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Results for VPS18

Gene Name Gene ID Reads Annotation
VPS18 ENSGALG00000008496 594 VPS18, CORVET/HOPS core subunit [Source:NCBI gene;Acc:423207]











Genes with expression patterns similar to VPS18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VPS18 ENSGALG00000008496 594 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 VPS18, CORVET/HOPS core subunit [Source:NCBI gene;Acc:423207]
2. DIRC2 ENSGALG00000032632 137 0.79 - - - - - - - 0.790 - - disrupted in renal carcinoma 2 [Source:HGNC Symbol;Acc:HGNC:16628]
3. MOB1A ENSGALG00000039203 240 0.781 - - - - - - - 0.781 - - MOB kinase activator 1A [Source:HGNC Symbol;Acc:HGNC:16015]
4. GEN1 ENSGALG00000016468 336 0.781 - - - - - - - 0.781 - - GEN1, Holliday junction 5' flap endonuclease, transcript variant X2
5. ENSGALG00000010113 ENSGALG00000010113 508 0.772 - - - - - - - - - 0.772
6. FAM184A ENSGALG00000014881 75 0.772 - - - - - - - - - 0.772 family with sequence similarity 184 member A [Source:HGNC Symbol;Acc:HGNC:20991]
7. FUCA2 ENSGALG00000013773 67 0.758 - - - - - - - 0.758 - - alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]
8. KCNJ11 ENSGALG00000020505 196 0.753 - - - - - - - - - 0.753 potassium voltage-gated channel subfamily J member 11 [Source:HGNC Symbol;Acc:HGNC:6257]
9. PCYOX1L ENSGALG00000040340 2162 0.746 - - - - - - - 0.746 - - prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
10. SLC38A6 ENSGALG00000011893 737 0.744 - - - - - - - 0.744 - - solute carrier family 38 member 6 [Source:HGNC Symbol;Acc:HGNC:19863]
11. MPP2 ENSGALG00000035580 383 0.743 - - - - - - - 0.743 - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
12. KPNA5 ENSGALG00000014937 28 0.743 - - - - - - - 0.743 - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
13. RB1CC1 ENSGALG00000015259 4211 0.74 - - - - - - 0.740 - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
14. SHPK ENSGALG00000004637 2386 0.738 - - - - - - - 0.738 - - sedoheptulokinase, transcript variant X1
15. C8orf34 ENSGALG00000034561 286 0.738 - - - - - - - 0.738 - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
16. IRF10 IRF10 623 0.73 - - - - - - - 0.730 - -
17. KLHL15 ENSGALG00000016345 1638 0.73 - - - - - - 0.730 - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
18. TTL ENSGALG00000008614 3991 0.728 - - - - - - 0.728 - - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
19. L3MBTL3 ENSGALG00000034030 113 0.727 - - - - - - - 0.727 - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
20. FAM174B ENSGALG00000006887 549 0.726 - - - - - - - 0.726 - - family with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]
21. FAM189A2 ENSGALG00000015110 273 0.723 - - - - - - - 0.723 - - family with sequence similarity 189 member A2 [Source:HGNC Symbol;Acc:HGNC:24820]
22. ATP11A ENSGALG00000041644 74 0.721 - - - - - - - - - 0.721 ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
23. ARHGAP27 376 0.72 - - - - - - - 0.720 - - Rho GTPase activating protein 27, transcript variant X4
24. C22orf39 ENSGALG00000044654 1364 0.718 - - - - - - - 0.718 - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
25. CCP110 ENSGALG00000006925 59 0.717 - - - - - - - 0.717 - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
26. NCOA7 ENSGALG00000014834 1232 0.716 - - - - - - - 0.716 - - nuclear receptor coactivator 7 [Source:NCBI gene;Acc:421717]
27. SULT1B1 ENSGALG00000023120 523 0.716 - - - - - - - 0.716 - - sulfotransferase family cytosolic 1B member 1 [Source:NCBI gene;Acc:395227]
28. FBXO38 ENSGALG00000038627 2658 0.715 - - - - - - - 0.715 - - F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
29. GYS2 ENSGALG00000013265 14 0.715 - - - - - - - 0.715 - - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
30. FST ENSGALG00000014908 3182 0.714 - - - - - - - 0.714 - - follistatin [Source:NCBI gene;Acc:396119]
31. MED15 ENSGALG00000006430 814 0.714 - - - - - - - 0.714 - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
32. RAD51D ENSGALG00000031918 1312 0.713 - - - - - 0.713 - - - - RAD51 paralog D [Source:NCBI gene;Acc:417528]
33. PSMD2 ENSGALG00000006294 6805 0.712 - - - - - - 0.712 - - - proteasome 26S subunit, non-ATPase 2 [Source:NCBI gene;Acc:425294]
34. PPP6C ENSGALG00000001013 4110 0.71 - - - - - - 0.710 - - - protein phosphatase 6 catalytic subunit [Source:NCBI gene;Acc:772354]
35. FAM171B ENSGALG00000002646 837 0.709 - - - - - - - 0.709 - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
36. NKX1-1 ENSGALG00000035650 187 0.709 - - - - - - - 0.709 - - NK1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:24975]
37. BNC1 ENSGALG00000006041 63 0.707 - - - - - - - 0.707 - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
38. BTBD6 ENSGALG00000033813 163 0.706 - - - - - - - - - 0.706 BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
39. TMX2 ENSGALG00000007350 9052 0.706 - - - - - - - 0.706 - - thioredoxin related transmembrane protein 2, transcript variant X2
40. RPAP3 ENSGALG00000009743 3380 0.704 - - - - - - 0.704 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
41. DMXL2 ENSGALG00000039924 672 0.703 - - - - - - - - - 0.703 Dmx like 2 [Source:HGNC Symbol;Acc:HGNC:2938]
42. FANCD2 ENSGALG00000003720 634 0.702 - - - - - - - 0.702 - - Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
43. PER2 ENSGALG00000005521 1115 0.701 - - - - - - 0.701 - - - period circadian regulator 2 [Source:NCBI gene;Acc:374116]
44. TTC12 1384 0.701 - - - - - - - 0.701 - - tetratricopeptide repeat domain 12, transcript variant X4
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA