Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ccs

Gene Name Gene ID Reads Annotation
Ccs ENSMUSG00000034108 558 copper chaperone for superoxide dismutase [Source:MGI Symbol;Acc:MGI:1333783]







Genes with expression patterns similar to Ccs

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ccs ENSMUSG00000034108 558 6 1.000 1.000 1.000 1.000 1.000 1.000 copper chaperone for superoxide dismutase [Source:MGI Symbol;Acc:MGI:1333783]
2. E130307A14Rik ENSMUSG00000087177 1348 1.746 0.865 0.881 - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
3. Rpp30 ENSMUSG00000024800 2200 1.582 0.806 0.776 - - - - ribonuclease P/MRP 30 subunit [Source:MGI Symbol;Acc:MGI:1859683]
4. Rnf216 ENSMUSG00000045078 1216 1.569 0.727 0.842 - - - - ring finger protein 216 [Source:MGI Symbol;Acc:MGI:1344349]
5. Fam3c ENSMUSG00000029672 1429 0.953 - 0.953 - - - - family with sequence similarity 3, member C [Source:MGI Symbol;Acc:MGI:107892]
6. Rnpepl1 ENSMUSG00000026269 972 0.946 - 0.946 - - - - arginyl aminopeptidase (aminopeptidase B)-like 1 [Source:MGI Symbol;Acc:MGI:1914170]
7. Ednra ENSMUSG00000031616 1286 0.945 - 0.945 - - - - endothelin receptor type A [Source:MGI Symbol;Acc:MGI:105923]
8. Taf1b ENSMUSG00000059669 413 0.942 - 0.942 - - - - TATA-box binding protein associated factor, RNA polymerase I, B [Source:MGI Symbol;Acc:MGI:109577]
9. Aurkb ENSMUSG00000020897 2512 0.938 - 0.938 - - - - aurora kinase B [Source:MGI Symbol;Acc:MGI:107168]
10. Cryzl1 ENSMUSG00000058240 2195 0.938 - 0.938 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
11. 9430020K01Rik 552 0.935 - 0.935 - - - - RIKEN cDNA 9430020K01 gene, transcript variant X1
12. Scara5 ENSMUSG00000022032 68 0.933 - 0.933 - - - - scavenger receptor class A, member 5 [Source:MGI Symbol;Acc:MGI:1918395]
13. Irgm1 ENSMUSG00000046879, ENSMUSG00000116444 77 0.932 - 0.932 - - - - immunity-related GTPase family M member 1 [Source:NCBI gene;Acc:15944]
14. Slc16a9 ENSMUSG00000037762 83 0.932 - 0.932 - - - - solute carrier family 16 (monocarboxylic acid transporters), member 9 [Source:MGI Symbol;Acc:MGI:1914109]
15. Gm10307 ENSMUSG00000101093 159 0.931 - 0.931 - - - - predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
16. Gm4335 ENSMUSG00000097989 113 0.931 - 0.931 - - - - predicted gene 4335 [Source:MGI Symbol;Acc:MGI:3782519]
17. Fam132b 102 0.931 - 0.931 - - - - family with sequence similarity 132, member B, transcript variant X3
18. Fam120aos ENSMUSG00000097059 81 0.931 - 0.931 - - - - family with sequence similarity 120A, opposite strand [Source:MGI Symbol;Acc:MGI:1915378]
19. Gm16409 ENSMUSG00000075581 176 0.93 - 0.930 - - - - predicted gene 16409 [Source:MGI Symbol;Acc:MGI:3646708]
20. Gnpda2 ENSMUSG00000029209 182 0.928 - 0.928 - - - - glucosamine-6-phosphate deaminase 2 [Source:MGI Symbol;Acc:MGI:1915230]
21. Rfx5 ENSMUSG00000005774 204 0.928 - 0.928 - - - - regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]
22. Gm8349 ENSMUSG00000098208 124 0.928 - 0.928 - - - - predicted gene 8349 [Source:MGI Symbol;Acc:MGI:3643135]
23. Gm13652 ENSMUSG00000087333 91 0.928 - 0.928 - - - - predicted gene 13652 [Source:MGI Symbol;Acc:MGI:3650033]
24. Fndc3a ENSMUSG00000033487 1185 0.927 - 0.927 - - - - fibronectin type III domain containing 3A [Source:MGI Symbol;Acc:MGI:1196463]
25. Ccdc102a ENSMUSG00000063605 502 0.926 - 0.926 - - - - coiled-coil domain containing 102A [Source:MGI Symbol;Acc:MGI:2686927]
26. Map3k1 ENSMUSG00000021754 2844 0.926 - 0.926 - - - - mitogen-activated protein kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346872]
27. Gm16300 ENSMUSG00000089828 225 0.925 - 0.925 - - - - predicted gene 16300 [Source:MGI Symbol;Acc:MGI:3826587]
28. 0610005C13Rik ENSMUSG00000109644 478 0.925 - 0.925 - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
29. Dpy19l4 ENSMUSG00000045205 962 0.924 - 0.924 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
30. Rspo2 ENSMUSG00000051920 204 0.924 - 0.924 - - - - R-spondin 2 [Source:MGI Symbol;Acc:MGI:1922667]
31. Zfp947 ENSMUSG00000063383 396 0.924 - 0.924 - - - - zinc finger protein 947 [Source:MGI Symbol;Acc:MGI:3646759]
32. Tmem243 ENSMUSG00000079659 181 0.923 - 0.923 - - - - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
33. Usf1 ENSMUSG00000026641 336 0.923 - 0.923 - - - - upstream transcription factor 1 [Source:MGI Symbol;Acc:MGI:99542]
34. Gm16702 ENSMUSG00000097796 133 0.923 - 0.923 - - - - predicted gene, 16702 [Source:MGI Symbol;Acc:MGI:4439626]
35. C2cd2l ENSMUSG00000032120 223 0.922 - 0.922 - - - - C2 calcium-dependent domain containing 2-like [Source:MGI Symbol;Acc:MGI:1919014]
36. Tapt1 ENSMUSG00000046985 1206 0.922 - 0.922 - - - - transmembrane anterior posterior transformation 1 [Source:MGI Symbol;Acc:MGI:2683537]
37. Rrp15 ENSMUSG00000001305 966 0.921 - 0.921 - - - - ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
38. Pdgfb ENSMUSG00000000489 325 0.921 - 0.921 - - - - platelet derived growth factor, B polypeptide [Source:MGI Symbol;Acc:MGI:97528]
39. Npr3 ENSMUSG00000022206 2321 0.921 - 0.921 - - - - natriuretic peptide receptor 3 [Source:MGI Symbol;Acc:MGI:97373]
40. Wdr73 ENSMUSG00000025722 956 0.92 - 0.920 - - - - WD repeat domain 73 [Source:MGI Symbol;Acc:MGI:1919218]
41. Phospho2 ENSMUSG00000027088 921 0.92 - 0.920 - - - - phosphatase, orphan 2 [Source:MGI Symbol;Acc:MGI:1920623]
42. D930016D06Rik ENSMUSG00000097392 1429 0.92 - 0.920 - - - - RIKEN cDNA D930016D06 gene [Source:MGI Symbol;Acc:MGI:2442700]
43. Gm11944 ENSMUSG00000084941 286 0.919 - 0.919 - - - - predicted gene 11944 [Source:MGI Symbol;Acc:MGI:3702312]
44. 4933415A04Rik ENSMUSG00000045877 412 0.918 - 0.918 - - - - RIKEN cDNA 4933415A04 gene [Source:MGI Symbol;Acc:MGI:1922977]
45. Cyr61 ENSMUSG00000028195 563 0.918 - 0.918 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
46. Prcc ENSMUSG00000004895 527 0.917 - 0.917 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
47. Gm10689 ENSMUSG00000074412 328 0.917 - 0.917 - - - - predicted gene 10689 [Source:MGI Symbol;Acc:MGI:3642613]
48. Gfer ENSMUSG00000040888 1546 0.917 - 0.917 - - - - growth factor, augmenter of liver regeneration [Source:MGI Symbol;Acc:MGI:107757]
49. Zswim7 ENSMUSG00000014243 799 0.916 - 0.916 - - - - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
50. Map10 ENSMUSG00000050930 246 0.915 - 0.915 - - - - microtubule-associated protein 10 [Source:MGI Symbol;Acc:MGI:1921643]
51. Ccar2 ENSMUSG00000033712 2357 0.915 - 0.915 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
52. Nvl ENSMUSG00000026516 1431 0.914 - 0.914 - - - - nuclear VCP-like [Source:MGI Symbol;Acc:MGI:1914709]
53. Dido1 ENSMUSG00000038914 1891 0.914 - 0.914 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
54. Rell1 ENSMUSG00000047881 1229 0.914 - 0.914 - - - - RELT-like 1 [Source:MGI Symbol;Acc:MGI:2140767]
55. Slc50a1 ENSMUSG00000027953 774 0.914 - 0.914 - - - - solute carrier family 50 (sugar transporter), member 1 [Source:MGI Symbol;Acc:MGI:107417]
56. Flot1 ENSMUSG00000059714 1261 0.913 - 0.913 - - - - flotillin 1 [Source:MGI Symbol;Acc:MGI:1100500]
57. Med13l ENSMUSG00000018076 1863 0.912 - 0.912 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
58. Pank1 ENSMUSG00000033610 1083 0.912 - 0.912 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
59. Vps9d1 ENSMUSG00000001062 694 0.911 - 0.911 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
60. Tgfbrap1 ENSMUSG00000070939 1413 0.91 - 0.910 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
61. Zfp407 ENSMUSG00000048410 2356 0.91 - 0.910 - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
62. Pigu ENSMUSG00000038383 705 0.91 - 0.910 - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:MGI Symbol;Acc:MGI:3039607]
63. Chfr ENSMUSG00000014668 1287 0.91 - 0.910 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
64. Rab3gap1 ENSMUSG00000036104 515 0.909 - 0.909 - - - - RAB3 GTPase activating protein subunit 1 [Source:MGI Symbol;Acc:MGI:2445001]
65. Gm26822 ENSMUSG00000096921 421 0.909 - 0.909 - - - - predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
66. AW209491 ENSMUSG00000039182 618 0.909 - 0.909 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
67. Rc3h2 ENSMUSG00000075376 2007 0.909 - 0.909 - - - - ring finger and CCCH-type zinc finger domains 2 [Source:MGI Symbol;Acc:MGI:2442789]
68. Anapc4 ENSMUSG00000029176 2907 0.909 - 0.909 - - - - anaphase promoting complex subunit 4 [Source:MGI Symbol;Acc:MGI:1098673]
69. Lrrc27 ENSMUSG00000015980, ENSMUSG00000111011 83 0.908 0.908 - - - - - leucine rich repeat containing 27 [Source:MGI Symbol;Acc:MGI:1923862]
70. Snx17 ENSMUSG00000029146 2096 0.907 - 0.907 - - - - sorting nexin 17 [Source:MGI Symbol;Acc:MGI:2387801]
71. Mcam ENSMUSG00000032135 610 0.906 - 0.906 - - - - melanoma cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1933966]
72. Wnk3 ENSMUSG00000041245 552 0.905 - 0.905 - - - - WNK lysine deficient protein kinase 3 [Source:MGI Symbol;Acc:MGI:2652875]
73. Tmem39a ENSMUSG00000002845 1066 0.905 - 0.905 - - - - transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]
74. Arhgap23 ENSMUSG00000049807 1316 0.904 - 0.904 - - - - Rho GTPase activating protein 23 [Source:MGI Symbol;Acc:MGI:3697726]
75. Tceal3 ENSMUSG00000044550 742 0.904 - 0.904 - - - - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
76. Sec11c ENSMUSG00000024516 640 0.903 - 0.903 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
77. Lamtor2 ENSMUSG00000028062 570 0.903 - 0.903 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
78. Dip2a ENSMUSG00000020231 649 0.903 - 0.903 - - - - disco interacting protein 2 homolog A [Source:MGI Symbol;Acc:MGI:2385920]
79. Usp2 ENSMUSG00000032010 525 0.903 - 0.903 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
80. Gm15879 ENSMUSG00000084790 387 0.903 - 0.903 - - - - predicted gene 15879 [Source:MGI Symbol;Acc:MGI:3802012]
81. Eri3 ENSMUSG00000033423 3943 0.902 - 0.902 - - - - exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]
82. Ap1b1 ENSMUSG00000009090 1648 0.901 - 0.901 - - - - adaptor protein complex AP-1, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1096368]
83. Pgap1 ENSMUSG00000073678 833 0.9 - 0.900 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]
84. Ubox5 ENSMUSG00000027300 434 0.899 - 0.899 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
85. Zfp609 ENSMUSG00000040524 1316 0.898 - 0.898 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
86. Mex3d ENSMUSG00000048696 2206 0.898 - 0.898 - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
87. Gclc ENSMUSG00000032350 1737 0.898 - 0.898 - - - - glutamate-cysteine ligase, catalytic subunit [Source:MGI Symbol;Acc:MGI:104990]
88. Evi5l ENSMUSG00000011832 691 0.898 - 0.898 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
89. Mtx3 ENSMUSG00000021704 616 0.898 - 0.898 - - - - metaxin 3 [Source:MGI Symbol;Acc:MGI:2686040]
90. Oprm1 ENSMUSG00000000766 292 0.896 - 0.896 - - - - opioid receptor, mu 1 [Source:MGI Symbol;Acc:MGI:97441]
91. Crcp ENSMUSG00000025532 699 0.896 - 0.896 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
92. Timp1 ENSMUSG00000001131 780 0.896 - 0.896 - - - - tissue inhibitor of metalloproteinase 1 [Source:MGI Symbol;Acc:MGI:98752]
93. Rrnad1 ENSMUSG00000004896 798 0.895 - 0.895 - - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387197]
94. Aen ENSMUSG00000030609 963 0.895 - 0.895 - - - - apoptosis enhancing nuclease [Source:MGI Symbol;Acc:MGI:1915298]
95. Nsun4 ENSMUSG00000028706 804 0.895 - 0.895 - - - - NOL1/NOP2/Sun domain family, member 4 [Source:MGI Symbol;Acc:MGI:1919431]
96. Smoc2 ENSMUSG00000023886 712 0.894 - 0.894 - - - - SPARC related modular calcium binding 2 [Source:MGI Symbol;Acc:MGI:1929881]
97. Banp ENSMUSG00000025316 1068 0.893 - 0.893 - - - - BTG3 associated nuclear protein [Source:MGI Symbol;Acc:MGI:1889023]
98. Zfp30 ENSMUSG00000047473 562 0.893 - 0.893 - - - - zinc finger protein 30 [Source:MGI Symbol;Acc:MGI:99178]
99. 2210016L21Rik ENSMUSG00000029559 1199 0.893 0.893 - - - - - RIKEN cDNA 2210016L21 gene [Source:MGI Symbol;Acc:MGI:1919607]
100. Vwf ENSMUSG00000001930 658 0.892 0.892 - - - - - Von Willebrand factor [Source:MGI Symbol;Acc:MGI:98941]

There are 466 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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