Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRPA1

Gene Name Gene ID Reads Annotation
TRPA1 ENSGALG00000034751 148 Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]











Genes with expression patterns similar to TRPA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRPA1 ENSGALG00000034751 148 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
2. SMAD9 ENSGALG00000017050 11 1.741 - - - - - - - 0.968 - 0.773 SMAD family member 9 [Source:NCBI gene;Acc:395543]
3. MAPKAPK3 ENSGALG00000002283 30 1.716 - - - - - 0.853 - 0.863 - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
4. WARS ENSGALG00000011228 193 1.646 - - 0.800 - - - - 0.846 - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
5. CRAT ENSGALG00000037443 78 1.637 - - - - - 0.736 - 0.901 - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
6. GLB1L ENSGALG00000011328 223 1.621 - - 0.847 - - 0.774 - - - - galactosidase beta 1 like [Source:HGNC Symbol;Acc:HGNC:28129]
7. TSPAN33 ENSGALG00000013528 832 1.613 - - - - - 0.826 - 0.787 - - tetraspanin 33, transcript variant X2
8. NOV ENSGALG00000038364 190 1.413 - - 0.703 - - - - - - 0.710 nephroblastoma overexpressed [Source:NCBI gene;Acc:396204]
9. TRAF3 ENSGALG00000011389 7 1 - - - - - 1.000 - - - - TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]
10. CCDC147 CCDC147 53 0.996 - - - - - - - 0.996 - -
11. CHRM2 ENSGALG00000012894 21 0.996 - - - - - - - 0.996 - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
12. PDPR ENSGALG00000002690 45 0.97 - - - - - - - 0.970 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
13. CHFR ENSGALG00000002180 17 0.968 - - - - - - - 0.968 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
14. ADRA2C ENSGALG00000015608 42 0.968 - - - - - - - 0.968 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
15. ATP6V1A ENSGALG00000014800 4 0.965 - - - - - - - 0.965 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
16. CCDC39 ENSGALG00000021855 23 0.965 - - - - - - - 0.965 - - coiled-coil domain containing 39
17. MLNR ENSGALG00000017003 10 0.965 - - - - - - - 0.965 - - motilin receptor [Source:NCBI gene;Acc:428072]
18. C9orf152 C9orf152 3 0.965 - - - - - - - 0.965 - -
19. ASTE1 ENSGALG00000036171 155 0.962 - - - - - - - 0.962 - - asteroid homolog 1 (Drosophila), transcript variant X3
20. C9ORF9 C9ORF9 13 0.956 - - - - - - - 0.956 - -
21. MCF2 ENSGALG00000006562 59 0.948 - - - - - - - 0.948 - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
22. ABCB11 ENSGALG00000010891 24 0.944 - - - - - - - 0.944 - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
23. NMRK2 ENSGALG00000025751 57 0.938 - - - - - - - 0.938 - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
24. PCNXL4 PCNXL4 58 0.932 - - - - - - - 0.932 - -
25. TICRR ENSGALG00000006631 495 0.931 - - - - - - - 0.931 - - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
26. RAMP1 ENSGALG00000003821 389 0.929 - - - - - - - 0.929 - - receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]
27. EPHA10 ENSGALG00000001912 5 0.928 - - 0.928 - - - - - - - EPH receptor A10, transcript variant X1
28. SLC6A18 ENSGALG00000013180 6 0.928 - - 0.928 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
29. ENSGALG00000020389 ENSGALG00000020389 5 0.928 - - 0.928 - - - - - - -
30. ENSGALG00000019568 ENSGALG00000019568 25 0.927 - - 0.927 - - - - - - -
31. ENSGALG00000026461 ENSGALG00000026461 61 0.924 - - 0.924 - - - - - - -
32. ID3 ENSGALG00000035317 52 0.924 - - 0.924 - - - - - - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
33. ATXN1L ENSGALG00000028253 17 0.923 - - - - - 0.923 - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
34. DCHS1 ENSGALG00000017334 12 0.921 - - - - - 0.921 - - - - dachsous cadherin-related 1, transcript variant X1
35. MYOZ1 ENSGALG00000005226 1 0.92 - - - - - 0.920 - - - - myozenin 1 [Source:HGNC Symbol;Acc:HGNC:13752]
36. GPX2 ENSGALG00000042031 4 0.92 - - - - - 0.920 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
37. DMC1 ENSGALG00000012236 1 0.92 - - - - - 0.920 - - - - DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]
38. TLR3 ENSGALG00000013468 35 0.92 - - - - - 0.920 - - - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
39. ADCYAP1 ENSGALG00000014858 9 0.92 - - - - - 0.920 - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
40. KLHL23 ENSGALG00000020737 13 0.92 - - 0.920 - - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
41. UCP3 ENSGALG00000017316 30 0.92 - - - - - 0.920 - - - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
42. GNIH GNIH 8 0.92 - - - - - 0.920 - - - -
43. SAMD10 ENSGALG00000006007 15 0.92 - - - - - 0.920 - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
44. WISP2 ENSGALG00000004154 4 0.92 - - - - - 0.920 - - - - WNT1 inducible signaling pathway protein 2 [Source:HGNC Symbol;Acc:HGNC:12770]
45. MREG ENSGALG00000003758 3 0.92 - - - - - 0.920 - - - - melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
46. AMMECR1 ENSGALG00000008074 5 0.92 - - - - - 0.920 - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
47. BLK ENSGALG00000016661 68 0.92 - - - - - 0.920 - - - - BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
48. ENSGALG00000027385 ENSGALG00000027385 1 0.92 - - - - - 0.920 - - - -
49. KCNV1 ENSGALG00000031449 64 0.92 - - - - - 0.920 - - - - potassium voltage-gated channel modifier subfamily V member 1
50. SHROOM4 ENSGALG00000033953 3 0.92 - - - - - 0.920 - - - - shroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]
51. ENSGALG00000016572 ENSGALG00000016572 79 0.92 - - - - - 0.920 - - - -
52. TBXAS1 ENSGALG00000012791 2 0.92 - - - - - 0.920 - - - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
53. MTM1 ENSGALG00000009096 22 0.92 - - - - - 0.920 - - - - myotubularin 1 [Source:HGNC Symbol;Acc:HGNC:7448]
54. UIMC1 ENSGALG00000001158 22 0.914 - - - - - 0.914 - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
55. AGBL2 ENSGALG00000029618 8 0.909 - - 0.909 - - - - - - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
56. NSUN6 ENSGALG00000008564 9 0.907 - - 0.907 - - - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
57. PNPLA2 ENSGALG00000014569 7 0.907 - - 0.907 - - - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]
58. ENSGALG00000028038 ENSGALG00000028038 9 0.907 - - 0.907 - - - - - - -
59. ENSGALG00000017269 ENSGALG00000017269 13 0.906 - - 0.906 - - - - - - -
60. SGIP1 ENSGALG00000011113 20 0.905 - - - - - - - 0.905 - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
61. SOBP ENSGALG00000043047 147 0.905 - - - - - 0.905 - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
62. BRINP3 ENSGALG00000033407 40 0.904 - - - - - 0.904 - - - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
63. GTPBP8 ENSGALG00000015190 21 0.904 - - 0.904 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
64. CPAMD8 ENSGALG00000003742 151 0.904 - - - - - - - 0.904 - - C3 and PZP like, alpha-2-macroglobulin domain containing 8, transcript variant X3
65. ASTL ENSGALG00000037220 2775 0.901 - - 0.901 - - - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
66. TSPAN14 ENSGALG00000002414 69 0.9 - - - - - - - 0.900 - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
67. NFAT5 ENSGALG00000039300 29 0.9 - - - - - 0.900 - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
68. LAMP1 ENSGALG00000037697 247 0.9 - - - - - - - 0.900 - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
69. MTMR3 ENSGALG00000008051 9 0.899 - - 0.899 - - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
70. FBXO16 7 0.897 - - 0.897 - - - - - - - F-box protein 16, transcript variant X1
71. ERC2 ENSGALG00000005419 24 0.896 - - - - - 0.896 - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
72. CCDC30 15 0.895 - - 0.895 - - - - - - - coiled-coil domain containing 30, transcript variant X4
73. ZDHHC15 ENSGALG00000007800 24 0.895 - - 0.895 - - - - - - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
74. NMRAL1 ENSGALG00000029820 29 0.894 - - 0.894 - - - - - - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
75. ENSGALG00000017013 ENSGALG00000017013 286 0.893 - - - - - - - 0.893 - -
76. KANSL1L ENSGALG00000002866 44 0.892 - - 0.892 - - - - - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
77. ENSGALG00000019896 ENSGALG00000019896 3 0.892 - - - - - - - 0.892 - -
78. PRLR ENSGALG00000003446 19 0.888 - - 0.888 - - - - - - - prolactin receptor [Source:NCBI gene;Acc:395660]
79. HERPUD1 ENSGALG00000001220 18 0.888 - - 0.888 - - - - - - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
80. NFXL1 ENSGALG00000014138 36 0.887 - - 0.887 - - - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
81. RGMB ENSGALG00000015284 14 0.887 - - 0.887 - - - - - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
82. SVOPL ENSGALG00000012812 27 0.886 - - 0.886 - - - - - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
83. C4orf48 C4orf48 255 0.884 - - - - - - - 0.884 - -
84. OGDH ENSGALG00000014155 441 0.879 - - - - - - 0.879 - - - oxoglutarate dehydrogenase [Source:NCBI gene;Acc:426429]
85. PDE1C ENSGALG00000039935 16 0.879 - - 0.879 - - - - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
86. FAM69A ENSGALG00000005918 157 0.878 - - 0.878 - - - - - - - family with sequence similarity 69 member A, transcript variant X4
87. TTC18 TTC18 139 0.878 - - - - - - - 0.878 - -
88. LRRN4 ENSGALG00000008815 481 0.877 - - 0.877 - - - - - - - leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
89. ADAMTS15 ENSGALG00000001407 11 0.875 - - 0.875 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
90. CHADL ENSGALG00000011970 42 0.874 - - - - - - - 0.874 - - chondroadherin-like [Source:NCBI gene;Acc:417998]
91. HPCAL4 ENSGALG00000003829 75 0.873 - - - - - - - 0.873 - - hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]
92. CASP18 ENSGALG00000008346 23 0.872 - - - - - - - 0.872 - - initiator caspase [Source:NCBI gene;Acc:693266]
93. AKAP6 ENSGALG00000009995 77 0.871 - - 0.871 - - - - - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
94. RNASET2 ENSGALG00000011426 40 0.871 - - 0.871 - - - - - - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
95. STAG3 STAG3 34 0.87 - - 0.870 - - - - - - -
96. BLVRA ENSGALG00000031786 23 0.869 - - 0.869 - - - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
97. ENSGALG00000027352 ENSGALG00000027352 69 0.868 - - 0.868 - - - - - - -
98. DRD4 ENSGALG00000040761 79 0.864 - - 0.864 - - - - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
99. C12ORF32 C12ORF32 768 0.863 - - - - - 0.863 - - - -
100. SLITRK2 ENSGALG00000009192 51 0.862 - - 0.862 - - - - - - - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]

There are 213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA