Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rrp9

Gene Name Gene ID Reads Annotation
Rrp9 ENSMUSG00000041506 1492 RRP9, small subunit (SSU) processome component, homolog (yeast) [Source:MGI Symbol;Acc:MGI:2384313]







Genes with expression patterns similar to Rrp9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rrp9 ENSMUSG00000041506 1492 6 1.000 1.000 1.000 1.000 1.000 1.000 RRP9, small subunit (SSU) processome component, homolog (yeast) [Source:MGI Symbol;Acc:MGI:2384313]
2. Rpl21-ps8 ENSMUSG00000061684 3275 1.697 - - - - 0.779 0.918 ribosomal protein L21, pseudogene 8 [Source:MGI Symbol;Acc:MGI:3648345]
3. Ppm1d ENSMUSG00000020525 1303 1.573 - - - - 0.813 0.760 protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
4. Ddx27 ENSMUSG00000017999 1798 1.571 - - - - 0.844 0.727 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:MGI Symbol;Acc:MGI:2385884]
5. Tars ENSMUSG00000022241 2426 1.564 - - - - 0.740 0.824 threonyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:106314]
6. Scamp1 ENSMUSG00000021687 1701 1.507 - - - - 0.796 0.711 secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]
7. Saal1 ENSMUSG00000006763 2057 1.48 - - - - 0.764 0.716 serum amyloid A-like 1 [Source:MGI Symbol;Acc:MGI:1926185]
8. Gm5601 3223 0.947 - - - - - 0.947 predicted pseudogene 5601
9. Nhsl1 ENSMUSG00000039835 1353 0.918 - - - - - 0.918 NHS-like 1 [Source:MGI Symbol;Acc:MGI:106390]
10. Snord47 ENSMUSG00000064968 286 0.887 - - - - 0.887 - small nucleolar RNA, C/D box 47 [Source:MGI Symbol;Acc:MGI:3819537]
11. Slc25a3 ENSMUSG00000061904 12411 0.887 - - - - - 0.887 solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 [Source:MGI Symbol;Acc:MGI:1353498]
12. Lamp1 ENSMUSG00000031447 37711 0.883 - - - - - 0.883 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
13. Cacnb1 ENSMUSG00000020882 736 0.882 - - - - 0.882 - calcium channel, voltage-dependent, beta 1 subunit [Source:MGI Symbol;Acc:MGI:102522]
14. Rnaseh2a ENSMUSG00000052926 1911 0.881 - - - - 0.881 - ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
15. Fgd5 ENSMUSG00000034037 499 0.88 - - - - 0.880 - FYVE, RhoGEF and PH domain containing 5 [Source:MGI Symbol;Acc:MGI:2443369]
16. 5730455P16Rik ENSMUSG00000057181 986 0.88 - - - - 0.880 - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
17. Arpc4 ENSMUSG00000079426 2322 0.877 - - - - - 0.877 actin related protein 2/3 complex, subunit 4 [Source:MGI Symbol;Acc:MGI:1915339]
18. Gm9083 ENSMUSG00000083033 141 0.874 - - - - 0.874 - predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
19. Melk ENSMUSG00000035683 10279 0.873 - - - - - 0.873 maternal embryonic leucine zipper kinase [Source:MGI Symbol;Acc:MGI:106924]
20. Wwtr1 ENSMUSG00000027803 3120 0.873 - - - - - 0.873 WW domain containing transcription regulator 1 [Source:MGI Symbol;Acc:MGI:1917649]
21. Ccdc126 ENSMUSG00000050786 121 0.873 - - - - 0.873 - coiled-coil domain containing 126 [Source:MGI Symbol;Acc:MGI:1889376]
22. Gm14813 ENSMUSG00000082549 69 0.873 - - - - 0.873 - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
23. Snph ENSMUSG00000027457 95 0.873 - - - - 0.873 - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
24. Ppm1f ENSMUSG00000026181 531 0.873 - - - - 0.873 - protein phosphatase 1F (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:1918464]
25. Apitd1 412 0.873 - - - - 0.873 - apoptosis-inducing, TAF9-like domain 1
26. Ppp5c ENSMUSG00000003099 995 0.872 - - - - 0.872 - protein phosphatase 5, catalytic subunit [Source:MGI Symbol;Acc:MGI:102666]
27. Tfpt ENSMUSG00000006335 157 0.872 - - - - 0.872 - TCF3 (E2A) fusion partner [Source:MGI Symbol;Acc:MGI:1916964]
28. Ddah2 ENSMUSG00000007039 9098 0.872 - - - - - 0.872 dimethylarginine dimethylaminohydrolase 2 [Source:MGI Symbol;Acc:MGI:1859016]
29. Kctd10 ENSMUSG00000001098 136 0.872 - - - - 0.872 - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
30. Ampd3 ENSMUSG00000005686 113 0.872 - - - - 0.872 - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
31. Gm26624 ENSMUSG00000097122 753 0.871 - - - - 0.871 - predicted gene, 26624 [Source:MGI Symbol;Acc:MGI:5477118]
32. Tm9sf4 ENSMUSG00000068040 706 0.871 - - - - 0.871 - transmembrane 9 superfamily protein member 4 [Source:MGI Symbol;Acc:MGI:2139220]
33. Gm5644 ENSMUSG00000100104 76 0.871 - - - - 0.871 - predicted gene 5644 [Source:MGI Symbol;Acc:MGI:3646381]
34. Bok ENSMUSG00000026278 242 0.871 - - - - 0.871 - BCL2-related ovarian killer [Source:MGI Symbol;Acc:MGI:1858494]
35. E030013I19Rik ENSMUSG00000086843 118 0.87 - - - - 0.870 - RIKEN cDNA E030013I19 gene [Source:MGI Symbol;Acc:MGI:2443735]
36. Gzmc ENSMUSG00000079186 38 0.87 - - - - 0.870 - granzyme C [Source:MGI Symbol;Acc:MGI:109256]
37. Tbc1d2 ENSMUSG00000039813 51 0.87 - - - - 0.870 - TBC1 domain family, member 2 [Source:MGI Symbol;Acc:MGI:2652885]
38. Sgol1 1886 0.87 - - - - 0.870 - shugoshin-like 1 (S. pombe), transcript variant X2
39. Crem ENSMUSG00000063889 328 0.87 - - - - 0.870 - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
40. Jazf1 ENSMUSG00000063568 47 0.87 - - - - 0.870 - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
41. Vmn1r132 ENSMUSG00000074322 39 0.87 - - - - 0.870 - vomeronasal 1 receptor 132 [Source:MGI Symbol;Acc:MGI:3647009]
42. Pacsin1 ENSMUSG00000040276 185 0.869 - - - - 0.869 - protein kinase C and casein kinase substrate in neurons 1 [Source:MGI Symbol;Acc:MGI:1345181]
43. Ptges2 ENSMUSG00000026820 419 0.869 - - - - 0.869 - prostaglandin E synthase 2 [Source:MGI Symbol;Acc:MGI:1917592]
44. Gm11989 ENSMUSG00000083553 73 0.869 - - - - 0.869 - predicted gene 11989 [Source:MGI Symbol;Acc:MGI:3702318]
45. Ttc37 ENSMUSG00000033991 159 0.869 - - - - 0.869 - tetratricopeptide repeat domain 37 [Source:MGI Symbol;Acc:MGI:2679923]
46. Wnk4 ENSMUSG00000035112 162 0.869 - - - - 0.869 - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
47. Tmem25 ENSMUSG00000002032 100 0.868 - - - - 0.868 - transmembrane protein 25 [Source:MGI Symbol;Acc:MGI:1918937]
48. Fam86 Fam86 655 0.868 - - - - 0.868 -
49. Zc3h6 ENSMUSG00000042851 135 0.868 - - - - 0.868 - zinc finger CCCH type containing 6 [Source:MGI Symbol;Acc:MGI:1926001]
50. Stat2 ENSMUSG00000040033 489 0.868 - - - - 0.868 - signal transducer and activator of transcription 2 [Source:MGI Symbol;Acc:MGI:103039]
51. Grid2 ENSMUSG00000071424 180 0.867 - - - - 0.867 - glutamate receptor, ionotropic, delta 2 [Source:MGI Symbol;Acc:MGI:95813]
52. Gm23913 Gm23913 84 0.867 - - - - 0.867 -
53. Lmbr1 ENSMUSG00000010721 572 0.867 - - - - 0.867 - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
54. Pmel ENSMUSG00000025359 54 0.866 - - - - 0.866 - premelanosome protein [Source:MGI Symbol;Acc:MGI:98301]
55. Srxn1 ENSMUSG00000032802 244 0.866 - - - - 0.866 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104971]
56. Ppp2r5d ENSMUSG00000059409 830 0.865 - - - - 0.865 - protein phosphatase 2, regulatory subunit B', delta [Source:MGI Symbol;Acc:MGI:2388481]
57. Rhag ENSMUSG00000023926 119 0.865 - - - - 0.865 - Rhesus blood group-associated A glycoprotein [Source:MGI Symbol;Acc:MGI:1202713]
58. Txnrd3 ENSMUSG00000000811 405 0.865 - - - - 0.865 - thioredoxin reductase 3 [Source:MGI Symbol;Acc:MGI:2386711]
59. Pla2g3 ENSMUSG00000034579 79 0.864 - - - - 0.864 - phospholipase A2, group III [Source:MGI Symbol;Acc:MGI:2444945]
60. Pnpla2 ENSMUSG00000025509 905 0.864 - - - - - 0.864 patatin-like phospholipase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914103]
61. Cyr61 ENSMUSG00000028195 563 0.864 - - - - 0.864 - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
62. Pigc ENSMUSG00000026698 838 0.864 - - - - 0.864 - phosphatidylinositol glycan anchor biosynthesis, class C [Source:MGI Symbol;Acc:MGI:1914542]
63. Nol11 ENSMUSG00000018433 1497 0.863 - - - - 0.863 - nucleolar protein 11 [Source:MGI Symbol;Acc:MGI:1916229]
64. Mir301 ENSMUSG00000065589 402 0.863 - - - - 0.863 - microRNA 301 [Source:MGI Symbol;Acc:MGI:3619324]
65. Sptb ENSMUSG00000021061 824 0.862 - - - - 0.862 - spectrin beta, erythrocytic [Source:MGI Symbol;Acc:MGI:98387]
66. Kdm2b ENSMUSG00000029475 5574 0.862 - - - - - 0.862 lysine (K)-specific demethylase 2B [Source:MGI Symbol;Acc:MGI:1354737]
67. Epb4.1l3 Epb4.1l3 4534 0.861 - - - - - 0.861
68. Atp5g1 ENSMUSG00000006057 4506 0.861 - - - - - 0.861 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) [Source:MGI Symbol;Acc:MGI:107653]
69. Mnt ENSMUSG00000000282 715 0.861 - - - - 0.861 - max binding protein [Source:MGI Symbol;Acc:MGI:109150]
70. Atr ENSMUSG00000032409 420 0.861 - - - - 0.861 - ataxia telangiectasia and Rad3 related [Source:MGI Symbol;Acc:MGI:108028]
71. Lpin1 ENSMUSG00000020593 407 0.861 - - - - 0.861 - lipin 1 [Source:MGI Symbol;Acc:MGI:1891340]
72. Slc22a23 ENSMUSG00000038267 407 0.86 - - - - 0.860 - solute carrier family 22, member 23 [Source:MGI Symbol;Acc:MGI:1920352]
73. Surf2 ENSMUSG00000014873 372 0.859 - - - - 0.859 - surfeit gene 2 [Source:MGI Symbol;Acc:MGI:98444]
74. Kcnab2 ENSMUSG00000028931 291 0.858 - - - - 0.858 - potassium voltage-gated channel, shaker-related subfamily, beta member 2 [Source:MGI Symbol;Acc:MGI:109239]
75. 1110051M20Rik ENSMUSG00000040591 858 0.858 - - - - - 0.858 RIKEN cDNA 1110051M20 gene [Source:MGI Symbol;Acc:MGI:1915079]
76. Rnf6 ENSMUSG00000029634 1172 0.857 - - - - - 0.857 ring finger protein (C3H2C3 type) 6 [Source:MGI Symbol;Acc:MGI:1921382]
77. Med28 ENSMUSG00000015804 2949 0.857 - - - - 0.857 - mediator complex subunit 28 [Source:MGI Symbol;Acc:MGI:1914249]
78. Fkbp11 ENSMUSG00000003355 578 0.856 - - - - 0.856 - FK506 binding protein 11 [Source:MGI Symbol;Acc:MGI:1913370]
79. 4930480K23Rik ENSMUSG00000097284 105 0.856 - - - - 0.856 - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
80. Fbxo8 ENSMUSG00000038206 1079 0.856 - - - - 0.856 - F-box protein 8 [Source:MGI Symbol;Acc:MGI:1354696]
81. Acsl5 ENSMUSG00000024981 381 0.855 - - - - 0.855 - acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
82. BC026585 1005 0.854 - - - - 0.854 - cDNA sequence BC026585, transcript variant X1
83. Btg1 ENSMUSG00000036478 3720 0.854 - - - - - 0.854 B cell translocation gene 1, anti-proliferative [Source:MGI Symbol;Acc:MGI:88215]
84. Sec14l2 ENSMUSG00000003585 109 0.854 - - - - 0.854 - SEC14-like lipid binding 2 [Source:MGI Symbol;Acc:MGI:1915065]
85. 2610307P16Rik ENSMUSG00000085936 253 0.854 - - - - 0.854 - RIKEN cDNA 2610307P16 gene [Source:MGI Symbol;Acc:MGI:1919768]
86. Fam50a ENSMUSG00000001962 2244 0.854 - - - - 0.854 - family with sequence similarity 50, member A [Source:MGI Symbol;Acc:MGI:1351626]
87. Plxnc1 ENSMUSG00000074785 183 0.853 - - - - 0.853 - plexin C1 [Source:MGI Symbol;Acc:MGI:1890127]
88. Ggps1 ENSMUSG00000021302 1070 0.853 - - - - 0.853 - geranylgeranyl diphosphate synthase 1 [Source:MGI Symbol;Acc:MGI:1341724]
89. Ifi30 ENSMUSG00000031838, ENSMUSG00000110777 708 0.853 - - - - 0.853 - interferon gamma inducible protein 30 [Source:NCBI gene;Acc:65972]
90. Acss2 ENSMUSG00000027605 588 0.852 - - - - 0.852 - acyl-CoA synthetase short-chain family member 2 [Source:MGI Symbol;Acc:MGI:1890410]
91. Ccdc177 ENSMUSG00000062961 159 0.852 - - - - 0.852 - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
92. Rac2 ENSMUSG00000033220 323 0.852 - - - - 0.852 - Rac family small GTPase 2 [Source:MGI Symbol;Acc:MGI:97846]
93. Flii ENSMUSG00000002812 1382 0.85 - - - - - 0.850 flightless I actin binding protein [Source:MGI Symbol;Acc:MGI:1342286]
94. Obfc1 1133 0.85 - - - - 0.850 - oligonucleotide/oligosaccharide-binding fold containing 1, transcript variant X1
95. Gemin5 ENSMUSG00000037275 1605 0.85 - - - - - 0.850 gem nuclear organelle associated protein 5 [Source:MGI Symbol;Acc:MGI:2449311]
96. Lrrc28 ENSMUSG00000030556 515 0.85 - - - - 0.850 - leucine rich repeat containing 28 [Source:MGI Symbol;Acc:MGI:1915689]
97. Slc4a7 ENSMUSG00000021733 3154 0.849 - - - - 0.849 - solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:MGI Symbol;Acc:MGI:2443878]
98. Xpc ENSMUSG00000030094 530 0.848 - - - - 0.848 - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
99. Klc2 ENSMUSG00000024862 582 0.846 - - - - 0.846 - kinesin light chain 2 [Source:MGI Symbol;Acc:MGI:107953]
100. Vta1 ENSMUSG00000019868 1987 0.846 - - - - - 0.846 vesicle (multivesicular body) trafficking 1 [Source:MGI Symbol;Acc:MGI:1913451]

There are 506 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA