation and control 1 [Source:MGI Symbol;Acc:MGI:1099802]
61. Crtac1 ENSMUSG00000042401 228 2.948 0.706 0.785 - 0.720 - 0.737 cartilage acidic protein 1 [Source:MGI Symbol;Acc:MGI:1920082]
62. Nrarp ENSMUSG00000078202 1708 2.882 0.733 - 0.704 0.740 0.705 - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
63. Soga3 ENSMUSG00000038916 3972 2.631 - - 0.945 0.818 0.868 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
64. Fgfbp3 ENSMUSG00000047632 2036 2.553 - - - 0.860 0.833 0.860 fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
65. Dpysl3 ENSMUSG00000024501 7004 2.535 - - - 0.804 0.882 0.849 dihydropyrimidinase-like 3 [Source:MGI Symbol;Acc:MGI:1349762]
66. Apc2 ENSMUSG00000020135 328 2.499 - 0.803 - - 0.833 0.863 adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
67. A930011O12Rik A930011O12Rik 359 2.494 - - 0.818 0.811 - 0.865
68. Kif5c ENSMUSG00000026764 1283 2.489 - - - 0.775 0.894 0.820 kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
69. Ttyh1 ENSMUSG00000030428 279 2.467 - - - 0.861 0.817 0.789 tweety family member 1 [Source:MGI Symbol;Acc:MGI:1889007]
70. Nhlh2 ENSMUSG00000048540 1310 2.462 0.867 0.801 0.794 - - - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
71. Sp8 ENSMUSG00000048562 219 2.449 0.755 - - - 0.827 0.867 trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
72. Ube2ql1 ENSMUSG00000052981 312 2.442 - - 0.740 - 0.822 0.880 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:MGI Symbol;Acc:MGI:1924230]
73. Acot7 ENSMUSG00000028937 5139 2.43 - - 0.857 0.758 - 0.815 acyl-CoA thioesterase 7 [Source:MGI Symbol;Acc:MGI:1917275]
74. Prdm8 ENSMUSG00000035456 310 2.418 - 0.730 - 0.864 0.824 - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
75. Snap25 ENSMUSG00000027273 427 2.378 - - - 0.704 0.847 0.827 synaptosomal-associated protein 25 [Source:MGI Symbol;Acc:MGI:98331]
76. Map1b ENSMUSG00000052727 28977 2.377 0.755 - - 0.879 0.743 - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
77. Dll3 ENSMUSG00000003436 1086 2.367 0.871 0.760 0.736 - - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
78. Gprin1 ENSMUSG00000069227 1013 2.367 - 0.767 - 0.814 - 0.786 G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
79. Scn3a ENSMUSG00000057182 420 2.361 0.732 0.755 - - 0.874 - sodium channel, voltage-gated, type III, alpha [Source:MGI Symbol;Acc:MGI:98249]
80. Tubb4a ENSMUSG00000062591 500 2.35 0.754 0.783 - - - 0.813 tubulin, beta 4A class IVA [Source:MGI Symbol;Acc:MGI:107848]
81. Rbfox1 ENSMUSG00000008658 758 2.323 - 0.787 - - 0.741 0.795 RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:MGI Symbol;Acc:MGI:1926224]
82. Gdap1 ENSMUSG00000025777 166 2.321 - - - 0.858 0.720 0.743 ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
83. Srgap3 ENSMUSG00000030257 2941 2.313 0.718 - 0.765 - - 0.830 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
84. Fam57b ENSMUSG00000058966 243 2.303 - - - 0.733 0.728 0.842 family with sequence similarity 57, member B [Source:MGI Symbol;Acc:MGI:1916202]
85. Kcnq2 ENSMUSG00000016346 94 2.302 - - 0.766 - 0.745 0.791 potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
86. Fam19a5 ENSMUSG00000054863 859 2.302 - 0.803 0.747 - - 0.752 family with sequence similarity 19, member A5 [Source:MGI Symbol;Acc:MGI:2146182]
87. Isl2 ENSMUSG00000032318 488 2.294 0.741 0.800 - - 0.753 - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
88. Kif1a ENSMUSG00000014602 1538 2.292 - 0.808 - 0.760 - 0.724 kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
89. Trim67 ENSMUSG00000036913 70 2.283 - - 0.713 - 0.781 0.789 tripartite motif-containing 67 [Source:MGI Symbol;Acc:MGI:3045323]
90. 3110035E14Rik 204 2.283 - - - 0.788 0.769 0.726 RIKEN cDNA 3110035E14 gene
91. Nfasc ENSMUSG00000026442 356 2.266 0.787 0.743 - - - 0.736 neurofascin [Source:MGI Symbol;Acc:MGI:104753]
92. Arhgap36 ENSMUSG00000036198 404 2.256 0.722 0.735 0.799 - - - Rho GTPase activating protein 36 [Source:MGI Symbol;Acc:MGI:1922654]
93. Fam155a ENSMUSG00000079157 182 2.231 - - - 0.704 0.824 0.703 family with sequence similarity 155, member A [Source:MGI Symbol;Acc:MGI:2142765]
94. Scg2 ENSMUSG00000050711 91 2.217 - 0.767 - - 0.747 0.703 secretogranin II [Source:MGI Symbol;Acc:MGI:103033]
95. Nyap2 ENSMUSG00000054976 115 2.215 0.714 - - - 0.791 0.710 neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 [Source:MGI Symbol;Acc:MGI:2443135]
96. Ngfr ENSMUSG00000000120 1831 2.214 0.723 0.789 0.702 - - - nerve growth factor receptor (TNFR superfamily, member 16) [Source:MGI Symbol;Acc:MGI:97323]
97. Uts2b ENSMUSG00000056423 294 2.173 0.722 - - - 0.750 0.701 urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
98. Rab6b ENSMUSG00000032549 1005 1.751 - - - - 0.910 0.841 RAB6B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:107283]
99. Sptbn2 ENSMUSG00000067889 4571 1.746 - - - - 0.881 0.865 spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
100. 9330159F19Rik ENSMUSG00000004360 464 1.667 - - - - 0.887 0.780 RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]

There are 162 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA