Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Nid1

Gene Name Gene ID Reads Annotation
Nid1 ENSMUSG00000005397 2804 nidogen 1 [Source:MGI Symbol;Acc:MGI:97342]







Genes with expression patterns similar to Nid1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Nid1 ENSMUSG00000005397 2804 6 1.000 1.000 1.000 1.000 1.000 1.000 nidogen 1 [Source:MGI Symbol;Acc:MGI:97342]
2. B230354K17Rik ENSMUSG00000097119 2211 1.726 0.875 0.851 - - - - RIKEN cDNA B230354K17 gene [Source:MGI Symbol;Acc:MGI:2443272]
3. Tmem183a ENSMUSG00000042305 2170 1.651 0.936 0.715 - - - - transmembrane protein 183A [Source:MGI Symbol;Acc:MGI:1914729]
4. Zfp148 ENSMUSG00000022811 3100 1.604 0.784 0.820 - - - - zinc finger protein 148 [Source:MGI Symbol;Acc:MGI:1332234]
5. Rras2 ENSMUSG00000055723 3015 1.589 0.876 0.713 - - - - related RAS viral (r-ras) oncogene 2 [Source:MGI Symbol;Acc:MGI:1914172]
6. Lphn2 Lphn2 6084 1.554 0.823 0.731 - - - -
7. Tkt ENSMUSG00000021957 2636 0.952 0.952 - - - - - transketolase [Source:MGI Symbol;Acc:MGI:105992]
8. Ibtk ENSMUSG00000035941 5221 0.949 0.949 - - - - - inhibitor of Bruton agammaglobulinemia tyrosine kinase [Source:MGI Symbol;Acc:MGI:1918677]
9. Rpp14 ENSMUSG00000023156 1874 0.94 0.940 - - - - - ribonuclease P 14 subunit [Source:MGI Symbol;Acc:MGI:1914303]
10. Synj2bp ENSMUSG00000090935 3314 0.938 0.938 - - - - - synaptojanin 2 binding protein [Source:MGI Symbol;Acc:MGI:1344347]
11. Csf1 ENSMUSG00000014599 504 0.937 0.937 - - - - - colony stimulating factor 1 (macrophage) [Source:MGI Symbol;Acc:MGI:1339753]
12. Ccnjl ENSMUSG00000044707 2735 0.935 0.935 - - - - - cyclin J-like [Source:MGI Symbol;Acc:MGI:2685723]
13. Zbed6 ENSMUSG00000102049 568 0.933 0.933 - - - - - zinc finger, BED type containing 6 [Source:MGI Symbol;Acc:MGI:3828086]
14. Tlk2 ENSMUSG00000020694 2900 0.93 0.930 - - - - - tousled-like kinase 2 (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1346023]
15. Rpl34-ps1 ENSMUSG00000068396 3889 0.924 0.924 - - - - - ribosomal protein L34, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3704270]
16. Akap11 ENSMUSG00000022016 2542 0.922 0.922 - - - - - A kinase (PRKA) anchor protein 11 [Source:MGI Symbol;Acc:MGI:2684060]
17. Lphn1 Lphn1 4184 0.922 0.922 - - - - -
18. Scaper ENSMUSG00000034007 913 0.921 0.921 - - - - - S phase cyclin A-associated protein in the ER [Source:MGI Symbol;Acc:MGI:1925976]
19. Slc11a2 ENSMUSG00000023030 1484 0.918 0.918 - - - - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 [Source:MGI Symbol;Acc:MGI:1345279]
20. Zfp358 ENSMUSG00000047264 1441 0.918 0.918 - - - - - zinc finger protein 358 [Source:MGI Symbol;Acc:MGI:2153740]
21. Metap2 ENSMUSG00000036112 7952 0.917 0.917 - - - - - methionine aminopeptidase 2 [Source:MGI Symbol;Acc:MGI:1929701]
22. Pi4k2a ENSMUSG00000025178 1128 0.917 0.917 - - - - - phosphatidylinositol 4-kinase type 2 alpha [Source:MGI Symbol;Acc:MGI:1934031]
23. 1500012F01Rik 1500012F01Rik 1469 0.916 0.916 - - - - -
24. Slc35b4 ENSMUSG00000018999 1928 0.915 0.915 - - - - - solute carrier family 35, member B4 [Source:MGI Symbol;Acc:MGI:1931249]
25. Inpp4a ENSMUSG00000026113 738 0.915 0.915 - - - - - inositol polyphosphate-4-phosphatase, type I [Source:MGI Symbol;Acc:MGI:1931123]
26. Herc1 ENSMUSG00000038664 1693 0.915 0.915 - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 [Source:MGI Symbol;Acc:MGI:2384589]
27. Samd14 ENSMUSG00000047181 851 0.915 0.915 - - - - - sterile alpha motif domain containing 14 [Source:MGI Symbol;Acc:MGI:2384945]
28. Abt1 ENSMUSG00000036376 497 0.914 0.914 - - - - - activator of basal transcription 1 [Source:MGI Symbol;Acc:MGI:1353636]
29. Tmem186 ENSMUSG00000043140 711 0.914 0.914 - - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
30. Spred2 ENSMUSG00000045671 4184 0.914 0.914 - - - - - sprouty-related, EVH1 domain containing 2 [Source:MGI Symbol;Acc:MGI:2150019]
31. Slc37a2 ENSMUSG00000032122 238 0.914 0.914 - - - - - solute carrier family 37 (glycerol-3-phosphate transporter), member 2 [Source:MGI Symbol;Acc:MGI:1929693]
32. Casp12 ENSMUSG00000025887 262 0.914 0.914 - - - - - caspase 12 [Source:MGI Symbol;Acc:MGI:1312922]
33. Fcer1g ENSMUSG00000058715 674 0.914 0.914 - - - - - Fc receptor, IgE, high affinity I, gamma polypeptide [Source:MGI Symbol;Acc:MGI:95496]
34. C230029F24Rik ENSMUSG00000051616 132 0.913 0.913 - - - - - RIKEN cDNA C230029F24 gene [Source:MGI Symbol;Acc:MGI:3045370]
35. Wscd2 ENSMUSG00000063430 434 0.913 0.913 - - - - - WSC domain containing 2 [Source:MGI Symbol;Acc:MGI:2445030]
36. Phactr3 ENSMUSG00000027525 233 0.913 0.913 - - - - - phosphatase and actin regulator 3 [Source:MGI Symbol;Acc:MGI:1921439]
37. Zfp768 ENSMUSG00000047371 458 0.913 0.913 - - - - - zinc finger protein 768 [Source:MGI Symbol;Acc:MGI:2384582]
38. Lsm7 ENSMUSG00000035215 305 0.913 0.913 - - - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1913344]
39. D8Ertd82e 1452 0.913 0.913 - - - - - DNA segment, Chr 8, ERATO Doi 82, expressed, transcript variant X1
40. Adam4 ENSMUSG00000072972 134 0.913 0.913 - - - - - a disintegrin and metallopeptidase domain 4 [Source:MGI Symbol;Acc:MGI:104731]
41. D030068K23Rik ENSMUSG00000097393 202 0.912 0.912 - - - - - RIKEN cDNA D030068K23 gene [Source:MGI Symbol;Acc:MGI:3037424]
42. Psmd9 ENSMUSG00000029440 901 0.912 0.912 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 [Source:MGI Symbol;Acc:MGI:1914401]
43. Pex2 ENSMUSG00000040374 1030 0.912 0.912 - - - - - peroxisomal biogenesis factor 2 [Source:MGI Symbol;Acc:MGI:107486]
44. Zfp949 ENSMUSG00000032425 816 0.912 0.912 - - - - - zinc finger protein 949 [Source:MGI Symbol;Acc:MGI:1918890]
45. Crlf2 ENSMUSG00000033467 305 0.912 0.912 - - - - - cytokine receptor-like factor 2 [Source:MGI Symbol;Acc:MGI:1889506]
46. Rcan2 ENSMUSG00000039601 286 0.912 0.912 - - - - - regulator of calcineurin 2 [Source:MGI Symbol;Acc:MGI:1858219]
47. Hspb6 ENSMUSG00000036854 399 0.912 0.912 - - - - - heat shock protein, alpha-crystallin-related, B6 [Source:MGI Symbol;Acc:MGI:2685325]
48. Zbtb6 ENSMUSG00000066798 698 0.912 0.912 - - - - - zinc finger and BTB domain containing 6 [Source:MGI Symbol;Acc:MGI:2442998]
49. Pgs1 ENSMUSG00000017715 1199 0.911 0.911 - - - - - phosphatidylglycerophosphate synthase 1 [Source:MGI Symbol;Acc:MGI:1921701]
50. Tfcp2 ENSMUSG00000009733 852 0.911 0.911 - - - - - transcription factor CP2 [Source:MGI Symbol;Acc:MGI:98509]
51. Ppp1r11 ENSMUSG00000036398 2733 0.911 0.911 - - - - - protein phosphatase 1, regulatory inhibitor subunit 11 [Source:MGI Symbol;Acc:MGI:1923747]
52. Pus7 ENSMUSG00000057541 1052 0.911 0.911 - - - - - pseudouridylate synthase 7 [Source:MGI Symbol;Acc:MGI:1925947]
53. Crls1 ENSMUSG00000027357 1105 0.911 0.911 - - - - - cardiolipin synthase 1 [Source:MGI Symbol;Acc:MGI:1913836]
54. Slx4ip ENSMUSG00000027281 722 0.911 0.911 - - - - - SLX4 interacting protein [Source:MGI Symbol;Acc:MGI:1921493]
55. 4930453N24Rik ENSMUSG00000059920 2738 0.91 0.910 - - - - - RIKEN cDNA 4930453N24 gene [Source:MGI Symbol;Acc:MGI:1914859]
56. 2500004C02Rik ENSMUSG00000073236 883 0.91 0.910 - - - - - RIKEN cDNA 2500004C02 gene [Source:MGI Symbol;Acc:MGI:1919576]
57. Tbcc ENSMUSG00000036430 1347 0.91 0.910 - - - - - tubulin-specific chaperone C [Source:MGI Symbol;Acc:MGI:1919976]
58. Tbc1d24 ENSMUSG00000036473 982 0.91 0.910 - - - - - TBC1 domain family, member 24 [Source:MGI Symbol;Acc:MGI:2443456]
59. Noc2l ENSMUSG00000095567 594 0.91 0.910 - - - - - NOC2 like nucleolar associated transcriptional repressor [Source:MGI Symbol;Acc:MGI:1931051]
60. Glt8d1 ENSMUSG00000021916 1457 0.91 0.910 - - - - - glycosyltransferase 8 domain containing 1 [Source:MGI Symbol;Acc:MGI:1923735]
61. Rnf8 ENSMUSG00000090083 2854 0.909 0.909 - - - - - ring finger protein 8 [Source:MGI Symbol;Acc:MGI:1929069]
62. Zfp523 ENSMUSG00000024220 1001 0.909 0.909 - - - - - zinc finger protein 523 [Source:MGI Symbol;Acc:MGI:2687278]
63. Map1a ENSMUSG00000027254 1223 0.909 0.909 - - - - - microtubule-associated protein 1 A [Source:MGI Symbol;Acc:MGI:1306776]
64. A530054K11Rik A530054K11Rik 529 0.909 0.909 - - - - -
65. Fam120b ENSMUSG00000014763 1419 0.908 0.908 - - - - - family with sequence similarity 120, member B [Source:MGI Symbol;Acc:MGI:1914794]
66. Ptprn2 ENSMUSG00000056553 489 0.908 0.908 - - - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:MGI Symbol;Acc:MGI:107418]
67. Pld3 ENSMUSG00000003363 1255 0.908 0.908 - - - - - phospholipase D family, member 3 [Source:MGI Symbol;Acc:MGI:1333782]
68. Card10 ENSMUSG00000033170 832 0.908 0.908 - - - - - caspase recruitment domain family, member 10 [Source:MGI Symbol;Acc:MGI:2146012]
69. Relb ENSMUSG00000002983 1128 0.908 0.908 - - - - - avian reticuloendotheliosis viral (v-rel) oncogene related B [Source:MGI Symbol;Acc:MGI:103289]
70. Timm10b ENSMUSG00000089847 1542 0.908 0.908 - - - - - translocase of inner mitochondrial membrane 10B [Source:MGI Symbol;Acc:MGI:1315196]
71. Ppp1r18 ENSMUSG00000034595 2092 0.907 0.907 - - - - - protein phosphatase 1, regulatory subunit 18 [Source:MGI Symbol;Acc:MGI:1923698]
72. Mt1 ENSMUSG00000031765 1970 0.907 0.907 - - - - - metallothionein 1 [Source:MGI Symbol;Acc:MGI:97171]
73. Lhfpl2 ENSMUSG00000045312 1417 0.907 0.907 - - - - - lipoma HMGIC fusion partner-like 2 [Source:MGI Symbol;Acc:MGI:2145236]
74. Gpr137b ENSMUSG00000021306 1100 0.907 0.907 - - - - - G protein-coupled receptor 137B [Source:MGI Symbol;Acc:MGI:1891463]
75. Bora ENSMUSG00000022070 1857 0.907 0.907 - - - - - bora, aurora kinase A activator [Source:MGI Symbol;Acc:MGI:1924994]
76. Cr1l ENSMUSG00000016481 1147 0.906 0.906 - - - - - complement component (3b/4b) receptor 1-like [Source:MGI Symbol;Acc:MGI:88513]
77. Nfkbia ENSMUSG00000021025 1709 0.906 0.906 - - - - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha [Source:MGI Symbol;Acc:MGI:104741]
78. Fam173a ENSMUSG00000057411 1184 0.905 0.905 - - - - - family with sequence similarity 173, member A [Source:MGI Symbol;Acc:MGI:2384888]
79. H2afz ENSMUSG00000037894 1997 0.905 0.905 - - - - - H2A histone family, member Z [Source:MGI Symbol;Acc:MGI:1888388]
80. Arhgef12 ENSMUSG00000059495 1383 0.904 0.904 - - - - - Rho guanine nucleotide exchange factor (GEF) 12 [Source:MGI Symbol;Acc:MGI:1916882]
81. Abl2 ENSMUSG00000026596 2059 0.904 0.904 - - - - - v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) [Source:MGI Symbol;Acc:MGI:87860]
82. Timm10 ENSMUSG00000027076 1934 0.904 0.904 - - - - - translocase of inner mitochondrial membrane 10 [Source:MGI Symbol;Acc:MGI:1353429]
83. Dirc2 ENSMUSG00000022848 856 0.903 0.903 - - - - - disrupted in renal carcinoma 2 (human) [Source:MGI Symbol;Acc:MGI:2387188]
84. Hdac3 ENSMUSG00000024454 1491 0.902 0.902 - - - - - histone deacetylase 3 [Source:MGI Symbol;Acc:MGI:1343091]
85. Lpgat1 ENSMUSG00000026623 3551 0.902 0.902 - - - - - lysophosphatidylglycerol acyltransferase 1 [Source:MGI Symbol;Acc:MGI:2446186]
86. Gm1673 ENSMUSG00000070858 2674 0.901 0.901 - - - - - predicted gene 1673 [Source:MGI Symbol;Acc:MGI:2686519]
87. Tmem214 ENSMUSG00000038828 4592 0.901 0.901 - - - - - transmembrane protein 214 [Source:MGI Symbol;Acc:MGI:1916046]
88. Cdk7 ENSMUSG00000069089 2829 0.901 0.901 - - - - - cyclin-dependent kinase 7 [Source:MGI Symbol;Acc:MGI:102956]
89. Sacs ENSMUSG00000048279 980 0.9 0.900 - - - - - sacsin [Source:MGI Symbol;Acc:MGI:1354724]
90. Mrps27 ENSMUSG00000041632 3124 0.9 0.900 - - - - - mitochondrial ribosomal protein S27 [Source:MGI Symbol;Acc:MGI:1919064]
91. Tpm2 ENSMUSG00000028464 1803 0.9 0.900 - - - - - tropomyosin 2, beta [Source:MGI Symbol;Acc:MGI:98810]
92. Creb3l1 ENSMUSG00000027230 1172 0.9 0.900 - - - - - cAMP responsive element binding protein 3-like 1 [Source:MGI Symbol;Acc:MGI:1347062]
93. Fam117a ENSMUSG00000038893 1746 0.899 0.899 - - - - - family with sequence similarity 117, member A [Source:MGI Symbol;Acc:MGI:2144564]
94. Klhl25 ENSMUSG00000055652 725 0.899 0.899 - - - - - kelch-like 25 [Source:MGI Symbol;Acc:MGI:2668031]
95. Pik3c2a ENSMUSG00000030660 2527 0.899 0.899 - - - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha [Source:MGI Symbol;Acc:MGI:1203729]
96. Clic4 ENSMUSG00000037242 4931 0.898 0.898 - - - - - chloride intracellular channel 4 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1352754]
97. Smap2 ENSMUSG00000032870 1629 0.898 0.898 - - - - - small ArfGAP 2 [Source:MGI Symbol;Acc:MGI:1917030]
98. 0610011F06Rik 1655 0.898 0.898 - - - - - RIKEN cDNA 0610011F06 gene
99. 2610507B11Rik ENSMUSG00000010277 2317 0.896 0.896 - - - - - RIKEN cDNA 2610507B11 gene [Source:MGI Symbol;Acc:MGI:1919753]
100. Nxf1 ENSMUSG00000010097 3951 0.895 0.895 - - - - - nuclear RNA export factor 1 [Source:MGI Symbol;Acc:MGI:1858330]

There are 328 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA