Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Farp1

Gene Name Gene ID Reads Annotation
Farp1 ENSMUSG00000025555 3653 FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:MGI Symbol;Acc:MGI:2446173]







Genes with expression patterns similar to Farp1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Farp1 ENSMUSG00000025555 3653 6 1.000 1.000 1.000 1.000 1.000 1.000 FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:MGI Symbol;Acc:MGI:2446173]
2. Tanc1 ENSMUSG00000035168 4099 1.481 - - - - 0.700 0.781 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:MGI Symbol;Acc:MGI:1914110]
3. Ppargc1b ENSMUSG00000033871 120 0.821 - - - - 0.821 - peroxisome proliferative activated receptor, gamma, coactivator 1 beta [Source:MGI Symbol;Acc:MGI:2444934]
4. Btn1a1 ENSMUSG00000000706 24 0.819 - - - - 0.819 - butyrophilin, subfamily 1, member A1 [Source:MGI Symbol;Acc:MGI:103118]
5. Stmnd1 ENSMUSG00000063529 14 0.815 - - - - 0.815 - stathmin domain containing 1 [Source:MGI Symbol;Acc:MGI:2686420]
6. 1600014C23Rik ENSMUSG00000094690 35 0.814 - - - - 0.814 - RIKEN cDNA 1600014C23 gene [Source:MGI Symbol;Acc:MGI:1919490]
7. Gast ENSMUSG00000017165 13 0.814 - - - - 0.814 - gastrin [Source:MGI Symbol;Acc:MGI:104768]
8. Gm22791 ENSMUSG00000087857 19 0.812 - - - - 0.812 - predicted gene, 22791 [Source:MGI Symbol;Acc:MGI:5452568]
9. Gm16712 ENSMUSG00000097077 14 0.812 - - - - 0.812 - predicted gene, 16712 [Source:MGI Symbol;Acc:MGI:4439636]
10. Ltk ENSMUSG00000027297 12 0.812 - - - - 0.812 - leukocyte tyrosine kinase [Source:MGI Symbol;Acc:MGI:96840]
11. A730090N16Rik ENSMUSG00000090120 19 0.812 - - - - 0.812 - RIKEN cDNA A730090N16 gene [Source:MGI Symbol;Acc:MGI:2442748]
12. Sytl1 ENSMUSG00000028860 26 0.811 - - - - 0.811 - synaptotagmin-like 1 [Source:MGI Symbol;Acc:MGI:1933365]
13. Sep-04 Sep-04 178 0.81 - - - - 0.810 -
14. Epyc ENSMUSG00000019936 32 0.809 - - - - 0.809 - epiphycan [Source:MGI Symbol;Acc:MGI:107942]
15. P2rx6 ENSMUSG00000022758 13 0.809 - - - - 0.809 - purinergic receptor P2X, ligand-gated ion channel, 6 [Source:MGI Symbol;Acc:MGI:1337113]
16. Gm26807 ENSMUSG00000097484 14 0.808 - - - - 0.808 - predicted gene, 26807 [Source:MGI Symbol;Acc:MGI:5477301]
17. Gm26606 ENSMUSG00000097337 23 0.806 - - - - 0.806 - predicted gene, 26606 [Source:MGI Symbol;Acc:MGI:5477100]
18. Lyst ENSMUSG00000019726 99 0.804 - - - - 0.804 - lysosomal trafficking regulator [Source:MGI Symbol;Acc:MGI:107448]
19. Ttll13 ENSMUSG00000045467 27 0.804 - - - - 0.804 - tubulin tyrosine ligase-like family, member 13 [Source:MGI Symbol;Acc:MGI:1920845]
20. Gm14391 ENSMUSG00000078903 51 0.804 - - - - 0.804 - predicted gene 14391 [Source:MGI Symbol;Acc:MGI:3709324]
21. 4933438K21Rik ENSMUSG00000093617 64 0.799 - - - - 0.799 - RIKEN cDNA 4933438K21 gene [Source:MGI Symbol;Acc:MGI:1918520]
22. Cr2 ENSMUSG00000026616 16 0.799 - - - - 0.799 - complement receptor 2 [Source:MGI Symbol;Acc:MGI:88489]
23. Gm20448 Gm20448 48 0.799 - - - - 0.799 -
24. Fam13b ENSMUSG00000036501 75 0.796 - - - - 0.796 - family with sequence similarity 13, member B [Source:MGI Symbol;Acc:MGI:2447834]
25. Ier5l ENSMUSG00000089762 201 0.795 - - - - 0.795 - immediate early response 5-like [Source:MGI Symbol;Acc:MGI:1919750]
26. Vsnl1 ENSMUSG00000054459 52 0.793 - - - - 0.793 - visinin-like 1 [Source:MGI Symbol;Acc:MGI:1349453]
27. Rxfp2 ENSMUSG00000053368 56 0.792 - - - - 0.792 - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
28. Shf ENSMUSG00000033256 192 0.792 - - - - 0.792 - Src homology 2 domain containing F [Source:MGI Symbol;Acc:MGI:3613669]
29. Lmod1 ENSMUSG00000048096 44 0.79 - - - - 0.790 - leiomodin 1 (smooth muscle) [Source:MGI Symbol;Acc:MGI:2135671]
30. Glcci1 ENSMUSG00000029638 55 0.788 - - - - 0.788 - glucocorticoid induced transcript 1 [Source:MGI Symbol;Acc:MGI:2179717]
31. Gm25304 Gm25304 44 0.787 - - - - 0.787 -
32. Mall ENSMUSG00000027377 52 0.784 - - - - 0.784 - mal, T cell differentiation protein-like [Source:MGI Symbol;Acc:MGI:2385152]
33. Aox1 ENSMUSG00000063558 17 0.784 - - - - 0.784 - aldehyde oxidase 1 [Source:MGI Symbol;Acc:MGI:88035]
34. Atp10a ENSMUSG00000025324 152 0.781 - - - - 0.781 - ATPase, class V, type 10A [Source:MGI Symbol;Acc:MGI:1330809]
35. Spt1 Spt1 55 0.781 - - - - 0.781 -
36. Pvrl2 Pvrl2 3155 0.778 - 0.778 - - - -
37. Pcdhb3 ENSMUSG00000045498 48 0.775 - - - - 0.775 - protocadherin beta 3 [Source:MGI Symbol;Acc:MGI:2136737]
38. Sft2d2 ENSMUSG00000040848 1850 0.775 - 0.775 - - - - SFT2 domain containing 2 [Source:MGI Symbol;Acc:MGI:1917362]
39. Tmem43 ENSMUSG00000030095 948 0.773 - - - - 0.773 - transmembrane protein 43 [Source:MGI Symbol;Acc:MGI:1921372]
40. Trim11 ENSMUSG00000020455 522 0.772 - - - - 0.772 - tripartite motif-containing 11 [Source:MGI Symbol;Acc:MGI:2137355]
41. Gm15843 ENSMUSG00000085812 90 0.769 - - - - 0.769 - predicted gene 15843 [Source:MGI Symbol;Acc:MGI:3801845]
42. Casp8ap2 ENSMUSG00000028282 2728 0.768 - 0.768 - - - - caspase 8 associated protein 2 [Source:MGI Symbol;Acc:MGI:1349399]
43. Poldip3 ENSMUSG00000041815 3594 0.768 - 0.768 - - - - polymerase (DNA-directed), delta interacting protein 3 [Source:MGI Symbol;Acc:MGI:1921076]
44. Slc22a3 ENSMUSG00000023828 78 0.768 - - - - 0.768 - solute carrier family 22 (organic cation transporter), member 3 [Source:MGI Symbol;Acc:MGI:1333817]
45. Noc2l ENSMUSG00000095567 594 0.768 - - - - 0.768 - NOC2 like nucleolar associated transcriptional repressor [Source:MGI Symbol;Acc:MGI:1931051]
46. Gm17541 ENSMUSG00000091732 261 0.766 - - - - 0.766 - predicted gene, 17541 [Source:MGI Symbol;Acc:MGI:4937175]
47. Mrps12 ENSMUSG00000045948 1578 0.766 - 0.766 - - - - mitochondrial ribosomal protein S12 [Source:MGI Symbol;Acc:MGI:1346333]
48. Gm23887 ENSMUSG00000084632 68 0.766 - - - - 0.766 - predicted gene, 23887 [Source:MGI Symbol;Acc:MGI:5453664]
49. Tubg2 ENSMUSG00000045007 44 0.765 - - - - 0.765 - tubulin, gamma 2 [Source:MGI Symbol;Acc:MGI:2144208]
50. Ppp1r36 ENSMUSG00000052221 97 0.765 - - - - 0.765 - protein phosphatase 1, regulatory subunit 36 [Source:MGI Symbol;Acc:MGI:2684916]
51. Apba1 ENSMUSG00000024897 107 0.764 - - - - 0.764 - amyloid beta (A4) precursor protein binding, family A, member 1 [Source:MGI Symbol;Acc:MGI:1860297]
52. Wsb2 ENSMUSG00000029364 343 0.763 - - - - 0.763 - WD repeat and SOCS box-containing 2 [Source:MGI Symbol;Acc:MGI:2144041]
53. Oxsm ENSMUSG00000021786 115 0.763 - - - - 0.763 - 3-oxoacyl-ACP synthase, mitochondrial [Source:MGI Symbol;Acc:MGI:1918397]
54. Relb ENSMUSG00000002983 1128 0.763 - - - - 0.763 - avian reticuloendotheliosis viral (v-rel) oncogene related B [Source:MGI Symbol;Acc:MGI:103289]
55. Trmt2a ENSMUSG00000022721, ENSMUSG00000098930 1641 0.762 - 0.762 - - - - TRM2 tRNA methyltransferase 2A [Source:MGI Symbol;Acc:MGI:96270]
56. Il16 ENSMUSG00000001741 60 0.761 - - - - 0.761 - interleukin 16 [Source:MGI Symbol;Acc:MGI:1270855]
57. Olfml2b ENSMUSG00000038463 477 0.76 - - - - 0.760 - olfactomedin-like 2B [Source:MGI Symbol;Acc:MGI:2443310]
58. Rnf10 ENSMUSG00000041740 4736 0.759 - 0.759 - - - - ring finger protein 10 [Source:MGI Symbol;Acc:MGI:1859162]
59. Dnm1 ENSMUSG00000026825 727 0.757 - - - - 0.757 - dynamin 1 [Source:MGI Symbol;Acc:MGI:107384]
60. Mrs2 ENSMUSG00000021339 104 0.756 - - - - 0.756 - MRS2 magnesium transporter [Source:MGI Symbol;Acc:MGI:2685748]
61. BC048403 ENSMUSG00000053684 84 0.755 - - - - 0.755 - cDNA sequence BC048403 [Source:MGI Symbol;Acc:MGI:2670984]
62. Anapc4 ENSMUSG00000029176 2907 0.754 - 0.754 - - - - anaphase promoting complex subunit 4 [Source:MGI Symbol;Acc:MGI:1098673]
63. Exog ENSMUSG00000042787 1392 0.754 - 0.754 - - - - endo/exonuclease (5'-3'), endonuclease G-like [Source:MGI Symbol;Acc:MGI:2143333]
64. Nav3 ENSMUSG00000020181 186 0.753 - - - - 0.753 - neuron navigator 3 [Source:MGI Symbol;Acc:MGI:2183703]
65. Phykpl ENSMUSG00000020359 114 0.752 - - - - 0.752 - 5-phosphohydroxy-L-lysine phospholyase [Source:MGI Symbol;Acc:MGI:1920197]
66. Sh3bp2 ENSMUSG00000054520 148 0.752 - - - - 0.752 - SH3-domain binding protein 2 [Source:MGI Symbol;Acc:MGI:1346349]
67. Ccdc78 ENSMUSG00000071202 90 0.752 - - - - 0.752 - coiled-coil domain containing 78 [Source:MGI Symbol;Acc:MGI:2685784]
68. B9d2 ENSMUSG00000063439 1774 0.75 - - - - 0.750 - B9 protein domain 2 [Source:MGI Symbol;Acc:MGI:2387643]
69. Setdb2 ENSMUSG00000071350 99 0.75 - - - - 0.750 - SET domain, bifurcated 2 [Source:MGI Symbol;Acc:MGI:2685139]
70. Cgnl1 ENSMUSG00000032232 2548 0.749 - 0.749 - - - - cingulin-like 1 [Source:MGI Symbol;Acc:MGI:1915428]
71. Mgmt ENSMUSG00000054612 134 0.748 - - - - 0.748 - O-6-methylguanine-DNA methyltransferase [Source:MGI Symbol;Acc:MGI:96977]
72. D930016D06Rik ENSMUSG00000097392 1429 0.748 - 0.748 - - - - RIKEN cDNA D930016D06 gene [Source:MGI Symbol;Acc:MGI:2442700]
73. Tgfbrap1 ENSMUSG00000070939 1413 0.747 - - - - 0.747 - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
74. Slc27a1 ENSMUSG00000031808 233 0.747 - - - - 0.747 - solute carrier family 27 (fatty acid transporter), member 1 [Source:MGI Symbol;Acc:MGI:1347098]
75. Zfp407 ENSMUSG00000048410 2356 0.747 - 0.747 - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
76. Hist1h4c ENSMUSG00000060678 136 0.746 - - - - 0.746 - histone cluster 1, H4c [Source:MGI Symbol;Acc:MGI:2448421]
77. Echs1 ENSMUSG00000025465 3845 0.745 - 0.745 - - - - enoyl Coenzyme A hydratase, short chain, 1, mitochondrial [Source:MGI Symbol;Acc:MGI:2136460]
78. Gm16459 ENSMUSG00000084022 255 0.745 - - - - 0.745 - predicted gene 16459 [Source:MGI Symbol;Acc:MGI:3644110]
79. Zbed3 ENSMUSG00000041995 2510 0.744 0.744 - - - - - zinc finger, BED type containing 3 [Source:MGI Symbol;Acc:MGI:1919364]
80. Sugp2 ENSMUSG00000036054 1239 0.744 - 0.744 - - - - SURP and G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:2678085]
81. Nupl1 ENSMUSG00000063895 198 0.744 - - - - 0.744 - nucleoporin like 1 [Source:MGI Symbol;Acc:MGI:1919094]
82. Aurkb ENSMUSG00000020897 2512 0.744 - 0.744 - - - - aurora kinase B [Source:MGI Symbol;Acc:MGI:107168]
83. Qser1 ENSMUSG00000074994 3293 0.743 - 0.743 - - - - glutamine and serine rich 1 [Source:MGI Symbol;Acc:MGI:2138986]
84. Zfp36l2 ENSMUSG00000045817 3284 0.742 - 0.742 - - - - zinc finger protein 36, C3H type-like 2 [Source:MGI Symbol;Acc:MGI:107945]
85. Gm8121 ENSMUSG00000051116 163 0.742 - - - - 0.742 - predicted pseudogene 8121 [Source:MGI Symbol;Acc:MGI:3645325]
86. Col5a1 ENSMUSG00000026837 6050 0.741 0.741 - - - - - collagen, type V, alpha 1 [Source:MGI Symbol;Acc:MGI:88457]
87. Gm6483 ENSMUSG00000087153 1875 0.741 - 0.741 - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
88. Cryzl1 ENSMUSG00000058240 2195 0.741 - 0.741 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
89. Dhx30 ENSMUSG00000032480 2314 0.738 - 0.738 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Source:MGI Symbol;Acc:MGI:1920081]
90. Ap1b1 ENSMUSG00000009090 1648 0.738 - 0.738 - - - - adaptor protein complex AP-1, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1096368]
91. Mex3d ENSMUSG00000048696 2206 0.737 - 0.737 - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
92. Galnt4 ENSMUSG00000090035 1189 0.736 - - - - 0.736 - polypeptide N-acetylgalactosaminyltransferase 4 [Source:MGI Symbol;Acc:MGI:894692]
93. Ednra ENSMUSG00000031616 1286 0.735 - 0.735 - - - - endothelin receptor type A [Source:MGI Symbol;Acc:MGI:105923]
94. Synj2bp ENSMUSG00000090935 3314 0.734 - 0.734 - - - - synaptojanin 2 binding protein [Source:MGI Symbol;Acc:MGI:1344347]
95. Eri3 ENSMUSG00000033423 3943 0.733 - 0.733 - - - - exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]
96. Armc1 ENSMUSG00000027599 6408 0.733 - 0.733 - - - - armadillo repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921502]
97. Sdhd ENSMUSG00000000171 609 0.733 - - - - 0.733 - succinate dehydrogenase complex, subunit D, integral membrane protein [Source:MGI Symbol;Acc:MGI:1914175]
98. Rell1 ENSMUSG00000047881 1229 0.731 - 0.731 - - - - RELT-like 1 [Source:MGI Symbol;Acc:MGI:2140767]
99. Sema3a ENSMUSG00000028883 2678 0.731 - - - - 0.731 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A [Source:MGI Symbol;Acc:MGI:107558]
100. Ddx50 ENSMUSG00000020076 3606 0.73 0.730 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 [Source:MGI Symbol;Acc:MGI:2182303]

There are 87 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA