Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TNRC18

Gene Name Gene ID Reads Annotation
TNRC18 ENSGALG00000040770 4061 trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]











Genes with expression patterns similar to TNRC18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNRC18 ENSGALG00000040770 4061 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
2. SH3BGRL3 ENSGALG00000038536 18187 1.793 - - - - - - 0.857 0.936 - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
3. SKP2 ENSGALG00000003547 14637 1.714 - - - - - - 0.776 0.938 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
4. PSMG1 ENSGALG00000016062 7511 1.709 - - - - - - 0.716 0.993 - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
5. JMJD1C ENSGALG00000002942 4556 1.707 - - - - - - 0.714 0.993 - - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
6. FBXO5 ENSGALG00000013607 6156 1.694 - - - - - - 0.701 0.993 - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
7. SPARC ENSGALG00000004184 36410 1.671 - - - - - - 0.752 0.919 - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
8. TTC4 10377 1.662 - - - - - - 0.722 0.940 - - tetratricopeptide repeat domain 4
9. C4H4ORF52 C4H4ORF52 8116 1.58 - - - - - - 0.743 0.837 - -
10. LSM6 ENSGALG00000009985 18582 1.573 - - - - - - 0.753 0.820 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
11. TRAPPC2 ENSGALG00000016578 8749 1.513 - - - - - - 0.748 0.765 - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
12. ASUN ASUN 17129 1.496 - - - - - - 0.705 0.791 - -
13. CDH11 ENSGALG00000039985 18212 1.464 - - 0.728 - - - 0.736 - - - cadherin 11 [Source:NCBI gene;Acc:415797]
14. LARP1B ENSGALG00000010207 2935 0.995 - - - - - - - 0.995 - - La ribonucleoprotein domain family member 1B [Source:HGNC Symbol;Acc:HGNC:24704]
15. SAFB ENSGALG00000013365 3175 0.995 - - - - - - - 0.995 - - scaffold attachment factor B, transcript variant X1
16. Sep-11 Sep-11 2005 0.995 - - - - - - - 0.995 - -
17. DDX55 ENSGALG00000003298 2315 0.995 - - - - - - - 0.995 - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
18. RPTOR ENSGALG00000034210 982 0.995 - - - - - - - 0.995 - - regulatory associated protein of MTOR complex 1 [Source:HGNC Symbol;Acc:HGNC:30287]
19. ADAM9 ENSGALG00000003398 1299 0.995 - - - - - - - 0.995 - - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
20. PRMT7 ENSGALG00000038865 2666 0.995 - - - - - - - 0.995 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
21. TBC1D12 ENSGALG00000034044 5588 0.995 - - - - - - - 0.995 - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
22. GPR89 GPR89 2253 0.995 - - - - - - - 0.995 - -
23. MTMR6 ENSGALG00000017112 2214 0.995 - - - - - - - 0.995 - - myotubularin related protein 6 [Source:HGNC Symbol;Acc:HGNC:7453]
24. EXTL3 ENSGALG00000016630 1916 0.995 - - - - - - - 0.995 - - exostosin like glycosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:3518]
25. GOLGA2 ENSGALG00000004881 677 0.995 - - - - - - - 0.995 - - golgin A2, transcript variant X7
26. MBTPS1 ENSGALG00000003293 4843 0.995 - - - - - - - 0.995 - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
27. ORC2 ENSGALG00000008234 3361 0.995 - - - - - - - 0.995 - - origin recognition complex subunit 2 [Source:NCBI gene;Acc:424077]
28. ENGASE ENSGALG00000011816 1763 0.995 - - - - - - - 0.995 - - endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
29. ESF1 ENSGALG00000034768 8610 0.994 - - - - - - - 0.994 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
30. NOP14 ENSGALG00000015649 7039 0.994 - - - - - - - 0.994 - - NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]
31. DISP1 3281 0.994 - - - - - - - 0.994 - - dispatched RND transporter family member 1, transcript variant X3
32. BAG2 ENSGALG00000026605 3898 0.994 - - - - - - - 0.994 - - BCL2 associated athanogene 2
33. CASC4 ENSGALG00000008208 8338 0.994 - - - - - - - 0.994 - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
34. LSM1 ENSGALG00000003245 4701 0.994 - - - - - - - 0.994 - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
35. PSMD5 ENSGALG00000001637 6812 0.993 - - - - - - - 0.993 - - proteasome 26S subunit, non-ATPase 5 [Source:NCBI gene;Acc:417125]
36. HIGD2A ENSGALG00000003348 34109 0.992 - - - - - - - 0.992 - - HIG1 hypoxia inducible domain family member 2A
37. NUDC ENSGALG00000000895 17844 0.992 - - - - - - - 0.992 - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
38. CCNYL1 ENSGALG00000008485 11958 0.99 - - - - - - - 0.990 - - cyclin Y like 1
39. CTPS1 ENSGALG00000042967 9532 0.99 - - - - - - - 0.990 - - CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
40. KDM2B ENSGALG00000004225 11513 0.989 - - - - - - - 0.989 - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
41. PARP16 ENSGALG00000007365 9467 0.985 - - - - - - - 0.985 - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
42. DAK DAK 13208 0.982 - - - - - - - 0.982 - -
43. ACO1 ENSGALG00000002162 6645 0.981 - - - - - - - 0.981 - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
44. CDH5 ENSGALG00000032349 8526 0.978 - - - - - - - 0.978 - - cadherin 5 [Source:NCBI gene;Acc:374068]
45. MCM5 ENSGALG00000012546 18254 0.97 - - - - - - - 0.970 - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
46. CTNND2 ENSGALG00000013001 11217 0.965 - - - - - - - 0.965 - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
47. FKBP9 ENSGALG00000037669 12079 0.957 - - - - - - - 0.957 - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
48. SRSF6 ENSGALG00000000990 12424 0.955 - - - - - - - 0.955 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
49. BCCIP ENSGALG00000006617 13291 0.953 - - - - - - - 0.953 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
50. DTD1 ENSGALG00000008808 10807 0.95 - - - - - - - 0.950 - - D-tyrosyl-tRNA deacylase 1 [Source:NCBI gene;Acc:416726]
51. THOC5 ENSGALG00000029223 16069 0.944 - - - - - - - 0.944 - - THO complex 5 [Source:NCBI gene;Acc:417019]
52. EIF2B1 ENSGALG00000003259 9491 0.938 - - - - - - - 0.938 - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
53. TAF3 ENSGALG00000006731 15569 0.929 - - - - - - - 0.929 - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
54. ATP1A1 ENSGALG00000032247 15898 0.926 - - - - - - - 0.926 - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
55. PARL ENSGALG00000002315 15943 0.923 - - - - - - - 0.923 - - presenilin associated rhomboid like
56. LSM7 ENSGALG00000000408 19112 0.916 - - - - - - - 0.916 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
57. TM9SF3 ENSGALG00000005534 15290 0.914 - - - - - - - 0.914 - - transmembrane 9 superfamily member 3
58. HDAC2 ENSGALG00000014991 23458 0.902 - - - - - - - 0.902 - - histone deacetylase 2 [Source:NCBI gene;Acc:395635]
59. COPS5 ENSGALG00000030843 11942 0.899 - - - - - - - 0.899 - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
60. MPHOSPH10 ENSGALG00000003906 7029 0.886 - - - - - - - 0.886 - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
61. RNF7 ENSGALG00000021117 13110 0.881 - - - - - - - 0.881 - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
62. SLC25A30 ENSGALG00000016979 2625 0.866 - - - - - - - 0.866 - - solute carrier family 25 member 30 [Source:HGNC Symbol;Acc:HGNC:27371]
63. GMPPA ENSGALG00000002417 10383 0.861 - - - - - - - 0.861 - - GDP-mannose pyrophosphorylase A, transcript variant X2
64. HNRNPH3 ENSGALG00000003947 28724 0.859 - - - - - - - 0.859 - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
65. FAF2 ENSGALG00000003331 4776 0.857 - - - - - - - 0.857 - - Fas associated factor family member 2 [Source:HGNC Symbol;Acc:HGNC:24666]
66. METRNL ENSGALG00000028354 25565 0.855 - - - - - - - 0.855 - - meteorin like, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:27584]
67. TRAM1 ENSGALG00000041112 22876 0.855 - - - - - - - 0.855 - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
68. COL5A2 ENSGALG00000031112 18358 0.85 - - - - - - 0.850 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
69. C2orf47 C2orf47 17769 0.85 - - - - - - - 0.850 - -
70. LAP3 ENSGALG00000006334 21076 0.849 - - - - - - - 0.849 - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
71. PGRMC1 ENSGALG00000020260 19059 0.847 - - - - - - - 0.847 - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
72. TMED2 ENSGALG00000003307 20704 0.846 - - - - - - 0.846 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
73. C1orf174 ENSGALG00000000975 4947 0.839 - - - - - - - 0.839 - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
74. TMEM115 ENSGALG00000026965 13050 0.838 - - - - - - - 0.838 - - transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
75. CTSO ENSGALG00000009373 4186 0.836 - - - - - - - 0.836 - - cathepsin O [Source:NCBI gene;Acc:422410]
76. DERL1 ENSGALG00000033950 15074 0.836 - - - - - - 0.836 - - - derlin 1 [Source:NCBI gene;Acc:420350]
77. TRIP13 ENSGALG00000033834 6590 0.831 - - - - - - - 0.831 - - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
78. LIMS1 ENSGALG00000029970 7244 0.822 - - - - - - 0.822 - - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
79. FKBP7 ENSGALG00000009149 6742 0.822 - - - - - - 0.822 - - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
80. UMPS ENSGALG00000011770 11331 0.82 - - - - - - 0.820 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
81. MED14 ENSGALG00000016238 4685 0.819 - - - - - - 0.819 - - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
82. GOLGA7 ENSGALG00000003483 26525 0.819 - - - - - - - 0.819 - - golgin A7 [Source:NCBI gene;Acc:426787]
83. MOCS2 ENSGALG00000014906 4974 0.817 - - - - - - 0.817 - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
84. EHD3 ENSGALG00000009086 14407 0.816 - - - - - - 0.816 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
85. RIOK2 ENSGALG00000015288 6280 0.814 - - - - - - 0.814 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
86. ZC3H14 ENSGALG00000010622 7024 0.813 - - - - - - - 0.813 - - zinc finger CCCH-type containing 14 [Source:NCBI gene;Acc:423399]
87. RABGGTB ENSGALG00000011388 11654 0.812 - - - - - - 0.812 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
88. NCOA2 ENSGALG00000036017 256 0.81 - - 0.810 - - - - - - - nuclear receptor coactivator 2, transcript variant X9
89. GLO1 ENSGALG00000010127 31662 0.809 - - - - - - 0.809 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
90. PHLDB2 ENSGALG00000015377 8560 0.809 - - - - - - 0.809 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
91. GPRC5C ENSGALG00000021362 3712 0.809 - - - - - - 0.809 - - - G protein-coupled receptor class C group 5 member C [Source:HGNC Symbol;Acc:HGNC:13309]
92. GTF2E2 ENSGALG00000010283 3936 0.808 - - - - - - 0.808 - - - general transcription factor IIE subunit 2 [Source:NCBI gene;Acc:771227]
93. API5 ENSGALG00000037968 18265 0.807 - - - - - - 0.807 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
94. ATG3 ENSGALG00000015204 11277 0.807 - - - - - - 0.807 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
95. BTF3 ENSGALG00000013512 33962 0.806 - - - - - - - 0.806 - - basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
96. GPALPP1 ENSGALG00000031567 4221 0.804 - - - - - - 0.804 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
97. N-RAS N-RAS 5787 0.802 - - - - - - 0.802 - - -
98. PLEKHB2 ENSGALG00000002169 3832 0.802 - - - - - - 0.802 - - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
99. NOC4L ENSGALG00000002272 9644 0.801 - - - - - - 0.801 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
100. BET1L ENSGALG00000004172 5305 0.798 - - - - - - 0.798 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]

There are 347 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA