Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIT1

Gene Name Gene ID Reads Annotation
TRIT1 ENSGALG00000003851 1518 tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]











Genes with expression patterns similar to TRIT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIT1 ENSGALG00000003851 1518 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
2. ENSGALG00000004703 ENSGALG00000004703 112 1.674 - - 0.924 - - - 0.750 - - -
3. SGCE ENSGALG00000009670 3070 1.67 - - 0.888 - - - - - 0.782 - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
4. AGFG1 ENSGALG00000003052 4766 1.64 - - 0.799 - - - - - 0.841 - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
5. IFT81 ENSGALG00000003854 2534 1.626 - - 0.924 - - - - - 0.702 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
6. GGT7 ENSGALG00000001062 476 1.61 - - 0.902 - - - 0.708 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
7. ZDHHC7 ENSGALG00000042522 1774 1.592 - - 0.838 - - - 0.754 - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
8. ACOX1 ENSGALG00000002159 2953 1.568 - - 0.837 - - - 0.731 - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
9. SENP6 ENSGALG00000015901 8013 1.555 - - 0.852 - - - 0.703 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
10. METTL5 ENSGALG00000009676 3252 1.522 - - 0.789 - - - - - 0.733 - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
11. GID8 ENSGALG00000005700 3992 1.479 - - 0.741 - - - - - 0.738 - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
12. CUL5 ENSGALG00000017165 2480 0.935 - - 0.935 - - - - - - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
13. IQCD ENSGALG00000037307 642 0.931 - - 0.931 - - - - - - - IQ motif containing D, transcript variant X2
14. UEVLD ENSGALG00000006342 164 0.929 - - 0.929 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
15. ITM2B ENSGALG00000016996 1112 0.929 - - 0.929 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
16. WDR92 ENSGALG00000008760 3934 0.929 - - 0.929 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
17. ARRDC4 ENSGALG00000007012 1039 0.929 - - 0.929 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
18. TDRD6 48 0.928 - - 0.928 - - - - - - - tudor domain containing 6
19. ITGB4 ENSGALG00000002389 44 0.928 - - 0.928 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
20. DBN1 ENSGALG00000033405 216 0.928 - - 0.928 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
21. MRC2 ENSGALG00000000461 48 0.928 - - 0.928 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
22. ENSGALG00000028964 ENSGALG00000028964 46 0.928 - - 0.928 - - - - - - -
23. FBXL5 ENSGALG00000014510 245 0.927 - - 0.927 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
24. RECQL ENSGALG00000013174 1323 0.927 - - 0.927 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
25. CDC14B ENSGALG00000012627 110 0.927 - - 0.927 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
26. SZT2 ENSGALG00000028561 255 0.926 - - 0.926 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
27. RQCD1 RQCD1 110 0.926 - - 0.926 - - - - - - -
28. MED12 ENSGALG00000036322 814 0.926 - - 0.926 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
29. SLC3A1 ENSGALG00000009973 608 0.926 - - 0.926 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
30. AKAP10 ENSGALG00000004679 103 0.926 - - 0.926 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
31. GDPD4 ENSGALG00000000690 824 0.926 - - 0.926 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
32. OSGIN2 ENSGALG00000042840 83 0.926 - - 0.926 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
33. ENSGALG00000002020 ENSGALG00000002020 183 0.925 - - 0.925 - - - - - - -
34. TCTN2 ENSGALG00000023683 3596 0.925 - - 0.925 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
35. CHAMP1 ENSGALG00000016813 508 0.925 - - 0.925 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
36. GTF2H2 ENSGALG00000002399 2361 0.924 - - 0.924 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
37. N4BP2L2 857 0.924 - - 0.924 - - - - - - - NEDD4 binding protein 2 like 2, transcript variant X7
38. U4 U4 69 0.924 - - 0.924 - - - - - - -
39. WHSC1 1712 0.923 - - 0.923 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
40. LRRC71 ENSGALG00000027351 695 0.923 - - 0.923 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
41. PCYT1B 190 0.923 - - 0.923 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
42. PRUNE PRUNE 452 0.922 - - 0.922 - - - - - - -
43. ERCC3 ENSGALG00000011515 3133 0.922 - - 0.922 - - - - - - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
44. ENSGALG00000020103 ENSGALG00000020103 64 0.922 - - 0.922 - - - - - - -
45. L3MBTL3 ENSGALG00000034030 113 0.922 - - 0.922 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
46. F2R ENSGALG00000014983 106 0.922 - - 0.922 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
47. PTDSS2 ENSGALG00000004300 682 0.922 - - 0.922 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
48. NXPE3 ENSGALG00000015344 111 0.922 - - 0.922 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
49. TRIM13 ENSGALG00000017011 92 0.921 - - 0.921 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
50. SOBP ENSGALG00000043047 147 0.921 - - 0.921 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
51. CLEC16A ENSGALG00000007167 66 0.921 - - 0.921 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
52. RFK ENSGALG00000033558 1364 0.918 - - 0.918 - - - - - - - riboflavin kinase, transcript variant X3
53. APTX ENSGALG00000001954 692 0.917 - - 0.917 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
54. TTPAL ENSGALG00000004244 2734 0.917 - - 0.917 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
55. TMEM242 ENSGALG00000013689 377 0.916 - - 0.916 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
56. LRRC42 ENSGALG00000010743 384 0.916 - - 0.916 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
57. RPS6KB1 ENSGALG00000005198 169 0.916 - - 0.916 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
58. FAM134C 860 0.915 - - 0.915 - - - - - - - family with sequence similarity 134 member C
59. GFER ENSGALG00000005579 1367 0.915 - - 0.915 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
60. SPG11 ENSGALG00000008180 1890 0.915 - - 0.915 - - - - - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
61. UBR2 ENSGALG00000009906 7717 0.915 - - 0.915 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
62. BBS5 ENSGALG00000009846 344 0.915 - - 0.915 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
63. ABCC3 ENSGALG00000007522 340 0.914 - - 0.914 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
64. RAD54L2 ENSGALG00000003243 187 0.914 - - 0.914 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
65. SMARCAD1 ENSGALG00000037339 149 0.913 - - 0.913 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
66. ATP8B4 ENSGALG00000002326 456 0.912 - - 0.912 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
67. TUBGCP3 ENSGALG00000016836 332 0.912 - - 0.912 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
68. GON4L ENSGALG00000014643 1737 0.912 - - 0.912 - - - - - - - gon-4 like, transcript variant X2
69. KCTD3 ENSGALG00000009678 335 0.911 - - 0.911 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
70. LACE1 LACE1 74 0.911 - - - - - - - - 0.911 -
71. NGF ENSGALG00000002556 122 0.911 - - 0.911 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
72. LXR LXR 2599 0.911 - - 0.911 - - - - - - -
73. MLLT3 ENSGALG00000015078 502 0.91 - - 0.910 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
74. ELOVL5 ENSGALG00000016314 18163 0.91 - - 0.910 - - - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
75. NACAD 679 0.91 - - 0.910 - - - - - - - NAC alpha domain containing, transcript variant X1
76. ATF7IP ENSGALG00000011814 1571 0.91 - - 0.910 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
77. TMEM167A ENSGALG00000027332 13862 0.91 - - 0.910 - - - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
78. ADK ENSGALG00000005057 199 0.91 - - 0.910 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
79. TMEM8A ENSGALG00000026188 3092 0.909 - - 0.909 - - - - - - - transmembrane protein 8A [Source:HGNC Symbol;Acc:HGNC:17205]
80. CHGA ENSGALG00000010820 1028 0.908 - - 0.908 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
81. ATP10D ENSGALG00000014192 94 0.908 - - 0.908 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
82. RALGAPA2 240 0.908 - - 0.908 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
83. C18orf8 C18orf8 1512 0.906 - - 0.906 - - - - - - -
84. CEP104 ENSGALG00000000978 1130 0.906 - - 0.906 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
85. WAPAL WAPAL 625 0.906 - - 0.906 - - - - - - -
86. RRN3 ENSGALG00000041989 3934 0.905 - - 0.905 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
87. AKT3 ENSGALG00000034081 866 0.905 - - 0.905 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
88. REXO2 ENSGALG00000035980 16319 0.904 - - 0.904 - - - - - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
89. ZNF639 ENSGALG00000005944 6387 0.904 - - 0.904 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
90. AASDHPPT ENSGALG00000027981 1017 0.903 - - 0.903 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
91. BBX ENSGALG00000015353 1281 0.902 - - 0.902 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
92. TUBA4A ENSGALG00000000433 1367 0.902 - - 0.902 - - - - - - - tubulin alpha 4a
93. MTHFSD ENSGALG00000033322 824 0.902 - - 0.902 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
94. PRMT7 ENSGALG00000038865 2666 0.902 - - 0.902 - - - - - - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
95. GTF2E1 ENSGALG00000042320 7712 0.902 - - 0.902 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
96. SMOC2 ENSGALG00000011205 340 0.9 - - 0.900 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
97. ATP6V0A2 ENSGALG00000003194 4824 0.9 - - 0.900 - - - - - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
98. SETD1B ENSGALG00000004324 2897 0.9 - - 0.900 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
99. SESN1 ENSGALG00000015286 2387 0.899 - - 0.899 - - - - - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
100. ABCE1 ENSGALG00000009961 958 0.899 - - 0.899 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]

There are 662 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA