Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rab1b

Gene Name Gene ID Reads Annotation
Rab1b ENSMUSG00000024870 4174 RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]







Genes with expression patterns similar to Rab1b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rab1b ENSMUSG00000024870 4174 6 1.000 1.000 1.000 1.000 1.000 1.000 RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]
2. Sgol1 1886 2.519 0.972 - - - 0.835 0.712 shugoshin-like 1 (S. pombe), transcript variant X2
3. Map2k1 ENSMUSG00000004936 3574 2.355 0.925 0.729 - - 0.701 - mitogen-activated protein kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346866]
4. Mbnl2 ENSMUSG00000022139 3296 1.826 0.974 0.852 - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
5. Zzef1 ENSMUSG00000055670 953 1.811 0.967 - - - - 0.844 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
6. Kdm4b ENSMUSG00000024201 1440 1.779 0.965 - - - - 0.814 lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
7. Cdca3 ENSMUSG00000023505 4570 1.774 0.964 0.810 - - - - cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
8. Cd151 ENSMUSG00000025510 2760 1.772 0.964 - - - 0.808 - CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]
9. Atf7ip ENSMUSG00000030213 6338 1.693 0.900 0.793 - - - - activating transcription factor 7 interacting protein [Source:MGI Symbol;Acc:MGI:1858965]
10. AW549877 ENSMUSG00000041935 2924 1.692 0.970 - - - - 0.722 expressed sequence AW549877 [Source:MGI Symbol;Acc:MGI:2146232]
11. Slc7a6 ENSMUSG00000031904 1103 1.685 - 0.816 - - - 0.869 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
12. Dusp2 ENSMUSG00000027368 534 1.682 - 0.838 - - - 0.844 dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
13. Nek9 ENSMUSG00000034290 2314 1.67 0.960 - - - 0.710 - NIMA (never in mitosis gene a)-related expressed kinase 9 [Source:MGI Symbol;Acc:MGI:2387995]
14. Epb4.1l4a Epb4.1l4a 1817 1.666 0.966 - - - - 0.700
15. BC026585 1005 1.656 - - - - 0.826 0.830 cDNA sequence BC026585, transcript variant X1
16. Srsf5 ENSMUSG00000021134 3822 1.653 0.935 0.718 - - - - serine/arginine-rich splicing factor 5 [Source:MGI Symbol;Acc:MGI:98287]
17. 5730455P16Rik ENSMUSG00000057181 986 1.65 - 0.829 - - 0.821 - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
18. 5830418K08Rik 5830418K08Rik 1814 1.648 0.946 0.702 - - - -
19. Med14 ENSMUSG00000064127 1226 1.638 - 0.821 - - - 0.817 mediator complex subunit 14 [Source:MGI Symbol;Acc:MGI:1349442]
20. Mbd1 ENSMUSG00000024561 619 1.623 - - - - 0.772 0.851 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
21. Arl13b ENSMUSG00000022911 824 1.622 - 0.839 - - - 0.783 ADP-ribosylation factor-like 13B [Source:MGI Symbol;Acc:MGI:1915396]
22. B3galtl B3galtl 1530 1.613 - - - - 0.781 0.832
23. BC005624 ENSMUSG00000026851 1591 1.61 - 0.813 - - - 0.797 cDNA sequence BC005624 [Source:MGI Symbol;Acc:MGI:2385132]
24. Leprot ENSMUSG00000035212 3389 1.594 - 0.811 - - - 0.783 leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
25. Recql5 ENSMUSG00000020752 591 1.591 - - - - 0.763 0.828 RecQ protein-like 5 [Source:MGI Symbol;Acc:MGI:2156841]
26. Sptb ENSMUSG00000021061 824 1.556 - - - - 0.819 0.737 spectrin beta, erythrocytic [Source:MGI Symbol;Acc:MGI:98387]
27. Fiz1 ENSMUSG00000061374 2751 1.552 - 0.781 - - - 0.771 Flt3 interacting zinc finger protein 1 [Source:MGI Symbol;Acc:MGI:1344336]
28. Chic2 ENSMUSG00000029229 3175 1.547 - 0.814 - - - 0.733 cysteine-rich hydrophobic domain 2 [Source:MGI Symbol;Acc:MGI:1921527]
29. Socs6 ENSMUSG00000056153 4730 1.545 - 0.740 - - - 0.805 suppressor of cytokine signaling 6 [Source:MGI Symbol;Acc:MGI:1924885]
30. Ddx19a ENSMUSG00000015023 3351 1.533 - 0.814 - - 0.719 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a [Source:MGI Symbol;Acc:MGI:99526]
31. Ubr5 ENSMUSG00000037487 2151 1.533 - 0.821 - - 0.712 - ubiquitin protein ligase E3 component n-recognin 5 [Source:MGI Symbol;Acc:MGI:1918040]
32. Ptdss2 ENSMUSG00000025495 1882 1.532 - 0.772 - - - 0.760 phosphatidylserine synthase 2 [Source:MGI Symbol;Acc:MGI:1351664]
33. Gtf3c6 ENSMUSG00000019837 2716 1.53 - 0.733 - - - 0.797 general transcription factor IIIC, polypeptide 6, alpha [Source:MGI Symbol;Acc:MGI:1914621]
34. Skida1 ENSMUSG00000054074 1796 1.525 - - - - 0.713 0.812 SKI/DACH domain containing 1 [Source:MGI Symbol;Acc:MGI:1919918]
35. Smug1 ENSMUSG00000036061 1056 1.521 - - - - 0.728 0.793 single-strand selective monofunctional uracil DNA glycosylase [Source:MGI Symbol;Acc:MGI:1918976]
36. Vrk3 ENSMUSG00000002205 1453 1.512 - 0.796 - - - 0.716 vaccinia related kinase 3 [Source:MGI Symbol;Acc:MGI:2182465]
37. Ttk ENSMUSG00000038379 2908 1.51 - 0.761 - - - 0.749 Ttk protein kinase [Source:MGI Symbol;Acc:MGI:1194921]
38. Slc25a13 ENSMUSG00000015112 2038 1.498 - - - - 0.758 0.740 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 [Source:MGI Symbol;Acc:MGI:1354721]
39. Gm13826 Gm13826 2764 1.496 - - - - 0.746 0.750
40. Atp6v0b ENSMUSG00000033379 1314 1.457 - - - - 0.715 0.742 ATPase, H+ transporting, lysosomal V0 subunit B [Source:MGI Symbol;Acc:MGI:1890510]
41. Srek1 ENSMUSG00000032621 3541 1.45 - 0.740 - - - 0.710 splicing regulatory glutamine/lysine-rich protein 1 [Source:MGI Symbol;Acc:MGI:2145245]
42. Nhlrc2 ENSMUSG00000025078 1180 0.978 0.978 - - - - - NHL repeat containing 2 [Source:MGI Symbol;Acc:MGI:1914116]
43. AI846148 3356 0.977 0.977 - - - - - expressed sequence AI846148, transcript variant X2
44. Pno1 ENSMUSG00000020116 5621 0.976 0.976 - - - - - partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
45. Bod1l ENSMUSG00000061755 2689 0.976 0.976 - - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
46. Kalrn ENSMUSG00000061751 1798 0.976 0.976 - - - - - kalirin, RhoGEF kinase [Source:MGI Symbol;Acc:MGI:2685385]
47. Chuk ENSMUSG00000025199 1732 0.975 0.975 - - - - - conserved helix-loop-helix ubiquitous kinase [Source:MGI Symbol;Acc:MGI:99484]
48. Med8 ENSMUSG00000006392 1655 0.975 0.975 - - - - - mediator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1915269]
49. Cnot11 ENSMUSG00000003135 1391 0.974 0.974 - - - - - CCR4-NOT transcription complex, subunit 11 [Source:MGI Symbol;Acc:MGI:106580]
50. Haus8 ENSMUSG00000035439 1485 0.974 0.974 - - - - - 4HAUS augmin-like complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1923728]
51. Stag2 ENSMUSG00000025862 3862 0.974 0.974 - - - - - stromal antigen 2 [Source:MGI Symbol;Acc:MGI:1098583]
52. Clp1 ENSMUSG00000027079 3327 0.974 0.974 - - - - - CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]
53. Gatad1 ENSMUSG00000007415 3350 0.973 0.973 - - - - - GATA zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1914460]
54. Zfp574 ENSMUSG00000045252 1410 0.973 0.973 - - - - - zinc finger protein 574 [Source:MGI Symbol;Acc:MGI:2442951]
55. H1f0 ENSMUSG00000096210 6629 0.973 0.973 - - - - - H1 histone family, member 0 [Source:MGI Symbol;Acc:MGI:95893]
56. Lrrc42 ENSMUSG00000028617 1235 0.973 0.973 - - - - - leucine rich repeat containing 42 [Source:MGI Symbol;Acc:MGI:1925059]
57. Cwc27 ENSMUSG00000021715 899 0.973 0.973 - - - - - CWC27 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914535]
58. Ets1 ENSMUSG00000032035 1513 0.972 0.972 - - - - - E26 avian leukemia oncogene 1, 5' domain [Source:MGI Symbol;Acc:MGI:95455]
59. Ccdc174 ENSMUSG00000034083 1439 0.972 0.972 - - - - - coiled-coil domain containing 174 [Source:MGI Symbol;Acc:MGI:2444652]
60. Rhot1 ENSMUSG00000017686 4099 0.971 0.971 - - - - - ras homolog family member T1 [Source:MGI Symbol;Acc:MGI:1926078]
61. Nit2 ENSMUSG00000022751 895 0.971 0.971 - - - - - nitrilase family, member 2 [Source:MGI Symbol;Acc:MGI:1261838]
62. Gm10177 ENSMUSG00000090136 864 0.971 0.971 - - - - - predicted gene 10177 [Source:MGI Symbol;Acc:MGI:3704330]
63. Bub1 ENSMUSG00000027379 1882 0.969 0.969 - - - - - BUB1, mitotic checkpoint serine/threonine kinase [Source:MGI Symbol;Acc:MGI:1100510]
64. Dqx1 ENSMUSG00000009145 545 0.969 0.969 - - - - - DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
65. Spast ENSMUSG00000024068 2727 0.969 0.969 - - - - - spastin [Source:MGI Symbol;Acc:MGI:1858896]
66. Gm13680 ENSMUSG00000081400 447 0.969 0.969 - - - - - predicted gene 13680 [Source:MGI Symbol;Acc:MGI:3652285]
67. Ly75 ENSMUSG00000026980 766 0.969 0.969 - - - - - lymphocyte antigen 75 [Source:MGI Symbol;Acc:MGI:106662]
68. Ccdc166 ENSMUSG00000098176 524 0.969 0.969 - - - - - coiled-coil domain containing 166 [Source:MGI Symbol;Acc:MGI:1925902]
69. 2310061I04Rik ENSMUSG00000050705 1463 0.968 0.968 - - - - - RIKEN cDNA 2310061I04 gene [Source:MGI Symbol;Acc:MGI:1916912]
70. Ucp2 ENSMUSG00000033685 2664 0.968 0.968 - - - - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
71. Ebf4 ENSMUSG00000053552 463 0.968 0.968 - - - - - early B cell factor 4 [Source:MGI Symbol;Acc:MGI:2385972]
72. Nlrx1 ENSMUSG00000032109 363 0.968 0.968 - - - - - NLR family member X1 [Source:MGI Symbol;Acc:MGI:2429611]
73. Rprm ENSMUSG00000075334 1010 0.968 0.968 - - - - - reprimo, TP53 dependent G2 arrest mediator candidate [Source:MGI Symbol;Acc:MGI:1915124]
74. Fsd1 ENSMUSG00000011589 902 0.968 0.968 - - - - - fibronectin type 3 and SPRY domain-containing protein [Source:MGI Symbol;Acc:MGI:1934858]
75. Tmem8 ENSMUSG00000024180 228 0.967 0.967 - - - - - transmembrane protein 8 (five membrane-spanning domains) [Source:MGI Symbol;Acc:MGI:1926283]
76. Yod1 ENSMUSG00000046404 793 0.967 0.967 - - - - - YOD1 deubiquitinase [Source:MGI Symbol;Acc:MGI:2442596]
77. Sos2 ENSMUSG00000034801 3613 0.967 0.967 - - - - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:MGI Symbol;Acc:MGI:98355]
78. Poldip2 ENSMUSG00000001100 3214 0.967 0.967 - - - - - polymerase (DNA-directed), delta interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915061]
79. Cep68 ENSMUSG00000044066 1055 0.967 0.967 - - - - - centrosomal protein 68 [Source:MGI Symbol;Acc:MGI:2667663]
80. Lnx2 ENSMUSG00000016520 439 0.967 0.967 - - - - - ligand of numb-protein X 2 [Source:MGI Symbol;Acc:MGI:2155959]
81. Hdac9 ENSMUSG00000004698 287 0.967 0.967 - - - - - histone deacetylase 9 [Source:MGI Symbol;Acc:MGI:1931221]
82. Gm6483 ENSMUSG00000087153 1875 0.966 0.966 - - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
83. Adam15 ENSMUSG00000028041 630 0.966 0.966 - - - - - a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]
84. Lmna ENSMUSG00000028063 622 0.966 0.966 - - - - - lamin A [Source:MGI Symbol;Acc:MGI:96794]
85. Mettl15 ENSMUSG00000057234 379 0.966 0.966 - - - - - methyltransferase like 15 [Source:MGI Symbol;Acc:MGI:1924144]
86. Gm12521 Gm12521 210 0.966 0.966 - - - - -
87. Hipk1 ENSMUSG00000008730 2363 0.965 0.965 - - - - - homeodomain interacting protein kinase 1 [Source:MGI Symbol;Acc:MGI:1314873]
88. Sh3gl3 ENSMUSG00000030638 2388 0.965 0.965 - - - - - SH3-domain GRB2-like 3 [Source:MGI Symbol;Acc:MGI:700011]
89. Cnot2 ENSMUSG00000020166 5331 0.965 0.965 - - - - - CCR4-NOT transcription complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1919318]
90. Dpep1 ENSMUSG00000019278 422 0.965 0.965 - - - - - dipeptidase 1 (renal) [Source:MGI Symbol;Acc:MGI:94917]
91. Cenpm ENSMUSG00000068101 2118 0.965 0.965 - - - - - centromere protein M [Source:MGI Symbol;Acc:MGI:1913820]
92. 2010003O02Rik 2010003O02Rik 2896 0.965 0.965 - - - - -
93. Cenpl ENSMUSG00000026708 1567 0.965 0.965 - - - - - centromere protein L [Source:MGI Symbol;Acc:MGI:1917704]
94. Txndc17 ENSMUSG00000020803 3761 0.964 0.964 - - - - - thioredoxin domain containing 17 [Source:MGI Symbol;Acc:MGI:1289248]
95. 1110001J03Rik 2404 0.964 0.964 - - - - - RIKEN cDNA 1110001J03 gene
96. Zkscan1 ENSMUSG00000029729 2845 0.963 0.963 - - - - - zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
97. Stau1 ENSMUSG00000039536 3392 0.963 0.963 - - - - - staufen double-stranded RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1338864]
98. Rock2 ENSMUSG00000020580 3652 0.963 0.963 - - - - - Rho-associated coiled-coil containing protein kinase 2 [Source:MGI Symbol;Acc:MGI:107926]
99. Ppp1r2 ENSMUSG00000047714 2776 0.962 0.962 - - - - - protein phosphatase 1, regulatory inhibitor subunit 2 [Source:MGI Symbol;Acc:MGI:1914099]
100. Tgoln1 ENSMUSG00000056429 3152 0.962 0.962 - - - - - trans-golgi network protein [Source:MGI Symbol;Acc:MGI:105080]

There are 982 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA