Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMC1

Gene Name Gene ID Reads Annotation
TMC1 ENSGALG00000015145 1180 transmembrane channel like 1 [Source:NCBI gene;Acc:427255]











Genes with expression patterns similar to TMC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMC1 ENSGALG00000015145 1180 6 - - 1.000 1.000 - 1.000 1.000 1.000 - 1.000 transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
2. BMP3 ENSGALG00000035052 3260 1 - - - - - - 1.000 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
3. EGFLAM ENSGALG00000003726 4588 1 - - - - - - 1.000 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
4. ABCC10 2213 1 - - - - - - 1.000 - - - ATP binding cassette subfamily C member 10, transcript variant X10
5. TMEM97 ENSGALG00000005702 2037 1 - - - - - - 1.000 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
6. ENSGALG00000014190 ENSGALG00000014190 5735 1 - - - - - - 1.000 - - -
7. CTU2 4818 1 - - - - - - 1.000 - - - cytosolic thiouridylase subunit 2, transcript variant X3
8. TMEM62 ENSGALG00000009260 1170 1 - - - - - - 1.000 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
9. PTBP2 ENSGALG00000005552 3443 1 - - - - - - 1.000 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
10. CAND1 4541 1 - - - - - - 1.000 - - - cullin associated and neddylation dissociated 1
11. TMEM120B ENSGALG00000004254 2819 1 - - - - - - 1.000 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
12. MRPL32 ENSGALG00000037258 6861 0.999 - - - - - - 0.999 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
13. POLR1C ENSGALG00000010349 7059 0.999 - - - - - - 0.999 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
14. GNPDA1 ENSGALG00000040594 13 0.999 - - - - - - - 0.999 - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
15. M6PR ENSGALG00000031681 9442 0.999 - - - - - - 0.999 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
16. HOXD8 ENSGALG00000037272 4338 0.998 - - - - - - 0.998 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
17. MOB3A ENSGALG00000031729 9690 0.997 - - - - - - 0.997 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
18. ENSGALG00000004773 ENSGALG00000004773 10418 0.997 - - - - - - 0.997 - - -
19. IMP4 ENSGALG00000029152 11669 0.996 - - - - - - 0.996 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
20. PHGDH ENSGALG00000002988 6912 0.996 - - - - - - 0.996 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
21. EIF3J ENSGALG00000008187 43570 0.994 - - - - - - 0.994 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
22. POLR2D ENSGALG00000002057 14548 0.993 - - - - - - 0.993 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
23. MCM2 ENSGALG00000006037 13458 0.993 - - - - - - 0.993 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
24. GLB1 ENSGALG00000040028 207 0.992 - - - - - - - 0.992 - - galactosidase beta 1 [Source:NCBI gene;Acc:420720]
25. CHNTHL1 CHNTHL1 4976 0.992 - - - - - - 0.992 - - -
26. ITGA1 ENSGALG00000014891 11378 0.991 - - - - - - 0.991 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
27. PRDX6 ENSGALG00000003053 17928 0.99 - - - - - - 0.990 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
28. PFDN4 ENSGALG00000007792 26514 0.99 - - - - - - 0.990 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
29. DDX21 ENSGALG00000004144 13105 0.988 - - - - - - 0.988 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
30. FAM103A1 17380 0.987 - - - - - - 0.987 - - - family with sequence similarity 103 member A1, transcript variant X2
31. FBN3 ENSGALG00000037625 23313 0.986 - - - - - - 0.986 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
32. DYNLL2 ENSGALG00000005522 17107 0.985 - - - - - - 0.985 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
33. ATP5MC1 ENSGALG00000001330 37766 0.984 - - - - - - 0.984 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
34. SMC2 ENSGALG00000015691 34013 0.978 - - - - - - 0.978 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
35. NR4A2 ENSGALG00000012538 29 0.977 - - - - - - - 0.977 - - nuclear receptor subfamily 4 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7981]
36. DENR ENSGALG00000003795 30805 0.974 - - - - - - 0.974 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
37. MBTD1 ENSGALG00000002954 254 0.971 - - - - - - - 0.971 - - mbt domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19866]
38. ATMIN ENSGALG00000040475 16 0.968 - - - - - - - 0.968 - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
39. RNaseP RNaseP 30 0.968 - - - - - - - 0.968 - -
40. HFM1 ENSGALG00000006091 5 0.968 - - - - - - - 0.968 - - HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
41. IL1RAP ENSGALG00000007253 6 0.968 - - - - - - - 0.968 - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
42. EFCAB4A EFCAB4A 12 0.968 - - - - - - - 0.968 - -
43. GPRC5B ENSGALG00000002028 28 0.968 - - - - - - - 0.968 - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
44. ENSGALG00000019672 ENSGALG00000019672 18 0.968 - - - - - - - 0.968 - -
45. ST8SIA6 ENSGALG00000008671 8 0.968 - - - - - - - 0.968 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
46. ENSGALG00000002493 ENSGALG00000002493 2 0.968 - - - - - - - 0.968 - -
47. NDST4 ENSGALG00000012015 43 0.968 - - - - - - - 0.968 - - N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]
48. TSNAXIP1 ENSGALG00000001533 9 0.968 - - - - - - - 0.968 - - translin associated factor X interacting protein 1, transcript variant X2
49. CBL ENSGALG00000029077 6 0.968 - - - - - - - 0.968 - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
50. GNB4 ENSGALG00000008983 26 0.968 - - - - - - - 0.968 - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
51. ARNTL ENSGALG00000005378 19 0.967 - - - - - - - 0.967 - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
52. DENND4C ENSGALG00000015083 25 0.967 - - - - - - - 0.967 - - DENN domain containing 4C [Source:HGNC Symbol;Acc:HGNC:26079]
53. SLC40A1 ENSGALG00000043618 16 0.963 - - - - - - - 0.963 - - solute carrier family 40 member 1 [Source:NCBI gene;Acc:423984]
54. REG4 ENSGALG00000002931 4 0.963 - - - - - - - 0.963 - - regenerating family member 4 [Source:NCBI gene;Acc:424379]
55. ZNF516 ENSGALG00000013660 34 0.96 - - - - - - - 0.960 - - zinc finger protein 516 [Source:HGNC Symbol;Acc:HGNC:28990]
56. ZNF770 ENSGALG00000009817 27 0.957 - - - - - - - 0.957 - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
57. AFF4 ENSGALG00000030147 56 0.95 - - - - - - - 0.950 - - AF4/FMR2 family member 4 [Source:HGNC Symbol;Acc:HGNC:17869]
58. ALDH1A2 ENSGALG00000004270 49483 0.945 - - - - - - 0.945 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
59. DNAJC13 ENSGALG00000035068 180 0.937 - - - - - - - 0.937 - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
60. TPTE2 ENSGALG00000017031 29 0.937 - - - - - - - 0.937 - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
61. SLC45A3 ENSGALG00000000703 85 0.931 - - - - - - - 0.931 - - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
62. SASH3 ENSGALG00000032530 126 0.926 - - - - - - - 0.926 - - SAM and SH3 domain containing 3 [Source:NCBI gene;Acc:422138]
63. CALM_1 CALM_1 57812 0.921 - - - - - - 0.921 - - -
64. ATP2A2 ENSGALG00000032287 12734 0.919 - - - - - - 0.919 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
65. BLNK ENSGALG00000006973 85 0.915 - - - - - - - 0.915 - - B cell linker [Source:NCBI gene;Acc:395733]
66. BTBD19 ENSGALG00000028978 20 0.902 - - - - - - - 0.902 - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
67. LOC415324 ENSGALG00000002097 17 0.893 - - - - - - - 0.893 - - epididymal protein-like, transcript variant X16
68. ENSGALG00000013318 ENSGALG00000013318 8 0.893 - - - - - - - 0.893 - -
69. PNKD ENSGALG00000022166 595 0.892 - - - - - - - 0.892 - - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
70. LY75 ENSGALG00000011153 76 0.892 - - - - - - - 0.892 - - lymphocyte antigen 75 [Source:NCBI gene;Acc:424192]
71. UQCRFS1 ENSGALG00000025819 66637 0.889 - - - - - - 0.889 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
72. SGCD ENSGALG00000003886 27 0.885 - - - - - - - 0.885 - - sarcoglycan delta [Source:HGNC Symbol;Acc:HGNC:10807]
73. ENSGALG00000021344 ENSGALG00000021344 50 0.883 - - - - - - - 0.883 - -
74. SUB1L1 ENSGALG00000027147 73 0.877 - - - - - - - 0.877 - - SUB1 homolog (S. cerevisiae)-like 1
75. ERN1 ENSGALG00000003476 4 0.868 - - - - - - - 0.868 - - endoplasmic reticulum to nucleus signaling 1 [Source:NCBI gene;Acc:417414]
76. FOXP1 127 0.867 - - - - - 0.867 - - - - forkhead box P1, transcript variant X14
77. TRPC2L ENSGALG00000017493 28 0.861 - - 0.861 - - - - - - - Putative short transient receptor potential channel 2-like protein
78. PLEKHA6 ENSGALG00000038399 182 0.855 - - 0.855 - - - - - - - pleckstrin homology domain containing A6 [Source:HGNC Symbol;Acc:HGNC:17053]
79. PARVB ENSGALG00000014201 27559 0.854 - - - - - - 0.854 - - - parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
80. COASY ENSGALG00000028866 41 0.847 - - - - - - - 0.847 - - Coenzyme A synthase [Source:HGNC Symbol;Acc:HGNC:29932]
81. IFITM3_1 ENSGALG00000026970 14 0.845 - - - - - - - 0.845 - - Gallus gallus interferon-induced transmembrane protein 3 (IFITM3), mRNA. [Source:RefSeq mRNA;Acc:NM_001350061]
82. FAM105B 56 0.843 - - - - - 0.843 - - - - family with sequence similarity 105, member B, transcript variant X18
83. TUB ENSGALG00000005986 85 0.837 - - 0.837 - - - - - - - tubby bipartite transcription factor [Source:HGNC Symbol;Acc:HGNC:12406]
84. KCNC2 ENSGALG00000010204 3 0.83 - - - 0.830 - - - - - - potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]
85. ENTPD1 ENSGALG00000007078 5 0.83 - - - 0.830 - - - - - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:NCBI gene;Acc:423826]
86. ENSGALG00000022884 ENSGALG00000022884 2 0.83 - - - 0.830 - - - - - -
87. PAR2L ENSGALG00000002570 3 0.83 - - - 0.830 - - - - - - proteinase-activated receptor 2-like
88. ENSGALG00000027367 ENSGALG00000027367 7 0.83 - - - 0.830 - - - - - -
89. TIE1 ENSGALG00000009957 97 0.83 - - - 0.830 - - - - - - tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]
90. COL11A1 ENSGALG00000005180 244 0.826 - - - - - - - 0.826 - - collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
91. CHERP ENSGALG00000003824 11489 0.823 - - - - - - 0.823 - - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
92. POLR2E ENSGALG00000002591 26405 0.823 - - - - - - 0.823 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
93. SUSD4 ENSGALG00000009388 48 0.819 - - - - - - - 0.819 - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
94. CD36 ENSGALG00000008439 18 0.816 - - - - - - - 0.816 - - CD36 molecule [Source:NCBI gene;Acc:417730]
95. TMEM230 ENSGALG00000036876 55 0.815 - - - - - - - 0.815 - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
96. ACER2 ENSGALG00000015081 18 0.81 - - - 0.810 - - - - - - alkaline ceramidase 2 [Source:HGNC Symbol;Acc:HGNC:23675]
97. KIAA0226L KIAA0226L 95 0.808 - - - 0.808 - - - - - -
98. UBE2Z ENSGALG00000001315 103 0.808 - - - - - - - 0.808 - - ubiquitin conjugating enzyme E2 Z [Source:HGNC Symbol;Acc:HGNC:25847]
99. IMPDH2 ENSGALG00000006910 77 0.807 - - - 0.807 - - - - - - inosine monophosphate dehydrogenase 2 [Source:NCBI gene;Acc:416058]
100. ENSGALG00000001483 ENSGALG00000001483 215 0.804 - - - 0.804 - - - - - -

There are 74 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA