Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STRA8

Gene Name Gene ID Reads Annotation
STRA8 ENSGALG00000011722 4 stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]











Genes with expression patterns similar to STRA8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STRA8 ENSGALG00000011722 4 4 - - 1.000 - - 1.000 - 1.000 - 1.000 stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
2. MFSD11 ENSGALG00000001777 8 2 - - - - - 1.000 - 1.000 - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
3. GTF3C3 ENSGALG00000007958 6 2 - - - - - 1.000 - 1.000 - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
4. ENPP4 ENSGALG00000016708 18 1.958 - - - - - 1.000 - 0.958 - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
5. AGRP ENSGALG00000002244 27 1.862 - - - - - 1.000 - 0.862 - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
6. MAP3K14 ENSGALG00000000685 57 1.675 - - - - - 0.972 - 0.703 - - mitogen-activated protein kinase kinase kinase 14 [Source:NCBI gene;Acc:419964]
7. WFDC2 ENSGALG00000031164 37 1 - - - - - 1.000 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
8. LOC423752 ENSGALG00000020899 17 1 - - - - - - - - - 1.000 uncharacterized LOC423752, transcript variant X1
9. RNF217 ENSGALG00000013651 1 1 - - - - - 1.000 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
10. WDR41 ENSGALG00000004350 16 1 - - - - - 1.000 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
11. PPM1F ENSGALG00000039121 26 1 - - - - - 1.000 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
12. KATNAL2 ENSGALG00000041882 1 1 - - - - - 1.000 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
13. LDB1 ENSGALG00000007641 2 1 - - - - - 1.000 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
14. NME4 ENSGALG00000002688 1 1 - - - - - 1.000 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
15. TMEM189 ENSGALG00000026906 14 1 - - - - - 1.000 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
16. AK4 ENSGALG00000011035 9 1 - - - - - 1.000 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
17. FOLR1 ENSGALG00000017343 1 1 - - - - - - - - - 1.000 folate receptor 1 [Source:NCBI gene;Acc:395638]
18. DNM3 ENSGALG00000033244 6 1 - - - - - - - - - 1.000 dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
19. MNOC MNOC 1 1 - - - - - 1.000 - - - -
20. TSNAXIP1 ENSGALG00000001533 9 1 - - - - - - - - - 1.000 translin associated factor X interacting protein 1, transcript variant X2
21. ENSGALG00000009237 ENSGALG00000009237 3 1 - - - - - - - - - 1.000
22. SLC26A6 ENSGALG00000026089 3 1 - - - - - 1.000 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
23. TBX15 0 1 - - - - - 1.000 - - - - T-box 15
24. TRIM25 ENSGALG00000003144 12 1 - - - - - 1.000 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
25. GAL12 GAL12 2 1 - - - - - - - - - 1.000
26. ERI3 ENSGALG00000010106 995 1 - - - - - 1.000 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
27. AATK ENSGALG00000006901 1 1 - - - - - 1.000 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
28. BRF2 ENSGALG00000003124 1 1 - - - - - - - - - 1.000 BRF2, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:17298]
29. SMIM10 SMIM10 2 1 - - - - - - - 1.000 - -
30. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - - - - - 1.000
31. PLEKHG3 ENSGALG00000036199 1 1 - - - - - - - - - 1.000 pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
32. SLCO4A1 ENSGALG00000005460 109 1 - - - - - - - 1.000 - - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
33. C17orf105 C17orf105 11 1 - - - - - 1.000 - - - -
34. gga-mir-10a ENSGALG00000021952 4 1 - - - - - 1.000 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
35. GAMT ENSGALG00000040182 5 1 - - - - - 1.000 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
36. FKHR FKHR 1 1 - - - - - 1.000 - - - -
37. SOD3 ENSGALG00000018557 16 1 - - - - - 1.000 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
38. PABPN1L ENSGALG00000006242 3 1 - - - - - 1.000 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
39. ABCC8 ENSGALG00000006172 41 1 - - - - - - - - - 1.000 ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
40. TRHDE ENSGALG00000010200 4 1 - - - - - - - - - 1.000 thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
41. ENSGALG00000015793 ENSGALG00000015793 12 1 - - - - - - - - - 1.000
42. SNORA24 SNORA24 2 1 - - - - - 1.000 - - - -
43. TRAF1 ENSGALG00000001583 3 1 - - - - - - - - - 1.000 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
44. CYP2U1 ENSGALG00000027908 13 1 - - - - - - - 1.000 - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
45. gga-mir-301a ENSGALG00000029989 5 1 - - - - - 1.000 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
46. OVST_1 ENSGALG00000011930 9 1 - - - - - 1.000 - - - - ovostatin [Source:NCBI gene;Acc:396151]
47. LPP ENSGALG00000007337 18 1 - - - - - 1.000 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
48. DSCAML1 ENSGALG00000007314 1 1 - - - - - 1.000 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
49. ENSGALG00000013409 ENSGALG00000013409 4 1 - - - - - 1.000 - - - -
50. ELFN2 ENSGALG00000012446 11 1 - - - - - - - - - 1.000 extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
51. MAVS ENSGALG00000040428 1 1 - - - - - 1.000 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
52. FAM3D ENSGALG00000007152 4 1 - - - - - - - 1.000 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
53. VPS37D 3 1 - - - - - 1.000 - - - - VPS37D, ESCRT-I subunit
54. DNMBP ENSGALG00000007304 4 1 - - - - - 1.000 - - - - dynamin binding protein
55. DTX1 ENSGALG00000027897 1 1 - - - - - - - - - 1.000 deltex E3 ubiquitin ligase 1 [Source:HGNC Symbol;Acc:HGNC:3060]
56. MINPP1 ENSGALG00000003695 1 1 - - - - - 1.000 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
57. TG ENSGALG00000039509 19 1 - - - - - - - 1.000 - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
58. FUK ENSGALG00000002648 9 1 - - - - - - - - - 1.000 fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
59. TRPC7 ENSGALG00000006297 1 1 - - - - - - - - - 1.000 transient receptor potential cation channel subfamily C member 7 [Source:HGNC Symbol;Acc:HGNC:20754]
60. CBL ENSGALG00000029077 6 1 - - - - - 1.000 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
61. RPS6KA2 ENSGALG00000011473 2 1 - - - - - 1.000 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
62. MAGI1 ENSGALG00000007431 23 1 - - - - - 1.000 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
63. CORO6 ENSGALG00000028949 21 1 - - - - - 1.000 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
64. HID1 ENSGALG00000007808 2 1 - - - - - 1.000 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
65. BAFF BAFF 40 1 - - - - - 1.000 - - - -
66. HTR7 ENSGALG00000040549 1 1 - - - - - - - - - 1.000 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
67. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - - - 1.000
68. ANKS3 ENSGALG00000000643 2 1 - - - - - - - 1.000 - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
69. ENSGALG00000028116 ENSGALG00000028116 0 1 - - - - - 1.000 - - - -
70. FARP2 ENSGALG00000005788 6 1 - - - - - 1.000 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
71. TBPL2 ENSGALG00000012145 1 1 - - - - - - - - - 1.000 TATA-box binding protein like 2 [Source:NCBI gene;Acc:776269]
72. PLD5 ENSGALG00000010737 5 1 - - - - - 1.000 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
73. ZNRF2 ENSGALG00000031163 0 1 - - - - - 1.000 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
74. TIMP2 ENSGALG00000027070 33 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
75. VSTM2A ENSGALG00000041764 2 1 - - - - - 1.000 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
76. PGAP3 ENSGALG00000022030 87 1 - - - - - - - 1.000 - - post-GPI attachment to proteins 3 [Source:HGNC Symbol;Acc:HGNC:23719]
77. STX3 ENSGALG00000035153 1 1 - - - - - 1.000 - - - - syntaxin 3
78. RAB4A ENSGALG00000036218 20 1 - - - - - - - - - 1.000 RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
79. ENSGALG00000018356 ENSGALG00000018356 22 1 - - - - - - - 1.000 - -
80. DPH1 ENSGALG00000003082 5 1 - - - - - - - 1.000 - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
81. ENSGALG00000021682 ENSGALG00000021682 0 1 - - - - - 1.000 - - - -
82. PSTPIP1 ENSGALG00000002786 9 1 - - - - - 1.000 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
83. CARF ENSGALG00000008474 6 1 - - - - - 1.000 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
84. SCRIB ENSGALG00000032790 4 1 - - - - - - - - - 1.000 scribbled planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]
85. SP-A SP-A 9 1 - - - - - 1.000 - - - -
86. VILL ENSGALG00000005763 4 1 - - - - - - - 1.000 - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
87. PBEF1 PBEF1 25 1 - - - - - - - - - 1.000
88. PPP1R12B ENSGALG00000000336 16 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory subunit 12B [Source:NCBI gene;Acc:395478]
89. ARHGEF17 6 1 - - - - - 1.000 - - - - Rho guanine nucleotide exchange factor 17
90. F-KER ENSGALG00000028706 0 1 - - - - - 1.000 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
91. PPP1R1B ENSGALG00000044406 6 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
92. PIGR ENSGALG00000000919 3 1 - - - - - - - - - 1.000 polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
93. GBE ENSGALG00000011859, ENSGALG00000028016 2 1 - - - - - 1.000 - - - - eye-globin, transcript variant X3
94. ZHX3 ENSGALG00000039155 5 1 - - - - - - - - - 1.000 zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
95. B3GAT1L ENSGALG00000015075 2 1 - - - - - - - 1.000 - - beta-1,3-glucuronyltransferase 1-like [Source:NCBI gene;Acc:408180]
96. AFTPH ENSGALG00000008828 21 1 - - - - - 1.000 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
97. ENTPD2 ENSGALG00000039696 3 1 - - - - - - - - - 1.000 ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
98. EFHC2 ENSGALG00000016221 8 1 - - - - - - - - - 1.000 EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
99. LRRC19 ENSGALG00000045028 2 1 - - - - - - - - - 1.000 leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
100. CDH6 ENSGALG00000012917 17 1 - - - - - - - 1.000 - - cadherin 6 [Source:NCBI gene;Acc:414842]

There are 247 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA