Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lig3

Gene Name Gene ID Reads Annotation
Lig3 ENSMUSG00000020697 1227 ligase III, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:109152]







Genes with expression patterns similar to Lig3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lig3 ENSMUSG00000020697 1227 6 1.000 1.000 1.000 1.000 1.000 1.000 ligase III, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:109152]
2. Tmem243 ENSMUSG00000079659 181 1.723 - 0.823 - - 0.900 - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
3. Zswim1 ENSMUSG00000017764 460 1.691 - 0.819 - - 0.872 - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
4. Pigs ENSMUSG00000041958 765 1.686 - 0.805 - - 0.881 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:MGI Symbol;Acc:MGI:2687325]
5. Mrps26 ENSMUSG00000037740 1834 1.684 - 0.869 - - 0.815 - mitochondrial ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1333830]
6. Evi5l ENSMUSG00000011832 691 1.653 - 0.798 - - 0.855 - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
7. Sugp2 ENSMUSG00000036054 1239 1.627 - 0.779 - - 0.848 - SURP and G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:2678085]
8. Foxm1 ENSMUSG00000001517 1628 1.613 - 0.753 - - 0.860 - forkhead box M1 [Source:MGI Symbol;Acc:MGI:1347487]
9. Gfer ENSMUSG00000040888 1546 1.607 - 0.716 - - 0.891 - growth factor, augmenter of liver regeneration [Source:MGI Symbol;Acc:MGI:107757]
10. Wdr76 ENSMUSG00000027242 1591 1.606 - 0.735 - - 0.871 - WD repeat domain 76 [Source:MGI Symbol;Acc:MGI:1926186]
11. Snapc3 ENSMUSG00000028483 2319 1.603 - 0.797 - - 0.806 - small nuclear RNA activating complex, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1916338]
12. Chka ENSMUSG00000024843 2599 1.602 - 0.777 - - 0.825 - choline kinase alpha [Source:MGI Symbol;Acc:MGI:107760]
13. Mns1 ENSMUSG00000032221 1295 1.578 - 0.762 - - 0.816 - meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933]
14. Upf1 ENSMUSG00000058301 1982 1.577 - 0.739 - - 0.838 - UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
15. Hoxb5 ENSMUSG00000038700 2439 1.533 - 0.763 - - 0.770 - homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
16. Edf1 ENSMUSG00000015092 1918 1.526 - 0.718 - - 0.808 - endothelial differentiation-related factor 1 [Source:MGI Symbol;Acc:MGI:1891227]
17. D930016D06Rik ENSMUSG00000097392 1429 1.506 - 0.738 - - 0.768 - RIKEN cDNA D930016D06 gene [Source:MGI Symbol;Acc:MGI:2442700]
18. Usp31 ENSMUSG00000063317 2365 1.499 - 0.752 - - 0.747 - ubiquitin specific peptidase 31 [Source:MGI Symbol;Acc:MGI:1923429]
19. Eif3h ENSMUSG00000022312 7829 1.474 - 0.746 - - 0.728 - eukaryotic translation initiation factor 3, subunit H [Source:MGI Symbol;Acc:MGI:1915385]
20. Cxcl5 ENSMUSG00000029371 85 0.938 - - - - 0.938 - chemokine (C-X-C motif) ligand 5 [Source:MGI Symbol;Acc:MGI:1096868]
21. B3galt1 ENSMUSG00000034780 267 0.93 - - - - 0.930 - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1349403]
22. C2cd3 ENSMUSG00000047248 1181 0.928 - 0.928 - - - - C2 calcium-dependent domain containing 3 [Source:MGI Symbol;Acc:MGI:2142166]
23. Fgf5 ENSMUSG00000029337 249 0.928 - - - - 0.928 - fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
24. Gm9531 ENSMUSG00000079225 629 0.919 - - - - 0.919 - predicted gene 9531 [Source:MGI Symbol;Acc:MGI:3779940]
25. Nr4a2 ENSMUSG00000026826 594 0.918 - 0.918 - - - - nuclear receptor subfamily 4, group A, member 2 [Source:MGI Symbol;Acc:MGI:1352456]
26. Srbd1 ENSMUSG00000024135 926 0.915 - - - - 0.915 - S1 RNA binding domain 1 [Source:MGI Symbol;Acc:MGI:1925836]
27. Ubap2 ENSMUSG00000028433 5289 0.911 - - - - 0.911 - ubiquitin-associated protein 2 [Source:MGI Symbol;Acc:MGI:1916176]
28. Synrg ENSMUSG00000034940 1295 0.911 - - - - 0.911 - synergin, gamma [Source:MGI Symbol;Acc:MGI:1354742]
29. Zfp408 ENSMUSG00000075040 534 0.907 - - - - 0.907 - zinc finger protein 408 [Source:MGI Symbol;Acc:MGI:2685857]
30. Abcg4 ENSMUSG00000032131 186 0.904 - - - - 0.904 - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
31. B130046B21Rik ENSMUSG00000097414 59 0.901 - - - - 0.901 - RIKEN cDNA B130046B21 gene [Source:MGI Symbol;Acc:MGI:3704458]
32. Gm13775 ENSMUSG00000081207 54 0.901 - - - - 0.901 - predicted gene 13775 [Source:MGI Symbol;Acc:MGI:3712466]
33. Gm17414 Gm17414 131 0.901 - - - - 0.901 -
34. Gm11975 ENSMUSG00000084231 70 0.901 - - - - 0.901 - predicted gene 11975 [Source:MGI Symbol;Acc:MGI:3650057]
35. Il18bp ENSMUSG00000070427 230 0.901 - - - - 0.901 - interleukin 18 binding protein [Source:MGI Symbol;Acc:MGI:1333800]
36. Skint8 ENSMUSG00000078599 109 0.9 - - - - 0.900 - selection and upkeep of intraepithelial T cells 8 [Source:MGI Symbol;Acc:MGI:3651523]
37. Gstt1 ENSMUSG00000001663 158 0.9 - - - - 0.900 - glutathione S-transferase, theta 1 [Source:MGI Symbol;Acc:MGI:107379]
38. Gm8757 ENSMUSG00000084125 112 0.9 - - - - 0.900 - predicted gene 8757 [Source:MGI Symbol;Acc:MGI:3644342]
39. Coil ENSMUSG00000033983 461 0.9 - - - - 0.900 - coilin [Source:MGI Symbol;Acc:MGI:104842]
40. D030055H07Rik ENSMUSG00000086296 161 0.9 - - - - 0.900 - RIKEN cDNA D030055H07 gene [Source:MGI Symbol;Acc:MGI:3605036]
41. Slc25a53 ENSMUSG00000044348 516 0.9 - - - - 0.900 - solute carrier family 25, member 53 [Source:MGI Symbol;Acc:MGI:1914312]
42. Phkg1 ENSMUSG00000025537 65 0.899 - - - - 0.899 - phosphorylase kinase gamma 1 [Source:MGI Symbol;Acc:MGI:97579]
43. Mzf1 ENSMUSG00000030380 234 0.899 - - - - 0.899 - myeloid zinc finger 1 [Source:MGI Symbol;Acc:MGI:107457]
44. Dennd4c ENSMUSG00000038024 349 0.898 - - - - 0.898 - DENN/MADD domain containing 4C [Source:MGI Symbol;Acc:MGI:1914769]
45. Fbxl19 ENSMUSG00000030811 233 0.898 - - - - 0.898 - F-box and leucine-rich repeat protein 19 [Source:MGI Symbol;Acc:MGI:3039600]
46. C030037D09Rik ENSMUSG00000087574 291 0.897 - - - - 0.897 - RIKEN cDNA C030037D09 gene [Source:MGI Symbol;Acc:MGI:1924865]
47. Simc1 ENSMUSG00000043183 1054 0.897 - - - - 0.897 - SUMO-interacting motifs containing 1 [Source:MGI Symbol;Acc:MGI:2442599]
48. Parp3 ENSMUSG00000023249 110 0.897 - - - - 0.897 - poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]
49. Tpm3-rs7 ENSMUSG00000058126 1977 0.895 - - - - 0.895 - tropomyosin 3, related sequence 7 [Source:MGI Symbol;Acc:MGI:99705]
50. Mark4 ENSMUSG00000030397 335 0.894 - - - - 0.894 - MAP/microtubule affinity regulating kinase 4 [Source:MGI Symbol;Acc:MGI:1920955]
51. Zfp354a ENSMUSG00000020364 242 0.894 - - - - 0.894 - zinc finger protein 354A [Source:MGI Symbol;Acc:MGI:103172]
52. Atad2b ENSMUSG00000052812 434 0.894 - - - - 0.894 - ATPase family, AAA domain containing 2B [Source:MGI Symbol;Acc:MGI:2444798]
53. Nin ENSMUSG00000021068 2735 0.893 - - - - 0.893 - ninein [Source:MGI Symbol;Acc:MGI:105108]
54. Bai3 Bai3 552 0.893 - - - - 0.893 -
55. Ankrd42 ENSMUSG00000041343 120 0.892 - - - - 0.892 - ankyrin repeat domain 42 [Source:MGI Symbol;Acc:MGI:1921095]
56. Rpl35a ENSMUSG00000060636 411 0.892 - - - - 0.892 - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
57. U2surp ENSMUSG00000032407 7845 0.892 - - - - 0.892 - U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208]
58. Nup54 ENSMUSG00000034826 1026 0.891 - - - - 0.891 - nucleoporin 54 [Source:MGI Symbol;Acc:MGI:1920460]
59. Gm5117 ENSMUSG00000093862 197 0.891 - - - - 0.891 - predicted gene 5117 [Source:MGI Symbol;Acc:MGI:3648041]
60. Dclre1a ENSMUSG00000025077 675 0.89 - - - - 0.890 - DNA cross-link repair 1A [Source:MGI Symbol;Acc:MGI:1930042]
61. Rassf7 ENSMUSG00000038618 391 0.89 - - - - 0.890 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 [Source:MGI Symbol;Acc:MGI:1914235]
62. Rabggta ENSMUSG00000040472 395 0.889 - - - - 0.889 - Rab geranylgeranyl transferase, a subunit [Source:MGI Symbol;Acc:MGI:1860443]
63. Gm9864 ENSMUSG00000052005 829 0.889 - - - - 0.889 - predicted gene 9864 [Source:MGI Symbol;Acc:MGI:3708663]
64. Spop ENSMUSG00000057522 1819 0.888 - 0.888 - - - - speckle-type POZ protein [Source:MGI Symbol;Acc:MGI:1343085]
65. Chrna4 ENSMUSG00000027577 941 0.888 - - - - 0.888 - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
66. Ppib ENSMUSG00000032383 722 0.887 - - - - 0.887 - peptidylprolyl isomerase B [Source:MGI Symbol;Acc:MGI:97750]
67. Klf4 ENSMUSG00000003032 309 0.887 - - - - 0.887 - Kruppel-like factor 4 (gut) [Source:MGI Symbol;Acc:MGI:1342287]
68. Gm22906 ENSMUSG00000092932 830 0.886 - - - - 0.886 - predicted gene, 22906 [Source:MGI Symbol;Acc:MGI:5452683]
69. Adamts15 ENSMUSG00000033453 215 0.885 - - - - 0.885 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15 [Source:MGI Symbol;Acc:MGI:2449569]
70. Fgf13 ENSMUSG00000031137 365 0.885 - - - - 0.885 - fibroblast growth factor 13 [Source:MGI Symbol;Acc:MGI:109178]
71. Gm6807 ENSMUSG00000057605 479 0.884 - - - - 0.884 - predicted gene 6807 [Source:MGI Symbol;Acc:MGI:3649145]
72. Tpmt ENSMUSG00000021376 544 0.884 - - - - 0.884 - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
73. Cflar ENSMUSG00000026031 1594 0.884 - 0.884 - - - - CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
74. 4933431E20Rik ENSMUSG00000086968 381 0.883 - - - - 0.883 - RIKEN cDNA 4933431E20 gene [Source:MGI Symbol;Acc:MGI:3584041]
75. Frg1 ENSMUSG00000031590 1255 0.883 - - - - 0.883 - FSHD region gene 1 [Source:MGI Symbol;Acc:MGI:893597]
76. Tbx5 ENSMUSG00000018263 655 0.882 - 0.882 - - - - T-box 5 [Source:MGI Symbol;Acc:MGI:102541]
77. Hoxb1 ENSMUSG00000018973 357 0.881 - - - - 0.881 - homeobox B1 [Source:MGI Symbol;Acc:MGI:96182]
78. Ppm1e ENSMUSG00000046442 270 0.88 - - - - 0.880 - protein phosphatase 1E (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:2444096]
79. Nup93 ENSMUSG00000032939 4440 0.879 - - - - 0.879 - nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055]
80. Wdr34 ENSMUSG00000039715 422 0.879 - - - - 0.879 - WD repeat domain 34 [Source:MGI Symbol;Acc:MGI:1919070]
81. Bfar ENSMUSG00000022684 1500 0.879 - - - - 0.879 - bifunctional apoptosis regulator [Source:MGI Symbol;Acc:MGI:1914368]
82. Wdfy1 ENSMUSG00000073643 3020 0.879 - 0.879 - - - - WD repeat and FYVE domain containing 1 [Source:MGI Symbol;Acc:MGI:1916618]
83. Ercc6l2 ENSMUSG00000021470 1300 0.879 - 0.879 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 [Source:MGI Symbol;Acc:MGI:1923501]
84. Rpf2 ENSMUSG00000038510 1530 0.878 - - - - 0.878 - ribosome production factor 2 homolog [Source:MGI Symbol;Acc:MGI:1914489]
85. Slc25a14 ENSMUSG00000031105 506 0.878 - - - - 0.878 - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:MGI Symbol;Acc:MGI:1330823]
86. Nudt11 ENSMUSG00000073295 757 0.878 - - - - 0.878 - nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
87. S100pbp ENSMUSG00000040928 2481 0.877 - 0.877 - - - - S100P binding protein [Source:MGI Symbol;Acc:MGI:1921898]
88. Klhl12 ENSMUSG00000026455 1454 0.877 - - - - 0.877 - kelch-like 12 [Source:MGI Symbol;Acc:MGI:2385619]
89. Bcs1l ENSMUSG00000026172 2289 0.877 - - - - 0.877 - BCS1-like (yeast) [Source:MGI Symbol;Acc:MGI:1914071]
90. Robo3 ENSMUSG00000032128 389 0.877 - - - - 0.877 - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
91. Galc ENSMUSG00000021003 662 0.876 - 0.876 - - - - galactosylceramidase [Source:MGI Symbol;Acc:MGI:95636]
92. Rpl21-ps14 ENSMUSG00000062152 770 0.876 - - - - 0.876 - ribosomal protein L21, pseudogene 14 [Source:MGI Symbol;Acc:MGI:3648110]
93. Arrb2 ENSMUSG00000060216 1401 0.876 - - - - 0.876 - arrestin, beta 2 [Source:MGI Symbol;Acc:MGI:99474]
94. Slitrk2 ENSMUSG00000036790 364 0.876 - - - - 0.876 - SLIT and NTRK-like family, member 2 [Source:MGI Symbol;Acc:MGI:2679449]
95. Eci1 ENSMUSG00000024132 1403 0.876 - 0.876 - - - - enoyl-Coenzyme A delta isomerase 1 [Source:MGI Symbol;Acc:MGI:94871]
96. Bace1 ENSMUSG00000032086 1360 0.875 - 0.875 - - - - beta-site APP cleaving enzyme 1 [Source:MGI Symbol;Acc:MGI:1346542]
97. Nup98 ENSMUSG00000063550 482 0.875 - - - - 0.875 - nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]
98. Bcap29 ENSMUSG00000020650 559 0.875 - - - - 0.875 - B cell receptor associated protein 29 [Source:MGI Symbol;Acc:MGI:101917]
99. Krit1 ENSMUSG00000000600 1627 0.874 - - - - 0.874 - KRIT1, ankyrin repeat containing [Source:MGI Symbol;Acc:MGI:1930618]
100. Gm10110 ENSMUSG00000062093 706 0.874 - 0.874 - - - - predicted gene 10110 [Source:MGI Symbol;Acc:MGI:3641718]

There are 523 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA