Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for VTA1

Gene Name Gene ID Reads Annotation
VTA1 ENSGALG00000013810 4998 vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]











Genes with expression patterns similar to VTA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VTA1 ENSGALG00000013810 4998 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
2. SFXN4 ENSGALG00000009350 3899 2.466 - - 0.802 - - - 0.963 0.701 - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
3. BTBD9 ENSGALG00000010131 1870 2.454 - - 0.768 - - - 0.971 0.715 - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
4. PEMT ENSGALG00000004875 4094 2.419 - - 0.751 - - - 0.964 0.704 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
5. TRAF3IP1 ENSGALG00000004236 7094 2.37 - - 0.773 - - - 0.864 0.733 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
6. MKRN1 ENSGALG00000012852 6907 1.797 - - - - - - 0.948 0.849 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
7. BBX ENSGALG00000015353 1281 1.783 - - 0.794 - - - 0.989 - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
8. SUCO ENSGALG00000003081 4116 1.775 - - - - - - 0.970 0.805 - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
9. MORC2 2505 1.767 - - - - - - 0.982 0.785 - - MORC family CW-type zinc finger 2, transcript variant X2
10. AASDHPPT ENSGALG00000027981 1017 1.747 - - 0.755 - - - 0.992 - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
11. MTRF1L ENSGALG00000013609 1581 1.745 - - - - - - 0.986 0.759 - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
12. FBXO45 ENSGALG00000037281 3936 1.724 - - 0.738 - - - 0.986 - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
13. CDK5RAP2 ENSGALG00000041102 4042 1.722 - - - - - - 0.966 0.756 - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
14. UTP18 ENSGALG00000002985 7129 1.713 - - - - - - 0.956 0.757 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
15. UBE2K ENSGALG00000014290 2138 1.71 - - - - - - 0.990 0.720 - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
16. DNMT3A ENSGALG00000041454 9607 1.691 - - - - - - 0.981 0.710 - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
17. WBP4 ENSGALG00000016949 5858 1.686 - - 0.703 - - - 0.983 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
18. C1H21ORF91 ENSGALG00000028290 5550 1.674 - - - - - - 0.863 0.811 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
19. NCBP2_1 ENSGALG00000006843 7170 1.648 - - - - - - 0.874 0.774 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
20. VPS4B ENSGALG00000012879 6720 1.631 - - 0.708 - - - 0.923 - - - vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]
21. TBP ENSGALG00000011171 5759 1.592 - - - - - - 0.855 0.737 - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
22. ACP1 ENSGALG00000016363 10636 1.591 - - - - - - 0.842 0.749 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
23. METTL5 ENSGALG00000009676 3252 1.589 - - 0.847 - - - - 0.742 - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
24. HINT3 ENSGALG00000044342 5674 1.582 - - 0.779 - - - - 0.803 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
25. MRPS33 ENSGALG00000028879 17966 1.556 - - 0.759 - - - 0.797 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
26. EMC3 ENSGALG00000003738 10363 1.55 - - - - - - 0.760 0.790 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
27. SPDL1 ENSGALG00000001942 4403 1.547 - - 0.721 - - - - 0.826 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
28. ERCC3 ENSGALG00000011515 3133 1.52 - - 0.736 - - - - 0.784 - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
29. CHDZ CHDZ 10381 1.508 - - - - - - 0.788 0.720 - -
30. LBR 6686 1.501 - - 0.706 - - - - 0.795 - - lamin B receptor, transcript variant X4
31. MBSP MBSP 5634 1.501 - - 0.776 - - - - 0.725 - -
32. SPCS1 ENSGALG00000001655 7718 1.498 - - 0.737 - - - - 0.761 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
33. ZMPSTE24 ENSGALG00000000855 5144 1.489 - - 0.738 - - - - 0.751 - - zinc metallopeptidase STE24 [Source:HGNC Symbol;Acc:HGNC:12877]
34. DAK DAK 13208 1.489 - - 0.739 - - - 0.750 - - -
35. SHMT1 ENSGALG00000005046 1430 1.47 - - 0.749 - - - - 0.721 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
36. SRP14 ENSGALG00000009592 17828 1.455 - - - - - - 0.702 0.753 - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
37. GON4L ENSGALG00000014643 1737 1.453 - - 0.727 - - - - 0.726 - - gon-4 like, transcript variant X2
38. WDR3 ENSGALG00000014791 5856 1.451 - - 0.713 - - - - 0.738 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
39. SLC12A4 ENSGALG00000034179 5674 1.441 - - 0.728 - - - - 0.713 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
40. ORC3 ENSGALG00000015800 4316 1.433 - - 0.715 - - - - 0.718 - - origin recognition complex subunit 3 [Source:NCBI gene;Acc:421822]
41. KDELR3 ENSGALG00000032313 4376 0.996 - - - - - - 0.996 - - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
42. GEMIN5 ENSGALG00000003937 1685 0.996 - - - - - - 0.996 - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
43. XRCC2 ENSGALG00000026865 2214 0.994 - - - - - - 0.994 - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
44. NFYA ENSGALG00000003247 1894 0.992 - - - - - - 0.992 - - - nuclear transcription factor Y subunit alpha [Source:NCBI gene;Acc:419917]
45. CMC1 ENSGALG00000025811 3939 0.992 - - - - - - 0.992 - - - C-X9-C motif containing 1
46. EFCAB10 ENSGALG00000045949 514 0.991 - - - - - - 0.991 - - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
47. SCYL3 ENSGALG00000036264 2935 0.991 - - - - - - 0.991 - - - SCY1 like pseudokinase 3 [Source:NCBI gene;Acc:424396]
48. PTCHD1 ENSGALG00000016358 3882 0.99 - - - - - - 0.990 - - - patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
49. SETD7 ENSGALG00000009800 1230 0.99 - - - - - - 0.990 - - - SET domain containing lysine methyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:30412]
50. EPS8 295 0.99 - - - - - - 0.990 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X4
51. F2RL1 ENSGALG00000014984 565 0.99 - - - - - - 0.990 - - - F2R like trypsin receptor 1 [Source:NCBI gene;Acc:427213]
52. ANXA6 ENSGALG00000004357 2891 0.99 - - - - - - 0.990 - - - annexin A6 [Source:NCBI gene;Acc:395481]
53. TSTA3 ENSGALG00000031525 3391 0.99 - - - - - - 0.990 - - - tissue specific transplantation antigen P35B [Source:NCBI gene;Acc:420292]
54. PXMP4 ENSGALG00000003042 1035 0.99 - - - - - - 0.990 - - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
55. BECN1 ENSGALG00000002973 1569 0.988 - - - - - - 0.988 - - - beclin 1 [Source:NCBI gene;Acc:420018]
56. FAIM ENSGALG00000012082 1209 0.988 - - - - - - 0.988 - - - Fas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]
57. HS2ST1 ENSGALG00000028423 4153 0.988 - - - - - - 0.988 - - - heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
58. CCDC43 ENSGALG00000001022 5462 0.987 - - - - - - 0.987 - - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
59. TBC1D19 ENSGALG00000029673 1868 0.987 - - - - - - 0.987 - - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
60. C18H17ORF106 C18H17ORF106 2355 0.987 - - - - - - 0.987 - - -
61. MLC1 ENSGALG00000040038 206 0.986 - - - - - - 0.986 - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
62. SLC29A1 ENSGALG00000010182 1522 0.986 - - - - - - 0.986 - - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
63. PHKG1 ENSGALG00000002485 15214 0.986 - - - - - - 0.986 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
64. ORC5 ENSGALG00000008175 3426 0.985 - - - - - - 0.985 - - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
65. UBE4A ENSGALG00000031134 5851 0.985 - - - - - - 0.985 - - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
66. ENSGALG00000026460 ENSGALG00000026460 607 0.985 - - - - - - 0.985 - - -
67. TNFRSF21 ENSGALG00000016719 2762 0.984 - - - - - - 0.984 - - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
68. GKAP1 ENSGALG00000012586 2908 0.984 - - - - - - 0.984 - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
69. GPATCH2 ENSGALG00000009627 4061 0.984 - - - - - - 0.984 - - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
70. ZFX ENSGALG00000016327 5470 0.984 - - - - - - 0.984 - - - zinc finger protein, X-linked, transcript variant X4
71. LAMTOR3 ENSGALG00000000055 6311 0.983 - - - - - - 0.983 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:NCBI gene;Acc:425210]
72. WDR77 ENSGALG00000040864 3766 0.983 - - - - - - 0.983 - - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]
73. RBFA ENSGALG00000036067 6542 0.983 - - - - - - 0.983 - - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
74. ENSGALG00000001166 ENSGALG00000001166 2013 0.983 - - - - - - 0.983 - - -
75. HDHD3 ENSGALG00000044101 6333 0.982 - - - - - - 0.982 - - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
76. PISD ENSGALG00000006872 3539 0.982 - - - - - - 0.982 - - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
77. ZCCHC10 ENSGALG00000036666 5148 0.981 - - - - - - 0.981 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
78. TAOK3 ENSGALG00000007396 3094 0.981 - - - - - - 0.981 - - - TAO kinase 3 [Source:NCBI gene;Acc:395499]
79. DDX54 ENSGALG00000007490 8729 0.981 - - - - - - 0.981 - - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
80. BYSL ENSGALG00000003467 7555 0.979 - - - - - - 0.979 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
81. GINS1 ENSGALG00000008538 4786 0.979 - - - - - - 0.979 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
82. DCAF4 ENSGALG00000009345 2604 0.979 - - - - - - 0.979 - - - DDB1 and CUL4 associated factor 4
83. ENSGALG00000006671 ENSGALG00000006671 4194 0.978 - - - - - - 0.978 - - -
84. INPP5E ENSGALG00000001964 3580 0.977 - - - - - - 0.977 - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
85. SKA3 ENSGALG00000017128 4176 0.976 - - - - - - 0.976 - - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
86. FNTA ENSGALG00000015397 3741 0.976 - - - - - - 0.976 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
87. TMEM47 ENSGALG00000027198 3619 0.975 - - - - - - 0.975 - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
88. TMEM38A ENSGALG00000003778 3867 0.974 - - - - - - 0.974 - - - transmembrane protein 38A [Source:NCBI gene;Acc:771253]
89. JUP ENSGALG00000017414 6920 0.974 - - - - - - 0.974 - - - junction plakoglobin [Source:NCBI gene;Acc:429710]
90. SPR ENSGALG00000000067 3456 0.974 - - - - - - 0.974 - - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
91. GPATCH1 ENSGALG00000004839 6455 0.973 - - - - - - 0.973 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
92. ZNF335 ENSGALG00000041370 4740 0.972 - - - - - - 0.972 - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
93. PEO1 PEO1 6747 0.972 - - - - - - 0.972 - - -
94. AKAP17A ENSGALG00000016686 2469 0.972 - - - - - - 0.972 - - - A-kinase anchoring protein 17A [Source:NCBI gene;Acc:418664]
95. NDP ENSGALG00000016222 1067 0.972 - - - - - - 0.972 - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
96. XPC ENSGALG00000006357 2484 0.971 - - - - - - 0.971 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
97. STOML2 STOML2 15566 0.971 - - - - - - 0.971 - - -
98. NDUFV1 ENSGALG00000042809 6222 0.971 - - - - - - 0.971 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
99. MKI67 ENSGALG00000025996 28136 0.97 - - - - - - 0.970 - - - marker of proliferation Ki-67, transcript variant X3
100. NELL2 ENSGALG00000009601 4243 0.969 - - - - - - 0.969 - - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]

There are 744 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA