Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SSBP1

Gene Name Gene ID Reads Annotation
SSBP1 ENSGALG00000012876 34256 single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]











Genes with expression patterns similar to SSBP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SSBP1 ENSGALG00000012876 34256 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
2. PPIH ENSGALG00000004874 25558 1.584 - - - - 0.720 - 0.864 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
3. FKBP12 FKBP12 64317 1.568 - - - - 0.720 - 0.848 - - -
4. GMNN ENSGALG00000013626 15838 1.531 - - - - - - 0.779 0.752 - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
5. METAP2 ENSGALG00000011377 16311 1.5 - - - - 0.702 - 0.798 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
6. WDR43 ENSGALG00000032529 12235 1.476 - - - - - - 0.773 0.703 - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
7. ARF6 ENSGALG00000026944 22014 1.442 - - - - 0.710 - 0.732 - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
8. AGFG1 ENSGALG00000003052 4766 1.421 - - - - - - 0.715 - 0.706 - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
9. SNX7 ENSGALG00000005478 4736 1.418 - - - - - - 0.713 - 0.705 - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
10. EWSR1 ENSGALG00000008149 13014 0.929 - - - - - - 0.929 - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
11. SEC11A ENSGALG00000037553 32123 0.903 - - - - - - 0.903 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
12. THRAP3 ENSGALG00000002144 21958 0.902 - - - - - - 0.902 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
13. PDCD10 ENSGALG00000009477 7061 0.897 - - - - - - 0.897 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
14. EIF3B ENSGALG00000040999 49971 0.895 - - - - - - 0.895 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
15. EIF2S1 ENSGALG00000009565 63906 0.893 - - - - - - 0.893 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
16. NDUFS7 ENSGALG00000009703 19674 0.893 - - - - - - 0.893 - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
17. PDIA4 ENSGALG00000043006 22992 0.892 - - - - - - 0.892 - - - protein disulfide isomerase family A member 4 [Source:NCBI gene;Acc:420785]
18. NUTF2 ENSGALG00000001602 32832 0.891 - - - - - - 0.891 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
19. SOD1 ENSGALG00000015844 35836 0.889 - - - - - - 0.889 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
20. CLINT1 ENSGALG00000003702 11269 0.888 - - - - - - 0.888 - - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
21. PPP1R7 ENSGALG00000031766 22187 0.888 - - - - - - 0.888 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
22. DKC1 ENSGALG00000005054 30350 0.886 - - - - - - 0.886 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
23. HMGB2 ENSGALG00000010745 89235 0.884 - - - - - - 0.884 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
24. TXNDC17 ENSGALG00000027950 45004 0.881 - - - - - - 0.881 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
25. TXN2 ENSGALG00000012532 12518 0.88 - - - - - - 0.880 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
26. DEK ENSGALG00000012684 14179 0.878 - - - - - - 0.878 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
27. TPMT ENSGALG00000012687 9537 0.878 - - - - - - 0.878 - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
28. CSE1L ENSGALG00000004707 20653 0.876 - - - - - - 0.876 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
29. HMGN3 ENSGALG00000015880 30919 0.876 - - - - - - 0.876 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
30. NDUFAB1 ENSGALG00000006073 40467 0.875 - - - - - - 0.875 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
31. XBP1 ENSGALG00000005796 14007 0.875 - - - - - - 0.875 - - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
32. NDUFA8 ENSGALG00000040987 49453 0.874 - - - - - - 0.874 - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
33. TXNDC12 ENSGALG00000010569 13822 0.872 - - - - - - 0.872 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
34. EIF4A2 ENSGALG00000008684 58507 0.871 - - - - - - 0.871 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
35. PRELID1 ENSGALG00000002990 55592 0.871 - - - - - - 0.871 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
36. SMC4 ENSGALG00000009553 15715 0.871 - - - - - - 0.871 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
37. ENSGALG00000006463 ENSGALG00000006463 45151 0.871 - - - - - - 0.871 - - -
38. Mar-05 Mar-05 6330 0.87 - - - - - - 0.870 - - -
39. TMEM199 ENSGALG00000023757 10781 0.869 - - - - - - 0.869 - - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
40. SIKE1 ENSGALG00000002147 20836 0.868 - - - - - - 0.868 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
41. NAA38 ENSGALG00000045783 11229 0.867 - - - - - - 0.867 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
42. MRPL20 ENSGALG00000001542 28764 0.866 - - - - - - 0.866 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
43. PSMB4 ENSGALG00000000905 46735 0.864 - - - - - - 0.864 - - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
44. SSR3 ENSGALG00000028683 24334 0.861 - - - - - - 0.861 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
45. PCNP ENSGALG00000015330 15750 0.859 - - - - - - 0.859 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
46. DUT ENSGALG00000038032 34659 0.858 - - - - - - 0.858 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
47. ENSGALG00000009044 ENSGALG00000009044 14492 0.858 - - - - - - 0.858 - - -
48. PSMB2 ENSGALG00000026421 51885 0.857 - - - - - - 0.857 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
49. YWHAZ ENSGALG00000031387 84985 0.857 - - - - - - 0.857 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
50. ENSGALG00000016887 ENSGALG00000016887 20086 0.855 - - - - - - 0.855 - - -
51. UQCR10 ENSGALG00000008066 52968 0.855 - - - - - - 0.855 - - - ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
52. PPP1CC ENSGALG00000004571 14748 0.854 - - - - - - 0.854 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
53. DYNLT1 ENSGALG00000019979 38176 0.854 - - - - - - 0.854 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
54. SRI ENSGALG00000008985 13865 0.852 - - - - - - 0.852 - - - sorcin [Source:NCBI gene;Acc:420538]
55. POLR2K ENSGALG00000036019 8962 0.852 - - - - - - 0.852 - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
56. MORF4L1 ENSGALG00000008146 29940 0.85 - - - - - - 0.850 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
57. DNAJC9 ENSGALG00000002701 19249 0.847 - - - - - - 0.847 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
58. TM9SF2 ENSGALG00000016878 11548 0.845 - - - - - - 0.845 - - - transmembrane 9 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11865]
59. LLPH ENSGALG00000019358 20976 0.845 - - - - - - 0.845 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
60. ARL6IP1 ENSGALG00000006780 16471 0.844 - - - - - - 0.844 - - - ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:NCBI gene;Acc:416604]
61. RPL36AL ENSGALG00000004952 205590 0.844 - - - - - - 0.844 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
62. PSMB7 ENSGALG00000001103 42683 0.843 - - - - - - 0.843 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
63. LUC7L2 ENSGALG00000036238 11817 0.843 - - - - - - 0.843 - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
64. BRD7 ENSGALG00000003786 26858 0.843 - - - - - - 0.843 - - - bromodomain containing 7 [Source:NCBI gene;Acc:415730]
65. AATF ENSGALG00000005420 6501 0.842 - - - - - - 0.842 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
66. RAD21 ENSGALG00000029523 25658 0.842 - - - - - - 0.842 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
67. SLC25A39 ENSGALG00000042894 10654 0.842 - - - - - - 0.842 - - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
68. C11H16ORF80 C11H16ORF80 18673 0.841 - - - - - - 0.841 - - -
69. C1QBP ENSGALG00000001654 34814 0.841 - - - - - - 0.841 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
70. TMEM167A ENSGALG00000027332 13862 0.841 - - - - - - 0.841 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
71. SMARCA5 ENSGALG00000009913 20059 0.84 - - - - - - 0.840 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
72. SNRNP40 ENSGALG00000000615 32298 0.84 - - - - - - 0.840 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
73. COMMD10 ENSGALG00000002308 7442 0.84 - - - - - - 0.840 - - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
74. PTP4A2 ENSGALG00000003265 24826 0.839 - - - - - - 0.839 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
75. NKIRAS2 ENSGALG00000028971 3414 0.839 - - - - - - 0.839 - - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
76. METTL23 ENSGALG00000001790 7906 0.838 - - - - - - 0.838 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
77. TMEM123 ENSGALG00000017185 6798 0.837 - - - - - - 0.837 - - - transmembrane protein 123 [Source:NCBI gene;Acc:418984]
78. HADHB ENSGALG00000016555 24530 0.834 - - - - - - 0.834 - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:HGNC Symbol;Acc:HGNC:4803]
79. BLMH ENSGALG00000004259 36907 0.834 - - - - - - 0.834 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
80. GLO1 ENSGALG00000010127 31662 0.833 - - - - - - 0.833 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
81. GABARAPL2 ENSGALG00000003208 9195 0.832 - - - - - - 0.832 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
82. WBSCR22 6082 0.831 - - - - - - 0.831 - - - Williams-Beuren syndrome chromosome region 22
83. HMGN1 ENSGALG00000016067 17375 0.831 - - - - - - 0.831 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
84. UCHL3 ENSGALG00000016921 16208 0.828 - - - - - - 0.828 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
85. COMMD1 ENSGALG00000008931 12202 0.828 - - - - - - 0.828 - - - copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
86. FBXO3 ENSGALG00000034029 15089 0.827 - - - - - - 0.827 - - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
87. MRPL40 ENSGALG00000001587 20893 0.827 - - - - - - 0.827 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
88. PARP1 ENSGALG00000009228 39433 0.826 - - - - - - 0.826 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
89. AP1B1 ENSGALG00000042213 4828 0.826 - - - - - - 0.826 - - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
90. ADSL ENSGALG00000012034 10280 0.825 - - - - - - 0.825 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
91. RPS17 ENSGALG00000002157 142120 0.824 - - - - - - 0.824 - - - ribosomal protein S17 [Source:NCBI gene;Acc:374053]
92. SNRNP27 ENSGALG00000013883 22212 0.823 - - - - - - 0.823 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
93. RPL12 ENSGALG00000008806 229862 0.823 - - - - - - 0.823 - - - ribosomal protein L12 [Source:NCBI gene;Acc:417264]
94. MRPL50 ENSGALG00000015543 11649 0.822 - - - - - - 0.822 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
95. MMD ENSGALG00000003078 21311 0.822 - - - - - - 0.822 - - - monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
96. CHTF8 ENSGALG00000000632 7230 0.821 - - - - - - 0.821 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
97. C C 7669 0.82 - - - - - - 0.820 - - -
98. SFPQ ENSGALG00000002514 66832 0.82 - - - - - - 0.820 - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
99. NDUFA1 ENSGALG00000008613 20410 0.819 - - - - - - 0.819 - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:NCBI gene;Acc:772150]
100. RMI1 ENSGALG00000012592 3750 0.819 - - - - - - 0.819 - - - RecQ mediated genome instability 1 [Source:NCBI gene;Acc:431669]

There are 641 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA