Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPIRE1

Gene Name Gene ID Reads Annotation
SPIRE1 ENSGALG00000013817 155 spire type actin nucleation factor 1 [Source:HGNC Symbol;Acc:HGNC:30622]











Genes with expression patterns similar to SPIRE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPIRE1 ENSGALG00000013817 155 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spire type actin nucleation factor 1 [Source:HGNC Symbol;Acc:HGNC:30622]
2. AGRP ENSGALG00000002244 27 1.711 - - - - - - - 0.973 - 0.738 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
3. DPH1 ENSGALG00000003082 5 1.7 - - - - - 0.863 - 0.837 - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
4. TDRD5 ENSGALG00000033634 40 1.681 - - - - 0.818 0.863 - - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
5. ST6GAL2 ENSGALG00000016803 24 1.627 - - - - - 0.863 - 0.764 - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
6. DLX3 ENSGALG00000040529 37 1.558 - - - - - - - 0.787 - 0.771 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
7. JPH3 ENSGALG00000029424 65 1.557 - - 0.733 - - 0.824 - - - - junctophilin 3 [Source:HGNC Symbol;Acc:HGNC:14203]
8. ACSS1 ENSGALG00000008632 397 1.436 - - 0.709 - - - - - - 0.727 acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
9. DCLRE1C ENSGALG00000013926 34 0.965 - - - - - - - 0.965 - - DNA cross-link repair 1C [Source:NCBI gene;Acc:430764]
10. DGKQ ENSGALG00000002142 31 0.957 - - - - - 0.957 - - - - diacylglycerol kinase theta [Source:HGNC Symbol;Acc:HGNC:2856]
11. ENSGALG00000011799 ENSGALG00000011799 37 0.949 - - - - - 0.949 - - - -
12. CRDS2 CRDS2 22 0.925 - - - - - - - - 0.925 -
13. ENSGALG00000025953 ENSGALG00000025953 65 0.886 - - - - - - - 0.886 - -
14. CTNNA2 ENSGALG00000027853 452 0.879 - - - - - - - 0.879 - - catenin alpha 2 [Source:NCBI gene;Acc:396035]
15. SNORA40 SNORA40 12 0.874 - - - - - 0.874 - - - -
16. TRIM63 ENSGALG00000034107 524 0.874 - - - - - - - - 0.874 - tripartite motif containing 63 [Source:HGNC Symbol;Acc:HGNC:16007]
17. ENPP4 ENSGALG00000016708 18 0.87 - - - - - - - 0.870 - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
18. SLC35D3 ENSGALG00000030545 55 0.867 - - - - - - - 0.867 - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
19. ENSGALG00000021706 ENSGALG00000021706 186 0.864 - - - - - - - - 0.864 -
20. KNDC1 ENSGALG00000007007 31 0.863 - - - - - 0.863 - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
21. LARGE LARGE 3 0.863 - - - - - 0.863 - - - -
22. SRGN ENSGALG00000004167 77 0.863 - - - - - 0.863 - - - - serglycin [Source:HGNC Symbol;Acc:HGNC:9361]
23. ENSGALG00000023460 ENSGALG00000023460 0 0.863 - - - - - 0.863 - - - -
24. TECRL ENSGALG00000038771 126 0.863 - - - - - 0.863 - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
25. NOX2 NOX2 2 0.863 - - - - - 0.863 - - - -
26. TTC7B ENSGALG00000010680 4 0.863 - - - - - 0.863 - - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
27. SPARCL1 ENSGALG00000010929 10 0.863 - - - - - 0.863 - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
28. KLHL25 ENSGALG00000006826 2 0.863 - - - - - 0.863 - - - - kelch like family member 25 [Source:HGNC Symbol;Acc:HGNC:25732]
29. CNTNAP4 ENSGALG00000023179 13 0.863 - - - - - 0.863 - - - - contactin associated protein like 4
30. SUSD5 ENSGALG00000042289 1 0.863 - - - - - 0.863 - - - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
31. RNase RNase 15 0.863 - - - - - 0.863 - - - -
32. ENSGALG00000013912 ENSGALG00000013912 3 0.863 - - - - - 0.863 - - - -
33. MAPK8IP1 2 0.863 - - - - - 0.863 - - - - mitogen-activated protein kinase 8 interacting protein 1, transcript variant X1
34. GAS2L1 ENSGALG00000036731 2 0.863 - - - - - 0.863 - - - - growth arrest specific 2 like 1 [Source:HGNC Symbol;Acc:HGNC:16955]
35. PCGF5 ENSGALG00000006502 2 0.863 - - - - - 0.863 - - - - polycomb group ring finger 5 [Source:NCBI gene;Acc:423796]
36. ENSGALG00000017391 ENSGALG00000017391 12 0.863 - - - - - 0.863 - - - -
37. PROM2 ENSGALG00000041347 6 0.863 - - - - - 0.863 - - - - prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]
38. SCRT2 ENSGALG00000028912 0 0.863 - - - - - 0.863 - - - - scratch family transcriptional repressor 2 [Source:NCBI gene;Acc:100379662]
39. LAG3 ENSGALG00000044449 0 0.863 - - - - - 0.863 - - - - lymphocyte activating 3, transcript variant X1
40. KLHL33 ENSGALG00000027742 18 0.863 - - - - - 0.863 - - - - kelch like family member 33, transcript variant X2
41. CCDC157 ENSGALG00000007907 10 0.863 - - - - - 0.863 - - - - coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
42. CCDC85C 2 0.863 - - - - - 0.863 - - - - coiled-coil domain containing 85C, transcript variant X1
43. PRA1 PRA1 2 0.863 - - - - - 0.863 - - - -
44. IGJ IGJ 26 0.863 - - - - - 0.863 - - - -
45. SNTN ENSGALG00000007288 0 0.863 - - - - - 0.863 - - - - sentan, cilia apical structure protein [Source:NCBI gene;Acc:416076]
46. ENSGALG00000019864 ENSGALG00000019864 4 0.863 - - - - - 0.863 - - - -
47. PFKFB2 ENSGALG00000001117 2 0.863 - - - - - 0.863 - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
48. ENSGALG00000028416 ENSGALG00000028416 11 0.863 - - - - - 0.863 - - - -
49. EML5 ENSGALG00000010639 25 0.863 - - - - - 0.863 - - - - echinoderm microtubule associated protein like 5, transcript variant X1
50. ENSGALG00000004511 ENSGALG00000004511 2 0.863 - - - - - 0.863 - - - -
51. CNNM2 ENSGALG00000008160 3 0.863 - - - - - 0.863 - - - - cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
52. VPS29L ENSGALG00000005951 31 0.863 - - - - - 0.863 - - - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
53. STEAP2 ENSGALG00000009017 10 0.863 - - - - - 0.863 - - - - STEAP2 metalloreductase [Source:HGNC Symbol;Acc:HGNC:17885]
54. GGGT5L ENSGALG00000013762 0 0.863 - - - - - 0.863 - - - - protein-glutamine gamma-glutamyltransferase 5-like
55. GABRA2 ENSGALG00000014206 19 0.863 - - - - - 0.863 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
56. MEGF11 ENSGALG00000007631 0 0.863 - - - - - 0.863 - - - - multiple EGF like domains 11 [Source:HGNC Symbol;Acc:HGNC:29635]
57. RBL2 ENSGALG00000003663 10 0.863 - - - - - 0.863 - - - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
58. ANKRD44 ENSGALG00000007996 17 0.863 - - - - - 0.863 - - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
59. PHF19 ENSGALG00000001595 1 0.863 - - - - - 0.863 - - - - PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]
60. ADAMTS7 7 0.863 - - - - - 0.863 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 7
61. PDLIM3 ENSGALG00000013414 52 0.863 - - - - - 0.863 - - - - PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]
62. ADRA2C ENSGALG00000015608 42 0.863 - - - - - 0.863 - - - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
63. ENSGALG00000021838 ENSGALG00000021838 0 0.863 - - - - - 0.863 - - - -
64. ENSGALG00000005960 ENSGALG00000005960 3 0.863 - - - - - 0.863 - - - -
65. GALNT10 ENSGALG00000004033 3 0.863 - - - - - 0.863 - - - - polypeptide N-acetylgalactosaminyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19873]
66. ANKRD34B ENSGALG00000044727 9 0.863 - - - - - 0.863 - - - - ankyrin repeat domain 34B [Source:HGNC Symbol;Acc:HGNC:33736]
67. FAM109B 1 0.863 - - - - - 0.863 - - - - family with sequence similarity 109 member B
68. LURAP1 ENSGALG00000031467 0 0.863 - - - - - 0.863 - - - - leucine rich adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:32327]
69. RBP1 ENSGALG00000037875 7 0.863 - - - - - 0.863 - - - - retinol binding protein 1 [Source:NCBI gene;Acc:424821]
70. AGBL1 ENSGALG00000006819 7 0.863 - - - - - 0.863 - - - - ATP/GTP binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:26504]
71. IMPG1 ENSGALG00000015897 4 0.863 - - - - - 0.863 - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
72. STS ENSGALG00000016622 11 0.863 - - - - - 0.863 - - - - steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
73. KCTD15 ENSGALG00000004907 8 0.863 - - - - - 0.863 - - - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
74. SNORA41 SNORA41 4 0.863 - - - - - 0.863 - - - -
75. LOC395381 ENSGALG00000006717 10 0.863 - - - - - 0.863 - - - - ovomucin, alpha subunit, transcript variant X4
76. KLF13 ENSGALG00000026590 13 0.863 - - - - - 0.863 - - - - Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
77. ENSGALG00000001694 ENSGALG00000001694 3 0.863 - - - - - 0.863 - - - -
78. SLC15A1 ENSGALG00000016884 10 0.863 - - - - - 0.863 - - - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
79. SLCO1B1 ENSGALG00000019276 7 0.863 - - - - - 0.863 - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
80. WDR64 ENSGALG00000010760 1 0.863 - - - - - 0.863 - - - - WD repeat domain 64 [Source:HGNC Symbol;Acc:HGNC:26570]
81. ATG14 ENSGALG00000012148 2 0.863 - - - - - 0.863 - - - - autophagy related 14 [Source:HGNC Symbol;Acc:HGNC:19962]
82. SP5 ENSGALG00000034094 130 0.863 - - - - - 0.863 - - - - Sp5 transcription factor [Source:NCBI gene;Acc:693261]
83. SORCS2 ENSGALG00000015554 7 0.863 - - - - - 0.863 - - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
84. ENSGALG00000010883 ENSGALG00000010883 10 0.863 - - - - - 0.863 - - - -
85. SCN3A ENSGALG00000011040 62 0.863 - - - - - 0.863 - - - - sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
86. LOC100859850 ENSGALG00000000803 3 0.863 - - - - - 0.863 - - - - lisH domain-containing protein C1711.05-like
87. TRMT61A ENSGALG00000011522 14 0.863 - - - - - 0.863 - - - - tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
88. THSD7B ENSGALG00000012362 8 0.863 - - - - - 0.863 - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
89. TRIM42 ENSGALG00000005286 2 0.863 - - - - - 0.863 - - - - tripartite motif containing 42 [Source:HGNC Symbol;Acc:HGNC:19014]
90. STXBP1 ENSGALG00000040003 157 0.863 - - - - - 0.863 - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
91. D2HGDH ENSGALG00000039535 3 0.863 - - - - - 0.863 - - - - D-2-hydroxyglutarate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:28358]
92. TMEM179 ENSGALG00000011590 0 0.863 - - - - - 0.863 - - - - transmembrane protein 179 [Source:NCBI gene;Acc:423491]
93. ENSGALG00000022812 ENSGALG00000022812 0 0.863 - - - - - 0.863 - - - -
94. KLHL12 ENSGALG00000000518 5 0.863 - - - - - 0.863 - - - - kelch like family member 12 [Source:HGNC Symbol;Acc:HGNC:19360]
95. LRIT3 ENSGALG00000026627 6 0.863 - - - - - 0.863 - - - - leucine rich repeat, Ig-like and transmembrane domains 3 [Source:HGNC Symbol;Acc:HGNC:24783]
96. ICOS ENSGALG00000008656 27 0.863 - - - - - 0.863 - - - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
97. ENSGALG00000019428 ENSGALG00000019428 1 0.863 - - - - - 0.863 - - - -
98. TROJANZ ENSGALG00000027747 37 0.863 - - - - - 0.863 - - - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
99. RASGRP1 ENSGALG00000009740 15 0.863 - - - - - 0.863 - - - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
100. GJA3 ENSGALG00000017137 0 0.863 - - - - - 0.863 - - - - gap junction protein alpha 3 [Source:NCBI gene;Acc:428084]

There are 231 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA