Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SSBP2

Gene Name Gene ID Reads Annotation
SSBP2 ENSGALG00000023089 131 single stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15831]











Genes with expression patterns similar to SSBP2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SSBP2 ENSGALG00000023089 131 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 single stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15831]
2. PTPRQ ENSGALG00000010935 626 1.529 - - 0.710 - - - - 0.819 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
3. LHFP 167 0.944 - - - - - - - 0.944 - - lipoma HMGIC fusion partner
4. DNASE1L3 386 0.941 - - - - - 0.941 - - - - deoxyribonuclease 1 like 3
5. MAP3K13 ENSGALG00000006655 632 0.921 - - - - - - - 0.921 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
6. KHDRBS2 ENSGALG00000016276 110 0.902 - - - - - - - 0.902 - - KH RNA binding domain containing, signal transduction associated 2 [Source:HGNC Symbol;Acc:HGNC:18114]
7. BCL2 ENSGALG00000012885 45 0.894 - - - - - - 0.894 - - - BCL2, apoptosis regulator [Source:NCBI gene;Acc:396282]
8. GTPBP6 ENSGALG00000016717 17 0.893 - - - - - - - 0.893 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
9. MUC13 7 0.893 - - - - - - - 0.893 - - mucin 13, cell surface associated, transcript variant X10
10. ENSGALG00000023027 ENSGALG00000023027 5 0.893 - - - - - - - 0.893 - -
11. GABRA5 ENSGALG00000016744 12 0.893 - - - - - - - 0.893 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
12. ACACB 6 0.893 - - - - - - - 0.893 - - acetyl-CoA carboxylase beta
13. SPATA4 ENSGALG00000010822 4 0.893 - - - - - - - 0.893 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
14. TREM-B1 ENSGALG00000003361 8 0.893 - - - - - - - 0.893 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
15. DBN1 ENSGALG00000033405 216 0.893 - - - - - - - 0.893 - - drebrin 1 [Source:NCBI gene;Acc:396496]
16. snoZ39 snoZ39 2 0.893 - - - - - - - 0.893 - -
17. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.893 - - - - - - - 0.893 - - family with sequence similarity 214 member B, transcript variant X14
18. ALKBH3 ENSGALG00000041309 7 0.893 - - - - - - - 0.893 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
19. SOX10 ENSGALG00000012290 3942 0.893 - - - - - - - 0.893 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
20. ENSGALG00000028652 ENSGALG00000028652 65 0.893 - - - - - - - 0.893 - -
21. HBP1 ENSGALG00000008050 19 0.893 - - - - - - - 0.893 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
22. SLC30A8 ENSGALG00000034377 3 0.893 - - - - - - - 0.893 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
23. ENSGALG00000023353 ENSGALG00000023353 1 0.893 - - - - - - - 0.893 - -
24. CD101 12 0.893 - - - - - - - 0.893 - - CD101 molecule, transcript variant X4
25. GP5 ENSGALG00000045125 3 0.893 - - - - - - - 0.893 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
26. CDHR1 ENSGALG00000002314 24 0.893 - - - - - - - 0.893 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
27. GSAP ENSGALG00000008312 12 0.893 - - - - - - - 0.893 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
28. C1orf228 3 0.893 - - - - - - - 0.893 - - chromosome 1 open reading frame 228, transcript variant X5
29. SFT2D2 ENSGALG00000019228 10 0.893 - - - - - - - 0.893 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
30. GPR17 ENSGALG00000037153 3 0.893 - - - - - - - 0.893 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
31. SUSD1 ENSGALG00000015677 12 0.893 - - - - - - - 0.893 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
32. SWAP70 ENSGALG00000005750 32 0.889 - - - - - - - 0.889 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
33. GABRA2 ENSGALG00000014206 19 0.887 - - - - - - - 0.887 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
34. CPEB4 ENSGALG00000033512 779 0.88 - - - - - - - 0.880 - - cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21747]
35. PTBP3 ENSGALG00000015669 16 0.877 - - - - - - - 0.877 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
36. TOM1L2 ENSGALG00000004902 89 0.872 - - - - - - - 0.872 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
37. NMRAL1 ENSGALG00000029820 29 0.864 - - - - - - - 0.864 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
38. SRRL ENSGALG00000002638 26 0.864 - - - - - - - 0.864 - - serine racemase-like, transcript variant X8
39. INSC ENSGALG00000032558 74 0.863 - - - - - - - 0.863 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
40. PRKRIR PRKRIR 46 0.863 - - - - - - - 0.863 - -
41. DAAM1 ENSGALG00000012017 81 0.853 - - 0.853 - - - - - - - Gallus gallus dishevelled associated activator of morphogenesis 1 (DAAM1), mRNA. [Source:RefSeq mRNA;Acc:NM_001322368]
42. USP48 ENSGALG00000030857 471 0.851 - - - - - - - 0.851 - - ubiquitin specific peptidase 48 [Source:NCBI gene;Acc:769457]
43. ENSGALG00000020972 ENSGALG00000020972 54 0.85 - - - - - - - 0.850 - -
44. URB2 ENSGALG00000011101 12 0.848 - - - - - - - 0.848 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
45. HECTD2 ENSGALG00000038043 177 0.848 - - - - - - - 0.848 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
46. ZP1 ENSGALG00000031916 122 0.848 - - - - - - - 0.848 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
47. CHGB ENSGALG00000046616 357 0.843 - - - - - - - 0.843 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
48. RAB43 ENSGALG00000005021 5 0.842 - - - - - - - 0.842 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
49. AHNAK2 58 0.841 - - - - - - 0.841 - - - AHNAK nucleoprotein 2, transcript variant X2
50. PWWP2B ENSGALG00000010491 30 0.84 - - - - - - - 0.840 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
51. BFIV21 BFIV21 30 0.834 - - - - - - - 0.834 - -
52. ZNF507 ENSGALG00000004532 78 0.834 - - - - - - - 0.834 - - zinc finger protein 507, transcript variant X2
53. HEXDCL ENSGALG00000005861 172 0.832 - - - - - - 0.832 - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing-like, transcript variant X10
54. SGK2 ENSGALG00000003537 26 0.832 - - - - - - 0.832 - - - SGK2, serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]
55. GHR ENSGALG00000014855 131 0.83 - - - - - - 0.830 - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
56. BBS9 ENSGALG00000031650 13 0.83 - - - - - - - 0.830 - - Bardet-Biedl syndrome 9, transcript variant X5
57. RAD54L2 ENSGALG00000003243 187 0.829 - - - - - - - 0.829 - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
58. KIF9 ENSGALG00000005517 70 0.82 - - - - - 0.820 - - - - kinesin family member 9 [Source:HGNC Symbol;Acc:HGNC:16666]
59. ENSGALG00000026756 ENSGALG00000026756 134 0.819 - - - - - - - 0.819 - -
60. GPR103 GPR103 18 0.816 - - - - - - - 0.816 - -
61. IQUB ENSGALG00000008823 65 0.806 - - - - - - - 0.806 - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
62. VTG1 ENSGALG00000039354 17 0.805 - - 0.805 - - - - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
63. IKZF1 ENSGALG00000013086 58 0.8 - - - - - - - 0.800 - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
64. TBC1D8B ENSGALG00000009040 75 0.799 - - - - - - - 0.799 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
65. USP53 ENSGALG00000011990 12 0.794 - - - 0.794 - - - - - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
66. ADGB ENSGALG00000012317 28 0.793 - - - - - - - 0.793 - - androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
67. ENSGALG00000023735 ENSGALG00000023735 12 0.792 - - - - - - - 0.792 - -
68. LOC416530 ENSGALG00000005291 207 0.792 - - - - - - - 0.792 - - uncharacterized LOC416530, transcript variant X1
69. FAM184A ENSGALG00000014881 75 0.791 - - - - - - - 0.791 - - family with sequence similarity 184 member A [Source:HGNC Symbol;Acc:HGNC:20991]
70. HS6ST2 ENSGALG00000034250 42 0.787 - - 0.787 - - - - - - - heparan sulfate 6-O-sulfotransferase 2 [Source:NCBI gene;Acc:395150]
71. ECSCR ENSGALG00000024379 313 0.786 - - - - - - - 0.786 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
72. MPP5 ENSGALG00000009581 724 0.784 - - - - - - 0.784 - - - membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
73. ZSWIM6 ENSGALG00000014734 7 0.781 - - 0.781 - - - - - - - zinc finger SWIM-type containing 6, transcript variant X2
74. gga-mir-2954 ENSGALG00000026107 462 0.78 - - - - - - - 0.780 - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
75. FGB ENSGALG00000009262 1169 0.78 - - - - - 0.780 - - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
76. DISP2 ENSGALG00000031266 5 0.78 - - 0.780 - - - - - - - dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]
77. A1CF ENSGALG00000003765 36 0.779 - - - - - - - 0.779 - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
78. PCDH10 ENSGALG00000009719 483 0.778 - - - - - 0.778 - - - - protocadherin 10 [Source:NCBI gene;Acc:408048]
79. SYNRG ENSGALG00000005468 27 0.776 - - 0.776 - - - - - - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
80. ENSGALG00000001269 ENSGALG00000001269 5 0.776 - - 0.776 - - - - - - -
81. KIF26B ENSGALG00000010664 41 0.776 - - 0.776 - - - - - - - kinesin family member 26B [Source:HGNC Symbol;Acc:HGNC:25484]
82. NPHS2 ENSGALG00000004163 850 0.776 - - 0.776 - - - - - - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
83. C15orf61 ENSGALG00000028141 56 0.773 - - - - - - - 0.773 - - chromosome 15 open reading frame 61 [Source:NCBI gene;Acc:101747767]
84. CLEC18B ENSGALG00000027183 284 0.772 - - - - - - - 0.772 - - C-type lectin domain family 18 member B, transcript variant X2
85. BCAT1 ENSGALG00000013177 258 0.771 - - - - - 0.771 - - - - branched chain amino acid transaminase 1 [Source:HGNC Symbol;Acc:HGNC:976]
86. ABCB5 ENSGALG00000010901 60 0.77 - - 0.770 - - - - - - - ATP binding cassette subfamily B member 5, transcript variant X1
87. WNT4 ENSGALG00000041708 1277 0.769 - - - - - - - 0.769 - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
88. MLH3 ENSGALG00000010304 231 0.767 - - - - - - - 0.767 - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
89. RUNX2 ENSGALG00000040276 499 0.767 - - 0.767 - - - - - - - runt related transcription factor 2 [Source:NCBI gene;Acc:373919]
90. ANKRD31 46 0.764 - - - - - - 0.764 - - - ankyrin repeat domain 31, transcript variant X2
91. AK5 ENSGALG00000031652 12 0.764 - - 0.764 - - - - - - - adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
92. CER1 ENSGALG00000005434 3 0.764 - - 0.764 - - - - - - - cerberus 1, DAN family BMP antagonist [Source:NCBI gene;Acc:395623]
93. FANCF ENSGALG00000003660 25 0.762 - - - - - - - 0.762 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
94. ALOX5 ENSGALG00000005857 73 0.761 - - - - - - - 0.761 - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
95. UPRT ENSGALG00000007793 321 0.761 - - - - - - - 0.761 - - uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
96. LOC415478 ENSGALG00000021171 100 0.757 - - 0.757 - - - - - - - transmembrane protein 2-like, transcript variant X2
97. GHRHR ENSGALG00000005212 1 0.757 - - 0.757 - - - - - - - growth hormone releasing hormone receptor [Source:NCBI gene;Acc:420385]
98. LOC427654 ENSGALG00000021286 1 0.757 - - 0.757 - - - - - - - parvalbumin beta-like, transcript variant X2
99. PLAGL2 ENSGALG00000006586 3 0.757 - - 0.757 - - - - - - - PLAG1 like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:9047]
100. CAD19 CAD19 17 0.757 - - 0.757 - - - - - - -

There are 122 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA