Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRRM3

Gene Name Gene ID Reads Annotation
SRRM3 ENSGALG00000001932 12 serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]











Genes with expression patterns similar to SRRM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRRM3 ENSGALG00000001932 12 4 - - 1.000 1.000 - 1.000 - - - 1.000 serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]
2. GLRB ENSGALG00000009395 9 1.66 - - - 0.896 - - - - - 0.764 glycine receptor beta [Source:HGNC Symbol;Acc:HGNC:4329]
3. COTL1 ENSGALG00000017644 81 1 - - - - - 1.000 - - - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
4. SLCO4C1 ENSGALG00000026768 30 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
5. TTC34 ENSGALG00000001081 8 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:34297]
6. ENSGALG00000015321 ENSGALG00000015321 18 1 - - - - - 1.000 - - - -
7. HMX2 ENSGALG00000030875 10 1 - - - - - 1.000 - - - - H6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]
8. ATP7B ENSGALG00000017021 7 1 - - - - - 1.000 - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
9. PPFIA2 ENSGALG00000010958 27 1 - - - - - 1.000 - - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
10. KCNC1 ENSGALG00000006220 15 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
11. gga-let-7i ENSGALG00000018237 2 1 - - - - - 1.000 - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
12. KIAA1199 KIAA1199 6 1 - - - 1.000 - - - - - -
13. IL-12B IL-12B 14 1 - - - 1.000 - - - - - -
14. DMP1 ENSGALG00000010927 5 1 - - - - - 1.000 - - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
15. TMEM8C ENSGALG00000021520 30 1 - - - - - 1.000 - - - - Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
16. ENSGALG00000020349 ENSGALG00000020349 10 1 - - - - - 1.000 - - - -
17. SLC26A11 ENSGALG00000007018 7 1 - - - - - 1.000 - - - - solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
18. TOX3 ENSGALG00000034649 54 1 - - - - - 1.000 - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
19. TSSK3 4 1 - - - - - 1.000 - - - - testis specific serine kinase 3
20. ST7L ENSGALG00000001538 5 1 - - - - - 1.000 - - - - suppression of tumorigenicity 7 like [Source:NCBI gene;Acc:395331]
21. TRH ENSGALG00000008490 16 1 - - - - - 1.000 - - - - thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
22. NOXO1 ENSGALG00000005572 14 1 - - - - - 1.000 - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
23. UNC5D ENSGALG00000001608 4 1 - - - 1.000 - - - - - - unc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]
24. STK35 ENSGALG00000036219 0 1 - - - - - 1.000 - - - - serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]
25. LOC100858814 ENSGALG00000028210 3 1 - - - - - 1.000 - - - - adenine phosphoribosyltransferase-like, transcript variant X1
26. BACE1 ENSGALG00000007298 3 1 - - - - - 1.000 - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
27. FAM160A1 ENSGALG00000010090 10 1 - - - 1.000 - - - - - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
28. BANK1 ENSGALG00000012292 17 1 - - - - - 1.000 - - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
29. DIET1 DIET1 1 1 - - - - - 1.000 - - - -
30. OSTN ENSGALG00000007226 33 1 - - - - - 1.000 - - - - osteocrin [Source:NCBI gene;Acc:424907]
31. ENSGALG00000002574 ENSGALG00000002574 3 1 - - - 1.000 - - - - - -
32. ENSGALG00000022715 ENSGALG00000022715 13 1 - - - - - 1.000 - - - -
33. ACRBP 0 1 - - - - - 1.000 - - - - acrosin binding protein
34. FGL1 ENSGALG00000013606 42 1 - - - - - 1.000 - - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
35. HRH1 ENSGALG00000004930 13 1 - - - 1.000 - - - - - - histamine receptor H1 [Source:HGNC Symbol;Acc:HGNC:5182]
36. MYO18B ENSGALG00000045218 7 1 - - - 1.000 - - - - - - myosin XVIIIB [Source:HGNC Symbol;Acc:HGNC:18150]
37. TP63 ENSGALG00000007324 6 1 - - - - - 1.000 - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
38. ENSGALG00000028531 ENSGALG00000028531 2 1 - - - - - 1.000 - - - -
39. MARCO ENSGALG00000012119 5 1 - - - - - 1.000 - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
40. WDR63 ENSGALG00000008696 15 1 - - - - - 1.000 - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
41. GVINP1 ENSGALG00000016556 4 1 - - - - - 1.000 - - - - GTPase, very large interferon inducible pseudogene 1, transcript variant X1
42. SERPINB5 ENSGALG00000012873 24 1 - - - - - 1.000 - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
43. CTSD ENSGALG00000006613 4 1 - - - - - 1.000 - - - - cathepsin D [Source:NCBI gene;Acc:396090]
44. MAPK11 ENSGALG00000040023 15 1 - - - - - 1.000 - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
45. FAM149B1 ENSGALG00000002693 16 1 - - - - - 1.000 - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
46. CHSY1 ENSGALG00000026468 4 1 - - - - - 1.000 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
47. SCARNA23 SCARNA23 2 1 - - - - - 1.000 - - - -
48. CCDC64 CCDC64 2 1 - - - - - 1.000 - - - -
49. KLHL23 ENSGALG00000020737 13 1 - - - - - 1.000 - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
50. DDTNFR23 ENSGALG00000006407 4 1 - - - - - 1.000 - - - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
51. CFUC-TIX CFUC-TIX 1 1 - - - - - 1.000 - - - -
52. ST6GALNAC3 ENSGALG00000009027 17 1 - - - - - 1.000 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
53. P2RX3 ENSGALG00000040479 5 1 - - - - - 1.000 - - - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
54. PAPPA ENSGALG00000007079 6 1 - - - - - 1.000 - - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
55. GPR12 ENSGALG00000017102 4 1 - - - - - 1.000 - - - - G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
56. ENSGALG00000026368 ENSGALG00000026368 1 1 - - - - - 1.000 - - - -
57. FHDC1 ENSGALG00000041054 34 0.998 - - - - - 0.998 - - - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
58. TSPAN18 ENSGALG00000036901 14 0.987 - - - - - 0.987 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
59. ANKRD31 46 0.985 - - - - - 0.985 - - - - ankyrin repeat domain 31, transcript variant X2
60. GLIS1 ENSGALG00000010721 15 0.984 - - - 0.984 - - - - - - GLIS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:29525]
61. ENSGALG00000018374 ENSGALG00000018374 3 0.977 - - - 0.977 - - - - - -
62. SLC5A7 ENSGALG00000016804 93 0.976 - - - 0.976 - - - - - - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
63. TWF1 ENSGALG00000009595 6 0.955 - - - 0.955 - - - - - - twinfilin actin binding protein 1 [Source:NCBI gene;Acc:417797]
64. ENSGALG00000028298 ENSGALG00000028298 34 0.944 - - - - - 0.944 - - - -
65. MANSC4 32 0.944 - - - - - 0.944 - - - - MANSC domain containing 4, transcript variant X1
66. FAR-2 FAR-2 24 0.943 - - - - - 0.943 - - - -
67. SPIRE2 ENSGALG00000000521 26 0.941 - - - 0.941 - - - - - - spire type actin nucleation factor 2 [Source:HGNC Symbol;Acc:HGNC:30623]
68. UNC13B ENSGALG00000002165 3 0.94 - - - 0.940 - - - - - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
69. TNNC2 ENSGALG00000006835 2963 0.935 - - - - - 0.935 - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
70. CD109 ENSGALG00000015910 11 0.928 - - - - - 0.928 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
71. HYAL2 ENSGALG00000002138 237 0.925 - - - 0.925 - - - - - - hyaluronoglucosaminidase 2 [Source:HGNC Symbol;Acc:HGNC:5321]
72. ZMAT1 ZMAT1 12 0.925 - - - 0.925 - - - - - -
73. TMEM132E ENSGALG00000002312 16 0.91 - - - - - 0.910 - - - - transmembrane protein 132E [Source:HGNC Symbol;Acc:HGNC:26991]
74. VSTM5 ENSGALG00000017217 3 0.907 - - - 0.907 - - - - - - V-set and transmembrane domain containing 5 [Source:HGNC Symbol;Acc:HGNC:34443]
75. SPEF2 ENSGALG00000023552 23 0.904 - - - 0.904 - - - - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
76. TRAPPC3L ENSGALG00000028539 19 0.9 - - - 0.900 - - - - - - trafficking protein particle complex 3 like [Source:HGNC Symbol;Acc:HGNC:21090]
77. WNT7B ENSGALG00000036255 3343 0.897 - - - - - 0.897 - - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
78. LNPEP ENSGALG00000015301 13 0.895 - - - 0.895 - - - - - - leucyl and cystinyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:6656]
79. CBX7 ENSGALG00000041236 14 0.888 - - - - - 0.888 - - - - chromobox 7 [Source:HGNC Symbol;Acc:HGNC:1557]
80. ENSGALG00000019077 ENSGALG00000019077 49 0.878 - - - - - 0.878 - - - -
81. LRRC32 9 0.874 - - 0.874 - - - - - - - leucine rich repeat containing 32
82. SH2D4B ENSGALG00000002370 10 0.868 - - - - - 0.868 - - - - SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
83. CLMN ENSGALG00000030719 60 0.852 - - - - - 0.852 - - - - calmin [Source:HGNC Symbol;Acc:HGNC:19972]
84. MAP3K7CL ENSGALG00000015822 65 0.845 - - 0.845 - - - - - - - MAP3K7 C-terminal like [Source:HGNC Symbol;Acc:HGNC:16457]
85. ABLIM2 ENSGALG00000043448 48 0.844 - - - - - - - - - 0.844 actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
86. ATHL1 ATHL1 16 0.843 - - - - - 0.843 - - - -
87. INA ENSGALG00000028238 208 0.837 - - - 0.837 - - - - - - internexin neuronal intermediate filament protein alpha
88. SYCP1 ENSGALG00000002511 13 0.837 - - - - - 0.837 - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
89. SNORA28 SNORA28 12 0.837 - - - - - 0.837 - - - -
90. SUB1L1 ENSGALG00000027147 73 0.837 - - - - - 0.837 - - - - SUB1 homolog (S. cerevisiae)-like 1
91. MEGF6L ENSGALG00000009458 14 0.836 - - - - - 0.836 - - - - multiple EGF-like-domains 6-like, transcript variant X21
92. RNF25 ENSGALG00000011375 51 0.832 - - - 0.832 - - - - - - ring finger protein 25 [Source:NCBI gene;Acc:424211]
93. HMGI-C HMGI-C 34 0.831 - - - - - 0.831 - - - -
94. UNC45B ENSGALG00000002186 399 0.829 - - - - - 0.829 - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
95. IPP ENSGALG00000010287 2 0.826 - - 0.826 - - - - - - - intracisternal A particle-promoted polypeptide [Source:HGNC Symbol;Acc:HGNC:6108]
96. HIVEP3 ENSGALG00000027365 10 0.818 - - - 0.818 - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
97. GIPC2 ENSGALG00000008902 6 0.817 - - - - - 0.817 - - - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
98. ARSE ENSGALG00000016654 8 0.817 - - - - - 0.817 - - - - arylsulfatase E (chondrodysplasia punctata 1), transcript variant X2
99. SGCD ENSGALG00000003886 27 0.817 - - - - - 0.817 - - - - sarcoglycan delta [Source:HGNC Symbol;Acc:HGNC:10807]
100. SLC44A1 ENSGALG00000015439 32 0.817 - - - - - 0.817 - - - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]

There are 89 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA