Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Cpsf6

Gene Name Gene ID Reads Annotation
Cpsf6 ENSMUSG00000055531 12898 cleavage and polyadenylation specific factor 6 [Source:MGI Symbol;Acc:MGI:1913948]







Genes with expression patterns similar to Cpsf6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cpsf6 ENSMUSG00000055531 12898 6 1.000 1.000 1.000 1.000 1.000 1.000 cleavage and polyadenylation specific factor 6 [Source:MGI Symbol;Acc:MGI:1913948]
2. Celf1 ENSMUSG00000005506, ENSMUSG00000110883 6174 0.785 0.785 - - - - - CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
3. Cbx1 ENSMUSG00000018666 11754 0.776 0.776 - - - - - chromobox 1 [Source:MGI Symbol;Acc:MGI:105369]
4. Lsm14a ENSMUSG00000066568 12051 0.775 0.775 - - - - - LSM14A mRNA processing body assembly factor [Source:MGI Symbol;Acc:MGI:1914320]
5. Tmem245 ENSMUSG00000055296 11794 0.768 0.768 - - - - - transmembrane protein 245 [Source:MGI Symbol;Acc:MGI:2445107]
6. Matr3 ENSMUSG00000037236 11220 0.764 0.764 - - - - - matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
7. Sep-11 Sep-11 11717 0.762 0.762 - - - - -
8. Rps2 ENSMUSG00000044533 13115 0.755 0.755 - - - - - ribosomal protein S2 [Source:MGI Symbol;Acc:MGI:105110]
9. Eif3h ENSMUSG00000022312 7829 0.751 0.751 - - - - - eukaryotic translation initiation factor 3, subunit H [Source:MGI Symbol;Acc:MGI:1915385]
10. Cks1b ENSMUSG00000028044 21678 0.751 0.751 - - - - - CDC28 protein kinase 1b [Source:MGI Symbol;Acc:MGI:1889208]
11. Sfxn1 ENSMUSG00000021474 5720 0.749 0.749 - - - - - sideroflexin 1 [Source:MGI Symbol;Acc:MGI:2137677]
12. Hus1 ENSMUSG00000020413 906 0.749 - - - - 0.749 - HUS1 checkpoint clamp component [Source:MGI Symbol;Acc:MGI:1277962]
13. Ccar1 ENSMUSG00000020074 7538 0.748 0.748 - - - - - cell division cycle and apoptosis regulator 1 [Source:MGI Symbol;Acc:MGI:1914750]
14. Tmed5 ENSMUSG00000063406 1386 0.747 - - - - 0.747 - transmembrane p24 trafficking protein 5 [Source:MGI Symbol;Acc:MGI:1921586]
15. Psmd2 ENSMUSG00000006998 7708 0.745 0.745 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 [Source:MGI Symbol;Acc:MGI:1096584]
16. Aco1 ENSMUSG00000028405 1315 0.741 - - - - 0.741 - aconitase 1 [Source:MGI Symbol;Acc:MGI:87879]
17. Gspt1 ENSMUSG00000062203 9660 0.74 0.740 - - - - - G1 to S phase transition 1 [Source:MGI Symbol;Acc:MGI:1316728]
18. Slc25a53 ENSMUSG00000044348 516 0.739 - - - - 0.739 - solute carrier family 25, member 53 [Source:MGI Symbol;Acc:MGI:1914312]
19. Evi5l ENSMUSG00000011832 691 0.736 - - - - 0.736 - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
20. Eif4e ENSMUSG00000028156 12715 0.736 0.736 - - - - - eukaryotic translation initiation factor 4E [Source:MGI Symbol;Acc:MGI:95305]
21. Aco2 ENSMUSG00000022477 9058 0.735 0.735 - - - - - aconitase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:87880]
22. Lmnb2 ENSMUSG00000062075 3726 0.733 0.733 - - - - - lamin B2 [Source:MGI Symbol;Acc:MGI:96796]
23. Eif3c ENSMUSG00000030738 7179 0.733 0.733 - - - - - eukaryotic translation initiation factor 3, subunit C [Source:MGI Symbol;Acc:MGI:1926966]
24. Phb ENSMUSG00000038845 3385 0.732 - - - - 0.732 - prohibitin [Source:MGI Symbol;Acc:MGI:97572]
25. Ndufs1 ENSMUSG00000025968 9118 0.732 0.732 - - - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:MGI Symbol;Acc:MGI:2443241]
26. Atp6v1g1 ENSMUSG00000039105 9352 0.731 0.731 - - - - - ATPase, H+ transporting, lysosomal V1 subunit G1 [Source:MGI Symbol;Acc:MGI:1913540]
27. Prkar1a ENSMUSG00000020612 20773 0.728 0.728 - - - - - protein kinase, cAMP dependent regulatory, type I, alpha [Source:MGI Symbol;Acc:MGI:104878]
28. Cpsf7 ENSMUSG00000034820 8271 0.728 0.728 - - - - - cleavage and polyadenylation specific factor 7 [Source:MGI Symbol;Acc:MGI:1917826]
29. Gm5117 ENSMUSG00000093862 197 0.727 - - - - 0.727 - predicted gene 5117 [Source:MGI Symbol;Acc:MGI:3648041]
30. Gtpbp4 ENSMUSG00000021149 2845 0.727 0.727 - - - - - GTP binding protein 4 [Source:MGI Symbol;Acc:MGI:1916487]
31. Abi1 ENSMUSG00000058835 1247 0.726 - - - - 0.726 - abl-interactor 1 [Source:MGI Symbol;Acc:MGI:104913]
32. Igf2bp1 ENSMUSG00000013415 11515 0.723 0.723 - - - - - insulin-like growth factor 2 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1890357]
33. Pfn2 ENSMUSG00000027805 9346 0.723 0.723 - - - - - profilin 2 [Source:MGI Symbol;Acc:MGI:97550]
34. Klf4 ENSMUSG00000003032 309 0.723 - - - - 0.723 - Kruppel-like factor 4 (gut) [Source:MGI Symbol;Acc:MGI:1342287]
35. Dclre1a ENSMUSG00000025077 675 0.722 - - - - 0.722 - DNA cross-link repair 1A [Source:MGI Symbol;Acc:MGI:1930042]
36. Psmb5 ENSMUSG00000022193 5587 0.721 - 0.721 - - - - proteasome (prosome, macropain) subunit, beta type 5 [Source:MGI Symbol;Acc:MGI:1194513]
37. Ccnb1 ENSMUSG00000041431 10096 0.721 0.721 - - - - - cyclin B1 [Source:MGI Symbol;Acc:MGI:88302]
38. Ttf1 ENSMUSG00000026803 1251 0.721 - - - - 0.721 - transcription termination factor, RNA polymerase I [Source:MGI Symbol;Acc:MGI:105044]
39. Pcmt1 ENSMUSG00000019795, ENSMUSG00000116405 2517 0.72 - - - - 0.720 - protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:97502]
40. Simc1 ENSMUSG00000043183 1054 0.72 - - - - 0.720 - SUMO-interacting motifs containing 1 [Source:MGI Symbol;Acc:MGI:2442599]
41. Dcaf7 ENSMUSG00000049354 3750 0.72 0.720 - - - - - DDB1 and CUL4 associated factor 7 [Source:MGI Symbol;Acc:MGI:1919083]
42. Gm9531 ENSMUSG00000079225 629 0.719 - - - - 0.719 - predicted gene 9531 [Source:MGI Symbol;Acc:MGI:3779940]
43. Dcp2 ENSMUSG00000024472 3664 0.718 0.718 - - - - - decapping mRNA 2 [Source:MGI Symbol;Acc:MGI:1917890]
44. Srbd1 ENSMUSG00000024135 926 0.718 - - - - 0.718 - S1 RNA binding domain 1 [Source:MGI Symbol;Acc:MGI:1925836]
45. Polr2f ENSMUSG00000033020 8300 0.717 0.717 - - - - - polymerase (RNA) II (DNA directed) polypeptide F [Source:MGI Symbol;Acc:MGI:1349393]
46. Ndc80 ENSMUSG00000024056 2132 0.717 - - - - 0.717 - NDC80 kinetochore complex component [Source:MGI Symbol;Acc:MGI:1914302]
47. Phf13 ENSMUSG00000047777 1255 0.717 - - - - 0.717 - PHD finger protein 13 [Source:MGI Symbol;Acc:MGI:2446217]
48. Dpp8 ENSMUSG00000032393 1163 0.717 - - - - 0.717 - dipeptidylpeptidase 8 [Source:MGI Symbol;Acc:MGI:1921638]
49. Fgf5 ENSMUSG00000029337 249 0.717 - - - - 0.717 - fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
50. Gm22906 ENSMUSG00000092932 830 0.716 - - - - 0.716 - predicted gene, 22906 [Source:MGI Symbol;Acc:MGI:5452683]
51. Upf1 ENSMUSG00000058301 1982 0.716 - - - - 0.716 - UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
52. U2surp ENSMUSG00000032407 7845 0.715 - - - - 0.715 - U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208]
53. Mark4 ENSMUSG00000030397 335 0.715 - - - - 0.715 - MAP/microtubule affinity regulating kinase 4 [Source:MGI Symbol;Acc:MGI:1920955]
54. Cwf19l1 ENSMUSG00000025200 775 0.715 - - - - 0.715 - CWF19-like 1, cell cycle control (S. pombe) [Source:MGI Symbol;Acc:MGI:1919752]
55. Aebp2 ENSMUSG00000030232 1662 0.715 - - - - 0.715 - AE binding protein 2 [Source:MGI Symbol;Acc:MGI:1338038]
56. Rad23b ENSMUSG00000028426 7594 0.714 0.714 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:MGI Symbol;Acc:MGI:105128]
57. Coil ENSMUSG00000033983 461 0.714 - - - - 0.714 - coilin [Source:MGI Symbol;Acc:MGI:104842]
58. Fbxl19 ENSMUSG00000030811 233 0.714 - - - - 0.714 - F-box and leucine-rich repeat protein 19 [Source:MGI Symbol;Acc:MGI:3039600]
59. Chchd6 ENSMUSG00000030086 835 0.713 - - - - 0.713 - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:MGI Symbol;Acc:MGI:1913348]
60. Mzf1 ENSMUSG00000030380 234 0.713 - - - - 0.713 - myeloid zinc finger 1 [Source:MGI Symbol;Acc:MGI:107457]
61. Rassf7 ENSMUSG00000038618 391 0.713 - - - - 0.713 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 [Source:MGI Symbol;Acc:MGI:1914235]
62. Ddx26b 1085 0.713 - - - - 0.713 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X2
63. Parp3 ENSMUSG00000023249 110 0.713 - - - - 0.713 - poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]
64. Cdk13 ENSMUSG00000041297 2946 0.712 0.712 - - - - - cyclin-dependent kinase 13 [Source:MGI Symbol;Acc:MGI:1916812]
65. Map2k2 ENSMUSG00000035027 4504 0.712 0.712 - - - - - mitogen-activated protein kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346867]
66. Irx3 ENSMUSG00000031734 610 0.712 - - - - 0.712 - Iroquois related homeobox 3 [Source:MGI Symbol;Acc:MGI:1197522]
67. Prrg3 ENSMUSG00000033361 1270 0.712 - - - - 0.712 - proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane) [Source:MGI Symbol;Acc:MGI:2685214]
68. Alg2 ENSMUSG00000039740 4275 0.712 - - - - 0.712 - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:1914731]
69. Dennd4c ENSMUSG00000038024 349 0.712 - - - - 0.712 - DENN/MADD domain containing 4C [Source:MGI Symbol;Acc:MGI:1914769]
70. Skint8 ENSMUSG00000078599 109 0.712 - - - - 0.712 - selection and upkeep of intraepithelial T cells 8 [Source:MGI Symbol;Acc:MGI:3651523]
71. Cxcl5 ENSMUSG00000029371 85 0.712 - - - - 0.712 - chemokine (C-X-C motif) ligand 5 [Source:MGI Symbol;Acc:MGI:1096868]
72. Abcg4 ENSMUSG00000032131 186 0.711 - - - - 0.711 - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
73. Nrbp1 ENSMUSG00000029148 2373 0.711 - - - - 0.711 - nuclear receptor binding protein 1 [Source:MGI Symbol;Acc:MGI:2183436]
74. Gm4799 ENSMUSG00000071151 808 0.711 - - - - 0.711 - predicted gene 4799 [Source:MGI Symbol;Acc:MGI:3648850]
75. Il18bp ENSMUSG00000070427 230 0.711 - - - - 0.711 - interleukin 18 binding protein [Source:MGI Symbol;Acc:MGI:1333800]
76. Phkg1 ENSMUSG00000025537 65 0.711 - - - - 0.711 - phosphorylase kinase gamma 1 [Source:MGI Symbol;Acc:MGI:97579]
77. Gstt1 ENSMUSG00000001663 158 0.711 - - - - 0.711 - glutathione S-transferase, theta 1 [Source:MGI Symbol;Acc:MGI:107379]
78. Gm17414 Gm17414 131 0.71 - - - - 0.710 -
79. Gm13775 ENSMUSG00000081207 54 0.71 - - - - 0.710 - predicted gene 13775 [Source:MGI Symbol;Acc:MGI:3712466]
80. Nup98 ENSMUSG00000063550 482 0.71 - - - - 0.710 - nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]
81. Gm11975 ENSMUSG00000084231 70 0.71 - - - - 0.710 - predicted gene 11975 [Source:MGI Symbol;Acc:MGI:3650057]
82. Arih1 ENSMUSG00000025234 3800 0.71 0.710 - - - - - ariadne RBR E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1344363]
83. Cdk12 ENSMUSG00000003119 2101 0.71 - - - - 0.710 - cyclin-dependent kinase 12 [Source:MGI Symbol;Acc:MGI:1098802]
84. Sulf2 ENSMUSG00000006800 11931 0.71 0.710 - - - - - sulfatase 2 [Source:MGI Symbol;Acc:MGI:1919293]
85. B130046B21Rik ENSMUSG00000097414 59 0.71 - - - - 0.710 - RIKEN cDNA B130046B21 gene [Source:MGI Symbol;Acc:MGI:3704458]
86. Tmem243 ENSMUSG00000079659 181 0.709 - - - - 0.709 - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
87. Frg1 ENSMUSG00000031590 1255 0.709 - - - - 0.709 - FSHD region gene 1 [Source:MGI Symbol;Acc:MGI:893597]
88. Txnrd1 ENSMUSG00000020250 3143 0.709 0.709 - - - - - thioredoxin reductase 1 [Source:MGI Symbol;Acc:MGI:1354175]
89. B3galt1 ENSMUSG00000034780 267 0.709 - - - - 0.709 - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1349403]
90. Hdac2 ENSMUSG00000019777 24743 0.709 - 0.709 - - - - histone deacetylase 2 [Source:MGI Symbol;Acc:MGI:1097691]
91. Rpl35a ENSMUSG00000060636 411 0.708 - - - - 0.708 - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
92. Rasa1 ENSMUSG00000021549 3402 0.708 - - - - 0.708 - RAS p21 protein activator 1 [Source:MGI Symbol;Acc:MGI:97860]
93. Arnt ENSMUSG00000015522 777 0.708 - - - - 0.708 - aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]
94. Sf3b3 ENSMUSG00000033732 7529 0.707 - 0.707 - - - - splicing factor 3b, subunit 3 [Source:MGI Symbol;Acc:MGI:1289341]
95. Cdc25c ENSMUSG00000044201 1273 0.707 - - - - 0.707 - cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
96. Nr2f2 ENSMUSG00000030551 13233 0.707 0.707 - - - - - nuclear receptor subfamily 2, group F, member 2 [Source:MGI Symbol;Acc:MGI:1352452]
97. Gm9864 ENSMUSG00000052005 829 0.707 - - - - 0.707 - predicted gene 9864 [Source:MGI Symbol;Acc:MGI:3708663]
98. Mapk1ip1l ENSMUSG00000021840 14095 0.706 - 0.706 - - - - mitogen-activated protein kinase 1 interacting protein 1-like [Source:MGI Symbol;Acc:MGI:2444022]
99. Fnbp4 ENSMUSG00000008200 11005 0.706 0.706 - - - - - formin binding protein 4 [Source:MGI Symbol;Acc:MGI:1860513]
100. Nt5dc2 ENSMUSG00000071547 14294 0.706 0.706 - - - - - 5'-nucleotidase domain containing 2 [Source:MGI Symbol;Acc:MGI:1917271]

There are 24 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA