Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNRB

Gene Name Gene ID Reads Annotation
SNRB SNRB 4477











Genes with expression patterns similar to SNRB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNRB SNRB 4477 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. LPCAT3 ENSGALG00000014570 7919 1.637 - - 0.919 - - - - 0.718 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
3. URM1 ENSGALG00000004971 17880 1.603 - - 0.888 - - - - 0.715 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
4. SLC12A4 ENSGALG00000034179 5674 1.589 - - 0.866 - - - - 0.723 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
5. TIMMDC1 ENSGALG00000024480 9337 1.573 - - 0.804 - - - - 0.769 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
6. GEMIN4 ENSGALG00000004817 3596 1.555 - - 0.842 - - - 0.713 - - - gem nuclear organelle associated protein 4 [Source:NCBI gene;Acc:427835]
7. WSB2 ENSGALG00000008151 13246 1.548 - - 0.840 - - - - 0.708 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
8. CHMP4B ENSGALG00000002095 17422 1.517 - - 0.795 - - - - 0.722 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
9. ACTR8 ENSGALG00000005385 3647 1.516 - - 0.805 - - - - 0.711 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
10. PANK1 ENSGALG00000006431 2910 1.49 - - 0.777 - - - - 0.713 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
11. ESRP2 ENSGALG00000003374 4436 1.461 - - 0.726 - - - - 0.735 - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
12. ARFIP1 ENSGALG00000041361 7351 1.458 - - 0.739 - - - - 0.719 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
13. NUP37 ENSGALG00000012759 9985 1.453 - - 0.723 - - - - - 0.730 - nucleoporin 37 [Source:NCBI gene;Acc:418093]
14. DDX6 ENSGALG00000033064 2193 0.96 - - 0.960 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
15. ATP6V0A2 ENSGALG00000003194 4824 0.957 - - 0.957 - - - - - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
16. WDR92 ENSGALG00000008760 3934 0.954 - - 0.954 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
17. CLEC16A ENSGALG00000007167 66 0.953 - - 0.953 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
18. RRN3 ENSGALG00000041989 3934 0.953 - - 0.953 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
19. TRIM13 ENSGALG00000017011 92 0.952 - - 0.952 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
20. ABCC3 ENSGALG00000007522 340 0.951 - - 0.951 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
21. MRC2 ENSGALG00000000461 48 0.95 - - 0.950 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
22. L3MBTL3 ENSGALG00000034030 113 0.95 - - 0.950 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
23. TDRD6 48 0.95 - - 0.950 - - - - - - - tudor domain containing 6
24. RQCD1 RQCD1 110 0.95 - - 0.950 - - - - - - -
25. MED12 ENSGALG00000036322 814 0.95 - - 0.950 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
26. ITGB4 ENSGALG00000002389 44 0.95 - - 0.950 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
27. ENSGALG00000004703 ENSGALG00000004703 112 0.95 - - 0.950 - - - - - - -
28. ENSGALG00000028964 ENSGALG00000028964 46 0.949 - - 0.949 - - - - - - -
29. F2R ENSGALG00000014983 106 0.949 - - 0.949 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
30. UEVLD ENSGALG00000006342 164 0.949 - - 0.949 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
31. ENSGALG00000020103 ENSGALG00000020103 64 0.948 - - 0.948 - - - - - - -
32. U4 U4 69 0.948 - - 0.948 - - - - - - -
33. RPS6KB1 ENSGALG00000005198 169 0.948 - - 0.948 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
34. PTDSS2 ENSGALG00000004300 682 0.948 - - 0.948 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
35. NXPE3 ENSGALG00000015344 111 0.948 - - 0.948 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
36. SZT2 ENSGALG00000028561 255 0.948 - - 0.948 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
37. FAM134C 860 0.948 - - 0.948 - - - - - - - family with sequence similarity 134 member C
38. WHSC1 1712 0.947 - - 0.947 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
39. ENSGALG00000002020 ENSGALG00000002020 183 0.947 - - 0.947 - - - - - - -
40. SLC3A1 ENSGALG00000009973 608 0.947 - - 0.947 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
41. DBN1 ENSGALG00000033405 216 0.946 - - 0.946 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
42. LRRC71 ENSGALG00000027351 695 0.946 - - 0.946 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
43. CHAMP1 ENSGALG00000016813 508 0.946 - - 0.946 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
44. AKAP10 ENSGALG00000004679 103 0.946 - - 0.946 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
45. CDC14B ENSGALG00000012627 110 0.946 - - 0.946 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
46. SMARCAD1 ENSGALG00000037339 149 0.946 - - 0.946 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
47. RAD54L2 ENSGALG00000003243 187 0.945 - - 0.945 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
48. OSGIN2 ENSGALG00000042840 83 0.945 - - 0.945 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
49. KCTD3 ENSGALG00000009678 335 0.945 - - 0.945 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
50. TUBGCP3 ENSGALG00000016836 332 0.944 - - 0.944 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
51. LRRC42 ENSGALG00000010743 384 0.944 - - 0.944 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
52. BBS5 ENSGALG00000009846 344 0.944 - - 0.944 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
53. SMOC2 ENSGALG00000011205 340 0.944 - - 0.944 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
54. ARRDC4 ENSGALG00000007012 1039 0.943 - - 0.943 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
55. FBXL5 ENSGALG00000014510 245 0.943 - - 0.943 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
56. ITM2B ENSGALG00000016996 1112 0.943 - - 0.943 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
57. DUSP19 ENSGALG00000043268 5543 0.942 - - 0.942 - - - - - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
58. GDPD4 ENSGALG00000000690 824 0.942 - - 0.942 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
59. PRUNE PRUNE 452 0.942 - - 0.942 - - - - - - -
60. GTF2H2 ENSGALG00000002399 2361 0.942 - - 0.942 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
61. PCDH17 ENSGALG00000016941 1006 0.94 - - 0.940 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
62. NACAD 679 0.939 - - 0.939 - - - - - - - NAC alpha domain containing, transcript variant X1
63. TTPAL ENSGALG00000004244 2734 0.939 - - 0.939 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
64. IQCD ENSGALG00000037307 642 0.939 - - 0.939 - - - - - - - IQ motif containing D, transcript variant X2
65. NGF ENSGALG00000002556 122 0.939 - - 0.939 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
66. ENSGALG00000004931 ENSGALG00000004931 2737 0.938 - - 0.938 - - - - - - -
67. ENSGALG00000008689 ENSGALG00000008689 232 0.938 - - 0.938 - - - - - - -
68. TCTN2 ENSGALG00000023683 3596 0.938 - - 0.938 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
69. AASDHPPT ENSGALG00000027981 1017 0.937 - - 0.937 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
70. ABCE1 ENSGALG00000009961 958 0.936 - - 0.936 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
71. BBX ENSGALG00000015353 1281 0.936 - - 0.936 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
72. ATP8B4 ENSGALG00000002326 456 0.936 - - 0.936 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
73. REXO2 ENSGALG00000035980 16319 0.935 - - 0.935 - - - - - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
74. ADK ENSGALG00000005057 199 0.935 - - 0.935 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
75. SLC37A3 ENSGALG00000012849 836 0.935 - - 0.935 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
76. LXR LXR 2599 0.932 - - 0.932 - - - - - - -
77. NCAPD2 ENSGALG00000039448 8658 0.932 - - 0.932 - - - - - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
78. CEP104 ENSGALG00000000978 1130 0.931 - - 0.931 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
79. UBR2 ENSGALG00000009906 7717 0.931 - - 0.931 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
80. AMFR ENSGALG00000003107 6560 0.931 - - 0.931 - - - - - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
81. CHGA ENSGALG00000010820 1028 0.931 - - 0.931 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
82. IFT81 ENSGALG00000003854 2534 0.931 - - 0.931 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
83. SGCE ENSGALG00000009670 3070 0.93 - - 0.930 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
84. GON4L ENSGALG00000014643 1737 0.929 - - 0.929 - - - - - - - gon-4 like, transcript variant X2
85. GTF2E1 ENSGALG00000042320 7712 0.929 - - 0.929 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
86. APTX ENSGALG00000001954 692 0.929 - - 0.929 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
87. BTBD9 ENSGALG00000010131 1870 0.929 - - 0.929 - - - - - - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
88. MLLT3 ENSGALG00000015078 502 0.929 - - 0.929 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
89. GSDMA ENSGALG00000013495 1650 0.929 - - 0.929 - - - - - - - gasdermin A [Source:NCBI gene;Acc:426132]
90. GGT7 ENSGALG00000001062 476 0.928 - - 0.928 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
91. ERCC3 ENSGALG00000011515 3133 0.928 - - 0.928 - - - - - - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
92. COG7 ENSGALG00000006156 4072 0.927 - - 0.927 - - - - - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
93. CA9 ENSGALG00000021340 1431 0.927 - - 0.927 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
94. PCYT1B 190 0.926 - - 0.926 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
95. RFK ENSGALG00000033558 1364 0.926 - - 0.926 - - - - - - - riboflavin kinase, transcript variant X3
96. GFER ENSGALG00000005579 1367 0.926 - - 0.926 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
97. N4BP2L2 857 0.925 - - 0.925 - - - - - - - NEDD4 binding protein 2 like 2, transcript variant X7
98. SESN1 ENSGALG00000015286 2387 0.925 - - 0.925 - - - - - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
99. TMEM242 ENSGALG00000013689 377 0.924 - - 0.924 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
100. SETD1B ENSGALG00000004324 2897 0.923 - - 0.923 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]

There are 482 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA