Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for XRCC5

Gene Name Gene ID Reads Annotation
XRCC5 ENSGALG00000011492 6802 X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]











Genes with expression patterns similar to XRCC5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. XRCC5 ENSGALG00000011492 6802 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
2. SBNO1 ENSGALG00000003392 6731 1.735 - - 0.765 - - - - 0.970 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
3. DLC1 ENSGALG00000013715 5297 1.714 - - 0.778 - - - - 0.936 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
4. TPD52 ENSGALG00000040167 9891 1.703 - - - - - - 0.736 0.967 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
5. TMEM192 ENSGALG00000009528 2428 1.679 - - - - - - 0.740 0.939 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
6. FUNDC2 ENSGALG00000029585 9334 1.672 - - - - - - 0.733 0.939 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
7. ENSGALG00000017396 ENSGALG00000017396 9028 1.655 - - - - - - 0.786 0.869 - -
8. RCOR3 ENSGALG00000009871 7022 1.653 - - - - - - 0.714 0.939 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
9. MRPL54 ENSGALG00000027611 39450 1.642 - - - - - - 0.777 0.865 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
10. FAM98A ENSGALG00000010428 9585 1.578 - - - - - - 0.736 0.842 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
11. TMEM167A ENSGALG00000027332 13862 1.569 - - 0.745 - - - 0.824 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
12. PIGK ENSGALG00000009015 7942 1.527 - - 0.723 - - - 0.804 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
13. FCF1 ENSGALG00000010275 24928 1.519 - - - - - - 0.755 0.764 - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
14. UBE2B ENSGALG00000032664 6069 1.508 - - 0.730 - - - 0.778 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
15. CDC45 ENSGALG00000001616 8432 1.506 - - 0.742 - - - 0.764 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
16. SP3 ENSGALG00000031796 8997 1.497 - - 0.732 - - - 0.765 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
17. SKAP2 ENSGALG00000030081 13746 1.481 - - - - - - 0.771 0.710 - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
18. SCML2 ENSGALG00000016537 9348 1.463 - - 0.754 - - - 0.709 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
19. GTF2H2 ENSGALG00000002399 2361 1.412 - - 0.701 - - - 0.711 - - - general transcription factor IIH subunit 2, transcript variant X2
20. GTF2IRD1 ENSGALG00000001263 14716 1.408 - - - - - - 0.708 0.700 - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
21. NUP107 ENSGALG00000009934 2097 0.972 - - - - - - - 0.972 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
22. INPP5A ENSGALG00000010493 6769 0.971 - - - - - - - 0.971 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
23. ANKRD11 ENSGALG00000006222 12327 0.963 - - - - - - - 0.963 - - ankyrin repeat domain 11, transcript variant X2
24. IFNAR2 ENSGALG00000041867 1596 0.956 - - - - - - - 0.956 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
25. PPP3R1 ENSGALG00000023648 3417 0.956 - - - - - - - 0.956 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
26. CRELD2 ENSGALG00000008551 2084 0.942 - - - - - - - 0.942 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
27. RNFT1 ENSGALG00000005205 2888 0.942 - - - - - - - 0.942 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
28. ATP2B4 ENSGALG00000003601 3746 0.941 - - - - - - - 0.941 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
29. RNF168 ENSGALG00000006392 507 0.941 - - - - - - - 0.941 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
30. PIGL ENSGALG00000004492 669 0.941 - - - - - - - 0.941 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
31. ENSGALG00000012250 ENSGALG00000012250 581 0.941 - - - - - - - 0.941 - -
32. ELAVL4 ENSGALG00000010533 4978 0.941 - - - - - - - 0.941 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
33. PDCD6IP ENSGALG00000033500 580 0.941 - - - - - - - 0.941 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
34. SLC35D1 ENSGALG00000011121 4456 0.941 - - - - - - - 0.941 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
35. SNIP1 ENSGALG00000002010 1429 0.941 - - - - - - - 0.941 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
36. ZNF319 ENSGALG00000000999 1272 0.941 - - - - - - - 0.941 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
37. SPDYA ENSGALG00000017392 503 0.941 - - - - - - - 0.941 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
38. RFT1 ENSGALG00000001945 2446 0.941 - - - - - - - 0.941 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
39. PMP22 ENSGALG00000031425 5358 0.941 - - - - - - - 0.941 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
40. FBF1 ENSGALG00000002179 1738 0.941 - - - - - - - 0.941 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
41. RAI2 ENSGALG00000016538 1074 0.94 - - - - - - - 0.940 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
42. TMEM126A ENSGALG00000014066 6149 0.94 - - - - - - - 0.940 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
43. C6ORF192 C6ORF192 4224 0.939 - - - - - - - 0.939 - -
44. NVL ENSGALG00000009322 5286 0.939 - - - - - - - 0.939 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
45. CENPL ENSGALG00000038411 4867 0.939 - - - - - - - 0.939 - - centromere protein L [Source:NCBI gene;Acc:426563]
46. CETN1 ENSGALG00000026741 7243 0.939 - - - - - - - 0.939 - - centrin 1 [Source:NCBI gene;Acc:422668]
47. G3BP2 ENSGALG00000010882 21129 0.938 - - - - - - - 0.938 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
48. ALS2 ENSGALG00000008415 2576 0.938 - - - - - - - 0.938 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
49. NBL1 ENSGALG00000040297 8165 0.938 - - - - - - - 0.938 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
50. ATE1 ENSGALG00000009502 3751 0.938 - - - - - - - 0.938 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
51. ENSGALG00000023609 ENSGALG00000023609 6933 0.937 - - - - - - - 0.937 - -
52. MAP2K2 ENSGALG00000001267 3857 0.936 - - - - - - - 0.936 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
53. CDCA7 ENSGALG00000040833 7484 0.936 - - - - - - - 0.936 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
54. PPM1D ENSGALG00000035610 6530 0.934 - - - - - - - 0.934 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
55. CRNKL1 ENSGALG00000008429 7280 0.933 - - - - - - - 0.933 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
56. RBM7 ENSGALG00000007017 8779 0.933 - - - - - - - 0.933 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
57. TTL ENSGALG00000008614 3991 0.933 - - - - - - - 0.933 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
58. YAF2 ENSGALG00000009540 8452 0.932 - - - - - - - 0.932 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
59. PDHB ENSGALG00000029576 12254 0.931 - - - - - - - 0.931 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
60. gga-mir-6587 ENSGALG00000026386 9441 0.927 - - - - - - - 0.927 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
61. EXO1 ENSGALG00000010748 7572 0.924 - - - - - - - 0.924 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
62. JSC JSC 7982 0.921 - - - - - - - 0.921 - -
63. COX7A2L ENSGALG00000037996 13646 0.917 - - - - - - - 0.917 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
64. RFC3 ENSGALG00000017064 7011 0.912 - - - - - - - 0.912 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
65. KIAA0196 KIAA0196 4011 0.91 - - - - - - - 0.910 - -
66. SFT2D1 ENSGALG00000020005 10855 0.904 - - - - - - - 0.904 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
67. GARS ENSGALG00000005694 18264 0.904 - - - - - - - 0.904 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
68. AP2B1 ENSGALG00000042125 13229 0.903 - - - - - - - 0.903 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
69. PRTG ENSGALG00000037336 34665 0.9 - - - - - - - 0.900 - - protogenin [Source:NCBI gene;Acc:415407]
70. XPO5 ENSGALG00000010341 24765 0.898 - - - - - - - 0.898 - - exportin 5 [Source:NCBI gene;Acc:421450]
71. CHD4 ENSGALG00000013565 25695 0.891 - - - - - - - 0.891 - - chromodomain helicase DNA binding protein 4
72. LRPPRC ENSGALG00000009967 17091 0.885 - - - - - - - 0.885 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
73. PPA2 ENSGALG00000010582 22301 0.867 - - - - - - - 0.867 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
74. SNRNP27 ENSGALG00000013883 22212 0.856 - - - - - - 0.856 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
75. RTCB ENSGALG00000012611 14360 0.852 - - - - - - 0.852 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
76. Sep-02_1 Sep-02_1 19203 0.851 - - - - - - - 0.851 - -
77. INCENP ENSGALG00000007537 16617 0.85 - - - - - - 0.850 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
78. TNFAIP8L1 ENSGALG00000004266 12611 0.841 - - - - - - - 0.841 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
79. GABARAPL2 ENSGALG00000003208 9195 0.84 - - - - - - 0.840 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
80. SLC25A39 ENSGALG00000042894 10654 0.839 - - - - - - - 0.839 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
81. CDC42EP4 ENSGALG00000023364 9240 0.838 - - - - - - - 0.838 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
82. ZOV3 ZOV3 3267 0.838 - - - - - - - 0.838 - -
83. PTTG1 17936 0.837 - - - - - - 0.837 - - - pituitary tumor-transforming 1, transcript variant X1
84. QSER1 ENSGALG00000012030 4490 0.837 - - 0.837 - - - - - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
85. TFB2M ENSGALG00000010651 4374 0.835 - - - - - - 0.835 - - - transcription factor B2, mitochondrial
86. DLD ENSGALG00000007931 11011 0.835 - - - - - - 0.835 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
87. SMC4 ENSGALG00000009553 15715 0.833 - - - - - - 0.833 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
88. AP2A2 ENSGALG00000006799 13874 0.833 - - - - - - 0.833 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
89. SALL4 ENSGALG00000041365 6760 0.832 - - - - - - 0.832 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
90. ABHD17B ENSGALG00000015139 2805 0.83 - - - - - - 0.830 - - - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
91. KLHDC4 ENSGALG00000037315 9828 0.83 - - - - - - 0.830 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
92. CLN8 ENSGALG00000039606 4209 0.83 - - - - - - 0.830 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
93. R3HDM1 ENSGALG00000012246 6580 0.83 - - - - - - 0.830 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
94. GPD1L ENSGALG00000011481 4224 0.83 - - - - - - 0.830 - - - glycerol-3-phosphate dehydrogenase 1 like [Source:HGNC Symbol;Acc:HGNC:28956]
95. NASP ENSGALG00000010255 28423 0.83 - - - - - - 0.830 - - - nuclear autoantigenic sperm protein, transcript variant X3
96. NCDN ENSGALG00000002408 6180 0.828 - - - - - - 0.828 - - - neurochondrin [Source:NCBI gene;Acc:419633]
97. GPC4 ENSGALG00000006080 56498 0.828 - - - - - - 0.828 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
98. FBXO3 ENSGALG00000034029 15089 0.823 - - - - - - 0.823 - - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
99. GGA.31975 GGA.31975 8825 0.823 - - - - - - 0.823 - - -
100. GPR162 ENSGALG00000022926 7181 0.822 - - - - - - 0.822 - - - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]

There are 532 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA