Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TAF1D

Gene Name Gene ID Reads Annotation
TAF1D ENSGALG00000017220 3012 TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]











Genes with expression patterns similar to TAF1D

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TAF1D ENSGALG00000017220 3012 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]
2. YBX3 ENSGALG00000031890 819 1.62 - - 0.740 - - - - - 0.880 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
3. NR2C1 ENSGALG00000011327 5109 1.612 - - 0.848 - - - - - 0.764 - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
4. UHRF2 ENSGALG00000015052 1268 1.588 - - 0.845 - - - - - 0.743 - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
5. MIB1 ENSGALG00000014974 3583 1.585 - - 0.756 - - - - - 0.829 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
6. TTPAL ENSGALG00000004244 2734 1.576 - - 0.766 - - - - - 0.810 - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
7. DCP1B 1306 1.575 - - 0.716 - - - - - 0.859 - decapping mRNA 1B
8. SCHIP1 ENSGALG00000039468 5912 1.567 - - 0.777 - - - - - 0.790 - schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]
9. ZDHHC7 ENSGALG00000042522 1774 1.566 - - 0.704 - - - - - 0.862 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
10. RALGAPA2 240 1.539 - - 0.794 - - - - - 0.745 - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
11. WDR92 ENSGALG00000008760 3934 1.537 - - 0.782 - - - - - 0.755 - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
12. CHAMP1 ENSGALG00000016813 508 1.497 - - 0.787 - - - - - 0.710 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
13. SLC37A3 ENSGALG00000012849 836 1.494 - - 0.752 - - - - - 0.742 - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
14. MBSP MBSP 5634 1.489 - - 0.757 - - - - - 0.732 -
15. MED21 ENSGALG00000027435 5766 1.444 - - - - - - - 0.715 - 0.729 mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
16. CREB5 ENSGALG00000038265 92 0.911 - - - - - - - - 0.911 - cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
17. PHC3 ENSGALG00000009372 157 0.898 - - - - - - - - 0.898 - polyhomeotic homolog 3, transcript variant X8
18. FAM18B1 ENSGALG00000001335 5177 0.895 - - - - - - - - 0.895 - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
19. IQCA1 ENSGALG00000003980 87 0.893 - - - - - - - - 0.893 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
20. TOM1L2 ENSGALG00000004902 89 0.893 - - - - - - - - 0.893 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
21. CAMKK1 ENSGALG00000001617 64 0.892 - - - - - - - - 0.892 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
22. SHMT1 ENSGALG00000005046 1430 0.891 - - 0.891 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
23. CEP112 ENSGALG00000034989 123 0.886 - - - - - - - - 0.886 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
24. CEP250 ENSGALG00000026151 163 0.882 - - - - - - - - 0.882 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
25. SLC39A10 ENSGALG00000007777 272 0.882 - - - - - - - - 0.882 - solute carrier family 39 member 10 [Source:HGNC Symbol;Acc:HGNC:20861]
26. NTL ENSGALG00000005156 278 0.882 - - - - - - - - 0.882 - neurotrypsin-like, transcript variant X7
27. QSER1 ENSGALG00000012030 4490 0.882 - - 0.882 - - - - - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
28. F5 ENSGALG00000029298 1850 0.882 - - - - - - - - 0.882 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
29. RTFDC1 ENSGALG00000007709 1727 0.878 - - 0.878 - - - - - - - replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]
30. WBP4 ENSGALG00000016949 5858 0.877 - - 0.877 - - - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
31. SLC45A3 ENSGALG00000000703 85 0.875 - - - - - - - - 0.875 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
32. CXXC5 ENSGALG00000000884 16351 0.875 - - 0.875 - - - - - - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
33. TSNAX ENSGALG00000037177 3246 0.874 - - - - - - - - 0.874 - translin associated factor X [Source:NCBI gene;Acc:421526]
34. FASTKD3 ENSGALG00000033521 1186 0.873 - - - - - - - - 0.873 - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
35. LHCGR ENSGALG00000009095 174 0.871 - - - - - - - - 0.871 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
36. CHRNA7 ENSGALG00000004096 107 0.871 - - - - - - - - 0.871 - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
37. KRT14 ENSGALG00000003690 682 0.869 - - - - - - - - 0.869 - keratin 14 [Source:NCBI gene;Acc:408039]
38. PQLC1 ENSGALG00000043150 3133 0.868 - - 0.868 - - - - - - - PQ loop repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:26188]
39. CTNS ENSGALG00000004628 1358 0.866 - - 0.866 - - - - - - - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
40. TMEM8A ENSGALG00000026188 3092 0.866 - - 0.866 - - - - - - - transmembrane protein 8A [Source:HGNC Symbol;Acc:HGNC:17205]
41. CARS2 ENSGALG00000016847 3814 0.866 - - - - - - - - 0.866 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
42. PCLO 249 0.866 - - - - - - - - 0.866 - piccolo presynaptic cytomatrix protein
43. C1orf131 C1orf131 141 0.866 - - - - - - - - 0.866 -
44. XPOT ENSGALG00000009835 2953 0.866 - - - - - - - - 0.866 - exportin for tRNA [Source:NCBI gene;Acc:417824]
45. TGFBI ENSGALG00000029429 2306 0.864 - - 0.864 - - - - - - - transforming growth factor beta induced [Source:NCBI gene;Acc:395897]
46. SOBP ENSGALG00000043047 147 0.864 - - 0.864 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
47. RAD17 ENSGALG00000015571 1374 0.864 - - - - - - - - 0.864 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
48. SH3D19 ENSGALG00000010081 52 0.864 - - - - - - - - 0.864 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
49. IGF1R ENSGALG00000040651 772 0.863 - - - - - - - - 0.863 - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
50. MSX2 ENSGALG00000038848 6950 0.862 - - - - - - - - 0.862 - msh homeobox 2 [Source:NCBI gene;Acc:395245]
51. VPS13D ENSGALG00000034777 2350 0.861 - - 0.861 - - - - - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
52. DLC1 ENSGALG00000013715 5297 0.861 - - 0.861 - - - - - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
53. PDZRN4 ENSGALG00000009530 832 0.861 - - - - - - - - 0.861 - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
54. GDPD2 ENSGALG00000005842 86 0.861 - - - - - - - - 0.861 - glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974]
55. TAF15 ENSGALG00000002060 12320 0.86 - - - - - - - - 0.860 - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
56. SLTM ENSGALG00000004192 3244 0.859 - - - - - - - - 0.859 - SAFB like transcription modulator [Source:HGNC Symbol;Acc:HGNC:20709]
57. ODZ2 ODZ2 1380 0.859 - - - - - - - - 0.859 -
58. FAM120B ENSGALG00000011180 101 0.856 - - - - - - - - 0.856 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
59. AKT3 ENSGALG00000034081 866 0.855 - - 0.855 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
60. COQ3 ENSGALG00000015486 3508 0.855 - - 0.855 - - - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
61. ANKRD50 ENSGALG00000011831 2870 0.854 - - - - - - - - 0.854 - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
62. METTL16 ENSGALG00000014901 3720 0.853 - - 0.853 - - - - - - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
63. BRF1 ENSGALG00000011705 3406 0.853 - - 0.853 - - - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
64. APTX ENSGALG00000001954 692 0.852 - - 0.852 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
65. BACH1 ENSGALG00000015828 114 0.852 - - - - - - - - 0.852 - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
66. PIGK ENSGALG00000009015 7942 0.852 - - 0.852 - - - - - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
67. TCN2 3959 0.852 - - 0.852 - - - - - - - transcobalamin 2
68. KCNQ5 ENSGALG00000037249 321 0.852 - - - - - - - - 0.852 - potassium voltage-gated channel subfamily Q member 5 [Source:HGNC Symbol;Acc:HGNC:6299]
69. IQCD ENSGALG00000037307 642 0.849 - - 0.849 - - - - - - - IQ motif containing D, transcript variant X2
70. RIN3 ENSGALG00000010806 729 0.849 - - - - - - - - 0.849 - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
71. EPFIP1L ENSGALG00000007683 18050 0.847 - - - - - - - - 0.847 - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
72. ATP10D ENSGALG00000014192 94 0.845 - - 0.845 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
73. ARRDC4 ENSGALG00000007012 1039 0.845 - - 0.845 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
74. LRP12 ENSGALG00000033630 2534 0.844 - - - - - - - - 0.844 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
75. RUFY2 1442 0.844 - - - - - - - - 0.844 - RUN and FYVE domain containing 2, transcript variant X1
76. FLRT3 ENSGALG00000008716 593 0.844 - - - - - - - - 0.844 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
77. SLCO4A1 ENSGALG00000005460 109 0.843 - - - - - - - - 0.843 - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
78. LRRC59 ENSGALG00000007673 2081 0.843 - - - - - - - - 0.843 - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
79. SFXN2 ENSGALG00000008114 2773 0.843 - - - - - - - - 0.843 - sideroflexin 2, transcript variant X6
80. SYNE1 ENSGALG00000013505 2324 0.841 - - 0.841 - - - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
81. PRDM15 ENSGALG00000019178 2729 0.84 - - - - - - - - 0.840 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
82. TMEM74 ENSGALG00000041553 398 0.839 - - - - - - - - 0.839 - transmembrane protein 74 [Source:HGNC Symbol;Acc:HGNC:26409]
83. C1orf21 ENSGALG00000020922 4035 0.838 - - 0.838 - - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
84. SS18 ENSGALG00000015119 4687 0.838 - - - - - - - - 0.838 - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
85. TPM4 ENSGALG00000002563 15621 0.836 - - - - - - - - 0.836 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
86. CAMK4 ENSGALG00000000244 151 0.835 - - - - - - - - 0.835 - calcium/calmodulin dependent protein kinase IV [Source:NCBI gene;Acc:723973]
87. TXNRD1 ENSGALG00000035345 4784 0.835 - - - - - - - - 0.835 - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
88. ALMS1 ENSGALG00000044620 570 0.834 - - - - - - - - 0.834 - ALMS1, centrosome and basal body associated protein, transcript variant X1
89. PDXDC1 ENSGALG00000034829 406 0.834 - - - - - - - - 0.834 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
90. ANKRD49 ENSGALG00000017210 3247 0.834 - - - - - - - - 0.834 - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
91. CCNA2 ENSGALG00000011881 2574 0.833 - - 0.833 - - - - - - - cyclin A2 [Source:NCBI gene;Acc:396172]
92. PGS1 ENSGALG00000007181 3187 0.833 - - - - - - - - 0.833 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
93. SEMA3E ENSGALG00000038225 677 0.832 - - - - - - - - 0.832 - semaphorin 3E [Source:NCBI gene;Acc:374089]
94. BTBD9 ENSGALG00000010131 1870 0.832 - - 0.832 - - - - - - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
95. FDFT1 ENSGALG00000016665 3053 0.832 - - - - - - - - 0.832 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
96. SMAP2 ENSGALG00000029244 498 0.831 - - - - - - - - 0.831 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
97. ARPC2 ENSGALG00000011452 7338 0.831 - - - - - - - - 0.831 - actin related protein 2/3 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:705]
98. KLHL15 ENSGALG00000016345 1638 0.831 - - - - - - - - 0.831 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
99. OGFOD2 ENSGALG00000003687 1200 0.83 - - 0.830 - - - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25823]
100. GORAB ENSGALG00000003329 1958 0.83 - - 0.830 - - - - - - - golgin, RAB6 interacting [Source:HGNC Symbol;Acc:HGNC:25676]

There are 493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA