Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Pax3

Gene Name Gene ID Reads Annotation
Pax3 ENSMUSG00000004872 3095 paired box 3 [Source:MGI Symbol;Acc:MGI:97487]







Genes with expression patterns similar to Pax3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pax3 ENSMUSG00000004872 3095 6 1.000 1.000 1.000 1.000 1.000 1.000 paired box 3 [Source:MGI Symbol;Acc:MGI:97487]
2. Draxin ENSMUSG00000029005 726 3.893 0.782 0.722 - 0.794 0.864 0.731 dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
3. Sox2 ENSMUSG00000074637 8409 3.407 0.861 0.847 - 0.889 - 0.810 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
4. Hoxd3 ENSMUSG00000079277 3066 3.262 - - 0.778 0.732 0.897 0.855 homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]
5. Ckb ENSMUSG00000001270 8443 3.215 0.800 0.724 - 0.838 - 0.853 creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
6. Ildr2 ENSMUSG00000040612 1142 3.184 0.850 0.737 - 0.866 - 0.731 immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
7. Jam2 ENSMUSG00000053062 1020 3.129 0.732 0.703 - 0.798 0.896 - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
8. Zic3 ENSMUSG00000067860 549 2.568 0.817 0.824 - 0.927 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
9. C130071C03Rik ENSMUSG00000050334 1582 2.515 0.823 0.815 - 0.877 - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
10. Pou3f2 ENSMUSG00000095139 2416 2.459 0.848 0.774 - 0.837 - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
11. Gbx2 ENSMUSG00000034486 478 2.419 0.885 0.736 - 0.798 - - gastrulation brain homeobox 2 [Source:MGI Symbol;Acc:MGI:95668]
12. Fzd10 ENSMUSG00000081683 998 2.415 - 0.762 0.751 0.902 - - frizzled class receptor 10 [Source:MGI Symbol;Acc:MGI:2136761]
13. Sox3 ENSMUSG00000045179 1137 2.41 0.786 - 0.728 0.896 - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
14. Slc1a2 ENSMUSG00000005089 830 2.323 0.714 - - 0.762 - 0.847 solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
15. Hoxb9 ENSMUSG00000020875 2764 2.314 0.769 - 0.746 0.799 - - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
16. Pou3f3 ENSMUSG00000045515 5137 2.264 - 0.705 0.710 0.849 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
17. Nedd9 ENSMUSG00000021365 1501 2.242 0.790 0.736 - 0.716 - - neural precursor cell expressed, developmentally down-regulated gene 9 [Source:MGI Symbol;Acc:MGI:97302]
18. Nrarp ENSMUSG00000078202 1708 2.191 0.765 - - 0.719 - 0.707 Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
19. Tfap2b ENSMUSG00000025927 1305 2.175 - - 0.704 0.732 0.739 - transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]
20. Scube2 ENSMUSG00000007279 406 1.649 0.840 0.809 - - - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
21. Robo3 ENSMUSG00000032128 389 1.648 - - - 0.851 0.797 - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
22. Zic2 ENSMUSG00000061524 472 1.618 - 0.779 - - 0.839 - zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
23. Crabp2 ENSMUSG00000004885 6976 1.593 - 0.782 0.811 - - - cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
24. Hap1 ENSMUSG00000006930 613 1.583 0.841 0.742 - - - - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
25. Sox1 ENSMUSG00000096014 349 1.567 0.799 - - 0.768 - - SRY (sex determining region Y)-box 1 [Source:MGI Symbol;Acc:MGI:98357]
26. Prdm13 ENSMUSG00000040478 193 1.565 - - 0.780 0.785 - - PR domain containing 13 [Source:MGI Symbol;Acc:MGI:2448528]
27. Hspa4l ENSMUSG00000025757, ENSMUSG00000115951 1283 1.564 0.739 - - - 0.825 - heat shock protein 4 like [Source:MGI Symbol;Acc:MGI:107422]
28. Fabp7 ENSMUSG00000019874 3183 1.55 0.745 - - 0.805 - - fatty acid binding protein 7, brain [Source:MGI Symbol;Acc:MGI:101916]
29. Hoxb1 ENSMUSG00000018973 357 1.548 0.801 - - - 0.747 - homeobox B1 [Source:MGI Symbol;Acc:MGI:96182]
30. Psat1 ENSMUSG00000024640 15774 1.544 0.791 - 0.753 - - - phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
31. Msx3 ENSMUSG00000025469 236 1.533 0.833 - - 0.700 - - msh homeobox 3 [Source:MGI Symbol;Acc:MGI:106587]
32. Sema5b ENSMUSG00000052133 891 1.529 0.722 - - 0.807 - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B [Source:MGI Symbol;Acc:MGI:107555]
33. Pea15a ENSMUSG00000013698 6011 1.518 - - - 0.773 - 0.745 phosphoprotein enriched in astrocytes 15A [Source:MGI Symbol;Acc:MGI:104799]
34. 2510009E07Rik ENSMUSG00000043391 672 1.517 0.800 - - 0.717 - - RIKEN cDNA 2510009E07 gene [Source:MGI Symbol;Acc:MGI:1919440]
35. Spata13 ENSMUSG00000021990 1020 1.514 0.777 - - 0.737 - - spermatogenesis associated 13 [Source:MGI Symbol;Acc:MGI:104838]
36. Zbtb18 ENSMUSG00000063659 1287 1.509 0.795 0.714 - - - - zinc finger and BTB domain containing 18 [Source:MGI Symbol;Acc:MGI:1353609]
37. Gpr98 Gpr98 1797 1.502 0.768 0.734 - - - -
38. Dtx4 ENSMUSG00000039982 2901 1.479 - 0.705 - 0.774 - - deltex 4, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:2672905]
39. Hoxc9 ENSMUSG00000036139 4145 1.473 0.748 - - 0.725 - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
40. Zcchc18 ENSMUSG00000031428 2572 1.472 0.765 - - - 0.707 - zinc finger, CCHC domain containing 18 [Source:MGI Symbol;Acc:MGI:1914245]
41. Bhlhe23 ENSMUSG00000045493 61 1.456 0.716 - - 0.740 - - basic helix-loop-helix family, member e23 [Source:MGI Symbol;Acc:MGI:2153710]
42. Miat ENSMUSG00000097767 4258 1.447 0.714 - - - 0.733 - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
43. Zic1 ENSMUSG00000032368 7734 0.895 - - - 0.895 - - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
44. Dll3 ENSMUSG00000003436 1086 0.891 - - - - 0.891 - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
45. Rfx4 ENSMUSG00000020037 455 0.871 0.871 - - - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
46. Zic4 ENSMUSG00000036972 1968 0.862 - - - 0.862 - - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
47. Phyhipl ENSMUSG00000037747 636 0.861 - - - 0.861 - - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
48. Celsr1 ENSMUSG00000016028 500 0.839 0.839 - - - - - cadherin, EGF LAG seven-pass G-type receptor 1 [Source:MGI Symbol;Acc:MGI:1100883]
49. Emid1 ENSMUSG00000034164 456 0.82 - - - 0.820 - - EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:2155091]
50. Jam3 ENSMUSG00000031990 5781 0.818 - - - - 0.818 - junction adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1933825]
51. Lmx1b ENSMUSG00000038765 683 0.813 - - - 0.813 - - LIM homeobox transcription factor 1 beta [Source:MGI Symbol;Acc:MGI:1100513]
52. Tspan18 ENSMUSG00000027217 3290 0.809 0.809 - - - - - tetraspanin 18 [Source:MGI Symbol;Acc:MGI:1917186]
53. Hoxd1 ENSMUSG00000042448 332 0.809 - - - 0.809 - - homeobox D1 [Source:MGI Symbol;Acc:MGI:96201]
54. Msi1 ENSMUSG00000054256 13785 0.802 - - - 0.802 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
55. Zfp536 ENSMUSG00000043456 869 0.802 - - - - 0.802 - zinc finger protein 536 [Source:MGI Symbol;Acc:MGI:1926102]
56. A730017C20Rik ENSMUSG00000050875 517 0.8 0.800 - - - - - RIKEN cDNA A730017C20 gene [Source:MGI Symbol;Acc:MGI:2442934]
57. Slain1 ENSMUSG00000055717 237 0.799 0.799 - - - - - SLAIN motif family, member 1 [Source:MGI Symbol;Acc:MGI:2145578]
58. Pcdh8 ENSMUSG00000036422 452 0.796 0.796 - - - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
59. Zfand5 ENSMUSG00000024750 6972 0.793 - - - - 0.793 - zinc finger, AN1-type domain 5 [Source:MGI Symbol;Acc:MGI:1278334]
60. Lbx1 ENSMUSG00000025216 160 0.79 - - 0.790 - - - ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104867]
61. Itgb8 ENSMUSG00000025321 698 0.786 0.786 - - - - - integrin beta 8 [Source:MGI Symbol;Acc:MGI:1338035]
62. Cdc25b ENSMUSG00000027330 1004 0.785 - - - - 0.785 - cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
63. Celsr2 ENSMUSG00000068740 2010 0.781 - - - 0.781 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
64. Boc ENSMUSG00000022687 1364 0.781 - - 0.781 - - - biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein [Source:MGI Symbol;Acc:MGI:2151153]
65. Tbc1d9 ENSMUSG00000031709 688 0.78 - - - - 0.780 - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
66. Chrna4 ENSMUSG00000027577 941 0.779 - - - - 0.779 - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
67. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.779 - - - - 0.779 - dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
68. Ak4 ENSMUSG00000028527 973 0.771 0.771 - - - - - adenylate kinase 4 [Source:MGI Symbol;Acc:MGI:87979]
69. Hoxc8 ENSMUSG00000001657 16443 0.771 - - - - 0.771 - homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
70. Metrn ENSMUSG00000002274 764 0.771 0.771 - - - - - meteorin, glial cell differentiation regulator [Source:MGI Symbol;Acc:MGI:1917333]
71. Chst1 ENSMUSG00000027221 323 0.77 0.770 - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1924219]
72. Irx2 ENSMUSG00000001504 819 0.767 0.767 - - - - - Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]
73. Cdca3 ENSMUSG00000023505 4570 0.767 - - - - 0.767 - cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
74. Pde7a ENSMUSG00000069094 2633 0.766 - - - - 0.766 - phosphodiesterase 7A [Source:MGI Symbol;Acc:MGI:1202402]
75. Mycl ENSMUSG00000028654 904 0.761 - - - - 0.761 - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
76. Pou3f4 ENSMUSG00000056854 95 0.761 0.761 - - - - - POU domain, class 3, transcription factor 4 [Source:MGI Symbol;Acc:MGI:101894]
77. Bbip1 ENSMUSG00000084957 1639 0.76 - - - - 0.760 - BBSome interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913610]
78. Rtn3 ENSMUSG00000024758 11055 0.76 - - - - 0.760 - reticulon 3 [Source:MGI Symbol;Acc:MGI:1339970]
79. Jakmip2 ENSMUSG00000024502 742 0.759 - - - - 0.759 - janus kinase and microtubule interacting protein 2 [Source:MGI Symbol;Acc:MGI:1923467]
80. Slc38a1 ENSMUSG00000023169 5594 0.756 - - - - 0.756 - solute carrier family 38, member 1 [Source:MGI Symbol;Acc:MGI:2145895]
81. Pax7 ENSMUSG00000028736 356 0.755 - - 0.755 - - - paired box 7 [Source:MGI Symbol;Acc:MGI:97491]
82. Gm4799 ENSMUSG00000071151 808 0.755 - - - - 0.755 - predicted gene 4799 [Source:MGI Symbol;Acc:MGI:3648850]
83. Zic5 ENSMUSG00000041703 1240 0.754 - - - 0.754 - - zinc finger protein of the cerebellum 5 [Source:MGI Symbol;Acc:MGI:1929518]
84. Sp5 ENSMUSG00000075304 106 0.754 0.754 - - - - - trans-acting transcription factor 5 [Source:MGI Symbol;Acc:MGI:1927715]
85. Fgf13 ENSMUSG00000031137 365 0.753 - - - - 0.753 - fibroblast growth factor 13 [Source:MGI Symbol;Acc:MGI:109178]
86. Rmst ENSMUSG00000112117 594 0.752 - 0.752 - - - - rhabdomyosarcoma 2 associated transcript (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1099806]
87. Igfbpl1 ENSMUSG00000035551 856 0.75 - - - 0.750 - - insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
88. Casz1 ENSMUSG00000028977 921 0.75 - - - - 0.750 - castor zinc finger 1 [Source:MGI Symbol;Acc:MGI:1196251]
89. Lect1 122 0.749 - - 0.749 - - - leukocyte cell derived chemotaxin 1, transcript variant X3
90. 1300002K09Rik 1300002K09Rik 75 0.749 - - - 0.749 - -
91. Fbxo45 ENSMUSG00000035764 1458 0.749 - - - - 0.749 - F-box protein 45 [Source:MGI Symbol;Acc:MGI:2447775]
92. Faim ENSMUSG00000032463 3379 0.748 - - - - 0.748 - Fas apoptotic inhibitory molecule [Source:MGI Symbol;Acc:MGI:1344387]
93. Hes5 ENSMUSG00000048001 1640 0.747 0.747 - - - - - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
94. Dach1 ENSMUSG00000055639 1422 0.746 0.746 - - - - - dachshund family transcription factor 1 [Source:MGI Symbol;Acc:MGI:1277991]
95. Gm5909 ENSMUSG00000082491 1029 0.746 - - - - 0.746 - predicted gene 5909 [Source:MGI Symbol;Acc:MGI:3646686]
96. H2afj ENSMUSG00000060032 2159 0.746 - - - - 0.746 - H2A histone family, member J [Source:MGI Symbol;Acc:MGI:3606192]
97. Fam64a 1306 0.745 - - - - 0.745 - family with sequence similarity 64, member A, transcript variant X1
98. E2f1 ENSMUSG00000027490 2357 0.745 - - - - 0.745 - E2F transcription factor 1 [Source:MGI Symbol;Acc:MGI:101941]
99. Hes6 ENSMUSG00000067071 1692 0.745 0.745 - - - - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
100. Crabp1 ENSMUSG00000032291 40831 0.745 - - - 0.745 - - cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]

There are 128 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA