Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TCOF1

Gene Name Gene ID Reads Annotation
TCOF1 ENSGALG00000005535 24554 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]











Genes with expression patterns similar to TCOF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TCOF1 ENSGALG00000005535 24554 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
2. UQCR11 ENSGALG00000001096 25245 1.801 - - - - - - 0.933 - - 0.868 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
3. DNAJC2 ENSGALG00000008249 28064 1.743 - - - - - - 0.935 - - 0.808 DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
4. GCSH ENSGALG00000032679 29231 1.723 - - - - - - 0.923 - - 0.800 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
5. PAK1IP1 ENSGALG00000012724 10907 1.685 - - - - - - 0.931 - - 0.754 PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
6. HYAL3 ENSGALG00000029000 712 1.669 - - 0.780 - - - - - - 0.889 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
7. ATP6V0C ENSGALG00000009229 125870 1.652 - - 0.730 - - - - - - 0.922 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
8. ALYREF ENSGALG00000007237 48479 1.642 - - - - - 0.716 0.926 - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
9. ENSGALG00000026433 ENSGALG00000026433 14463 1.624 - - - - - 0.737 - - - 0.887
10. WHSC1 1712 1.614 - - 0.712 - - - - - - 0.902 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
11. PRPF38B ENSGALG00000001972 2009 1.61 - - 0.761 - - - - - - 0.849 pre-mRNA processing factor 38B
12. SLC35B1 ENSGALG00000035057 10683 1.608 - - - - - 0.702 - - - 0.906 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
13. PGD ENSGALG00000002797 15115 1.578 - - - - - 0.707 - - - 0.871 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
14. TIAR TIAR 2471 1.568 - - 0.731 - - - - - - 0.837
15. NAA30 ENSGALG00000012098 4681 1.563 - - 0.732 - - - - - - 0.831 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
16. TWSG1 ENSGALG00000008400 1869 1.558 - - 0.760 - - - - - - 0.798 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
17. UBN1 ENSGALG00000031416 2848 1.556 - - 0.717 - - - - - - 0.839 ubinuclein 1 [Source:NCBI gene;Acc:416398]
18. SLC39A6 ENSGALG00000013209 1754 1.551 - - 0.730 - - - - - - 0.821 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
19. CHMP5 ENSGALG00000013160 13347 1.547 - - - - - - - 0.731 - 0.816 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
20. ZC3H11A ENSGALG00000000541 2712 1.543 - - 0.718 - - - - - - 0.825 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
21. CAMSAP1 ENSGALG00000001692 2617 1.54 - - 0.771 - - - - - - 0.769 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
22. HSPE1 ENSGALG00000009070 87567 1.536 - - 0.724 - - - - - - 0.812 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
23. NUBP1 ENSGALG00000007241 3791 1.522 - - 0.767 - - - - - - 0.755 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
24. HBXIP HBXIP 8637 1.52 - - - - - - - 0.741 - 0.779
25. SMC3 ENSGALG00000008585 16618 1.52 - - - - - - 0.784 0.736 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
26. UBE2E3 ENSGALG00000020793 9517 1.508 - - 0.723 - - - - - - 0.785 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
27. RRN3 ENSGALG00000041989 3934 1.497 - - 0.756 - - - - 0.741 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
28. FTD FTD 3041 1.496 - - 0.772 - - - - - - 0.724
29. SLK ENSGALG00000008318 2220 1.496 - - 0.767 - - - - - - 0.729 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
30. NOC4L ENSGALG00000002272 9644 1.445 - - - - - - - 0.744 - 0.701 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
31. SQLE ENSGALG00000036915 4172 1.414 - - 0.703 - - - - 0.711 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
32. LAMP2 ENSGALG00000008572 198 0.942 - - - - - - - - - 0.942 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
33. FIG4 ENSGALG00000015070 3018 0.937 - - - - - - 0.937 - - - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
34. ENSGALG00000007210 ENSGALG00000007210 2203 0.937 - - - - - - 0.937 - - -
35. GSTA GSTA 3130 0.937 - - - - - - 0.937 - - -
36. ZFP161 ZFP161 3538 0.937 - - - - - - 0.937 - - -
37. LGALS3 ENSGALG00000012173 3306 0.937 - - - - - - 0.937 - - - galectin 3 [Source:NCBI gene;Acc:373917]
38. ETFA ENSGALG00000002925 24053 0.936 - - - - - - 0.936 - - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
39. TXNRD3 ENSGALG00000039363 8016 0.936 - - - - - - 0.936 - - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
40. SFRP1 ENSGALG00000003473 5917 0.936 - - - - - - 0.936 - - - secreted frizzled related protein 1 [Source:NCBI gene;Acc:395237]
41. FAM63A 8470 0.936 - - - - - - 0.936 - - - family with sequence similarity 63 member A, transcript variant X2
42. CCDC85A ENSGALG00000043080 7624 0.936 - - - - - - 0.936 - - - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
43. CCNG1 ENSGALG00000001718 9873 0.936 - - - - - - 0.936 - - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
44. COQ9 ENSGALG00000001184 10174 0.936 - - - - - - 0.936 - - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
45. ATOX1 ENSGALG00000004176 16486 0.936 - - - - - - 0.936 - - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
46. ENSGALG00000002595 ENSGALG00000002595 32163 0.935 - - - - - - 0.935 - - -
47. UTRN ENSGALG00000012256 9980 0.934 - - - - - - 0.934 - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
48. PLK1 ENSGALG00000006110 12892 0.934 - - - - - - 0.934 - - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
49. PAPOLA ENSGALG00000033099 20532 0.929 - - - - - - 0.929 - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
50. SUMO1 ENSGALG00000008435 19847 0.928 - - - - - - 0.928 - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
51. PTP4A1 ENSGALG00000016271 23953 0.924 - - - - - - 0.924 - - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
52. MTSS1 ENSGALG00000041969 1312 0.924 - - - - - - - - - 0.924 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
53. DHX15 ENSGALG00000014395 24041 0.924 - - - - - - 0.924 - - - DEAH-box helicase 15 [Source:NCBI gene;Acc:422813]
54. NOL6 ENSGALG00000030730 7191 0.923 - - - - - - 0.923 - - - nucleolar protein 6
55. TOMM70A TOMM70A 24085 0.923 - - - - - - 0.923 - - -
56. GTF3C1 ENSGALG00000007387 5788 0.923 - - - - - - - - - 0.923 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
57. MYOCD ENSGALG00000001021 351 0.923 - - - - - - - - - 0.923 myocardin [Source:NCBI gene;Acc:427790]
58. COX4I1 68632 0.922 - - - - - - 0.922 - - - cytochrome c oxidase subunit 4I1, transcript variant X1
59. COMMD7 ENSGALG00000006630 11491 0.922 - - - - - - - - - 0.922 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
60. BDP1 BDP1 3073 0.921 - - - - - - - - - 0.921
61. AGGF1 ENSGALG00000004311 3011 0.92 - - - - - - - - - 0.920 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
62. CCDC88A ENSGALG00000043587 2208 0.92 - - - - - - - - - 0.920 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
63. SSR2 ENSGALG00000000764 32190 0.919 - - - - - - - - - 0.919 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
64. MPP5 ENSGALG00000009581 724 0.919 - - - - - - - - - 0.919 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
65. POLR1B ENSGALG00000032273 3845 0.916 - - - - - - - - - 0.916 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
66. TBC1D19 ENSGALG00000029673 1868 0.916 - - - - - - - - - 0.916 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
67. SLC39A13 ENSGALG00000008122 2003 0.916 - - - - - - - - - 0.916 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
68. CDH1-A CDH1-A 343 0.915 - - - - - - - - - 0.915
69. C5H11ORF58 C5H11ORF58 36659 0.914 - - - - - - 0.914 - - -
70. GRK4 ENSGALG00000015645 1065 0.914 - - - - - - - - - 0.914 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
71. SOX6 ENSGALG00000006074 102 0.914 - - - - - - - - - 0.914 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
72. SLC2A3 SLC2A3 527 0.913 - - - - - - - - - 0.913
73. PCLO 249 0.913 - - - - - - - - - 0.913 piccolo presynaptic cytomatrix protein
74. RHOT1 ENSGALG00000003397 5149 0.913 - - - - - - - - - 0.913 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
75. SGSH ENSGALG00000007027 1115 0.912 - - - - - - - - - 0.912 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
76. FBXO21 ENSGALG00000008201 2608 0.912 - - - - - - - - - 0.912 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
77. ZNF6 ZNF6 138 0.912 - - - - - - - - - 0.912
78. CASKIN1 604 0.912 - - - - - - - - - 0.912 CASK interacting protein 1, transcript variant X4
79. ARHGAP21 ENSGALG00000007721 3961 0.911 - - - - - - - - - 0.911 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
80. ENSGALG00000005389 ENSGALG00000005389 553 0.911 - - - - - - - - - 0.911
81. IL10R2 IL10R2 72 0.911 - - - - - - - - - 0.911
82. ENSGALG00000016007 ENSGALG00000016007 62448 0.911 - - - - - - 0.911 - - -
83. FAM190B FAM190B 165 0.91 - - - - - - - - - 0.910
84. DIAPH3 ENSGALG00000016937 1069 0.909 - - - - - - - - - 0.909 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
85. SNRNP48 ENSGALG00000013005 1468 0.909 - - - - - - - - - 0.909 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
86. PTX3 ENSGALG00000028284 2984 0.909 - - - - - - - - - 0.909 pentraxin 3 [Source:NCBI gene;Acc:548626]
87. CXADR ENSGALG00000015701 96 0.909 - - - - - - - - - 0.909 coxsackie virus and adenovirus receptor, transcript variant X2
88. AURKA ENSGALG00000007768 793 0.909 - - - - - - - - - 0.909 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
89. FBXO25 ENSGALG00000016359 1547 0.909 - - - - - - - - - 0.909 F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
90. ACADL ENSGALG00000002891 8058 0.909 - - - - - - - - - 0.909 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
91. ZNF106 ENSGALG00000009081 1520 0.908 - - - - - - - - - 0.908 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
92. 5S_2 5S_2 58 0.908 - - - - - - - - - 0.908
93. MSI1 ENSGALG00000007227 2279 0.908 - - - - - - - - - 0.908 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
94. CPNE2 ENSGALG00000001316 236 0.908 - - - - - - - - - 0.908 copine 2 [Source:NCBI gene;Acc:415646]
95. MB21D1 2460 0.907 - - - - - - - - - 0.907 Mab-21 domain containing 1
96. SMARCC1 ENSGALG00000032642 4842 0.907 - - - - - - - - - 0.907 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
97. ITSN2 ENSGALG00000016504 651 0.906 - - - - - - - - - 0.906 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
98. AP1G1 12403 0.906 - - - - - - - - - 0.906 adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
99. MIER1 ENSGALG00000011118 1418 0.906 - - - - - - - - - 0.906 MIER1 transcriptional regulator [Source:NCBI gene;Acc:424702]
100. KCNMA1 ENSGALG00000004980 261 0.906 - - - - - - - - - 0.906 potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]

There are 672 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA