Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMARCD2

Gene Name Gene ID Reads Annotation
SMARCD2 ENSGALG00000029304 11867 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]











Genes with expression patterns similar to SMARCD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMARCD2 ENSGALG00000029304 11867 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
2. NUP133 ENSGALG00000011091 3804 1.795 - - - - - - 0.999 - 0.796 - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
3. OAZ2 ENSGALG00000036288 13213 1.766 - - - - - - 0.998 0.768 - - Gallus gallus ornithine decarboxylase antizyme 2 (OAZ2), mRNA. [Source:RefSeq mRNA;Acc:NM_001142862]
4. MIPEP ENSGALG00000017118 8666 1.719 - - 0.721 - - - 0.998 - - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
5. SMPDL3B ENSGALG00000000737 223 1.686 - - - - - - - 0.883 0.803 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
6. CHCHD6 ENSGALG00000006056 6121 1.65 - - 0.738 - - - - 0.912 - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
7. CLCN7 ENSGALG00000030826 3173 1.634 - - - - - - - 0.907 0.727 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
8. CEP70 ENSGALG00000012087 7992 1.616 - - 0.809 - - - - - 0.807 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
9. DLG3 ENSGALG00000041900 3016 1.524 - - 0.707 - - - - - 0.817 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
10. PDCD4 ENSGALG00000008700 574 1.503 - - 0.712 - - - - - 0.791 - programmed cell death 4 [Source:NCBI gene;Acc:374191]
11. RWDD3 ENSGALG00000038421 10909 0.999 - - - - - - 0.999 - - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
12. IFT57 ENSGALG00000015356 5540 0.999 - - - - - - 0.999 - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
13. NUP188 ENSGALG00000043394 9288 0.999 - - - - - - 0.999 - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
14. KDM4B ENSGALG00000034592 6711 0.999 - - - - - - 0.999 - - - lysine demethylase 4B, transcript variant X8
15. SP4 ENSGALG00000039454 5597 0.999 - - - - - - 0.999 - - - Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
16. ANAPC2 ENSGALG00000008625 8822 0.998 - - - - - - 0.998 - - - anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
17. SSR2 ENSGALG00000000764 32190 0.998 - - - - - - 0.998 - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
18. MSH6 ENSGALG00000008957 6396 0.998 - - - - - - 0.998 - - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
19. NDUFS5 ENSGALG00000003625 27698 0.998 - - - - - - 0.998 - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
20. RBPMS_1 ENSGALG00000010291 16146 0.998 - - - - - - 0.998 - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
21. AMFR ENSGALG00000003107 6560 0.998 - - - - - - 0.998 - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
22. FBXL21 ENSGALG00000006327 2910 0.998 - - - - - - 0.998 - - - F-box and leucine rich repeat protein 21 [Source:NCBI gene;Acc:416306]
23. HIBCH ENSGALG00000043307 11990 0.998 - - - - - - 0.998 - - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
24. RNF126 ENSGALG00000042948 4724 0.998 - - - - - - 0.998 - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
25. EMC1 ENSGALG00000003969 6876 0.998 - - - - - - 0.998 - - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
26. ZNF384 ENSGALG00000032599 2369 0.998 - - - - - - 0.998 - - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
27. MAMDC2 ENSGALG00000015115 1512 0.998 - - - - - - 0.998 - - - MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
28. AP1G1 12403 0.998 - - - - - - 0.998 - - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
29. NUP153 ENSGALG00000012720 8079 0.998 - - - - - - 0.998 - - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
30. PSMD14 ENSGALG00000011128 13335 0.998 - - - - - - 0.998 - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
31. SPAG1 ENSGALG00000033254 1370 0.998 - - - - - - 0.998 - - - sperm associated antigen 1 [Source:HGNC Symbol;Acc:HGNC:11212]
32. SLC12A4 ENSGALG00000034179 5674 0.998 - - - - - - 0.998 - - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
33. MEX3A ENSGALG00000014016 3692 0.998 - - - - - - 0.998 - - - mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
34. ZNF367 ENSGALG00000012629 3215 0.998 - - - - - - 0.998 - - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
35. USP9X ENSGALG00000016236 9419 0.997 - - - - - - 0.997 - - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
36. PRIM2 ENSGALG00000016278 5160 0.997 - - - - - - 0.997 - - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
37. TCF21 ENSGALG00000029024 8252 0.997 - - - - - - 0.997 - - - transcription factor 21 [Source:NCBI gene;Acc:421697]
38. BTBD1 ENSGALG00000006020 14157 0.997 - - - - - - 0.997 - - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
39. FAM174A ENSGALG00000026203 8369 0.997 - - - - - - 0.997 - - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
40. CDH3 5050 0.997 - - - - - - 0.997 - - - cadherin 3
41. SPC25 ENSGALG00000010900 14238 0.997 - - - - - - 0.997 - - - SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
42. NTPCR ENSGALG00000011015 8652 0.997 - - - - - - 0.997 - - - nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
43. MRPL21 ENSGALG00000004362 20796 0.996 - - - - - - 0.996 - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
44. NANS ENSGALG00000015320 10552 0.996 - - - - - - 0.996 - - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
45. HOXB2 ENSGALG00000025774 5280 0.995 - - - - - - 0.995 - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
46. ACVR1 ENSGALG00000037301 6448 0.994 - - - - - - 0.994 - - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
47. HOXA4 ENSGALG00000022622 22327 0.991 - - - - - - 0.991 - - - homeobox A4 [Source:NCBI gene;Acc:395307]
48. NDUFB5 ENSGALG00000009076 32963 0.987 - - - - - - 0.987 - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
49. ZC3H15 ENSGALG00000041857 19808 0.984 - - - - - - 0.984 - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
50. THG1L ENSGALG00000003722 7497 0.982 - - - - - - 0.982 - - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
51. ERLIN2 ENSGALG00000003092 18251 0.98 - - - - - - 0.980 - - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
52. EIF3A ENSGALG00000009328 39982 0.979 - - - - - - 0.979 - - - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
53. AKAP12 ENSGALG00000036240 64617 0.976 - - - - - - 0.976 - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
54. PPP2CA ENSGALG00000006462 26306 0.974 - - - - - - 0.974 - - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
55. COX6A1 ENSGALG00000007205 72629 0.954 - - - - - - 0.954 - - - cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
56. CENPI ENSGALG00000005038 2608 0.935 - - - - - - - 0.935 - - centromere protein I [Source:NCBI gene;Acc:395207]
57. TTPAL ENSGALG00000004244 2734 0.935 - - - - - - - 0.935 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
58. ENSGALG00000009863 ENSGALG00000009863 7375 0.931 - - - - - - - 0.931 - -
59. USP12P1 USP12P1 4193 0.927 - - - - - - - 0.927 - -
60. CNEP1R1 ENSGALG00000029793 6536 0.927 - - - - - - - 0.927 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
61. AP3D1 ENSGALG00000000996 16143 0.925 - - - - - - - 0.925 - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
62. GNPAT ENSGALG00000011163 4286 0.922 - - - - - - - 0.922 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
63. SIPA1L2 ENSGALG00000037506 3651 0.921 - - - - - - - 0.921 - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
64. GTF2H4 GTF2H4 5227 0.921 - - - - - - - 0.921 - -
65. TRIP11 ENSGALG00000010763 3146 0.92 - - - - - - - 0.920 - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
66. PARPBP ENSGALG00000012756 1895 0.918 - - - - - - - 0.918 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
67. TMEM33 ENSGALG00000014248 6069 0.918 - - - - - - - 0.918 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
68. STX16 ENSGALG00000007541 6458 0.917 - - - - - - - 0.917 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
69. ATAD2 ENSGALG00000034348 4440 0.917 - - - - - - - 0.917 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
70. PDGF-A PDGF-A 5166 0.917 - - - - - - - 0.917 - -
71. PLA2G12A ENSGALG00000012185 5261 0.916 - - - - - - - 0.916 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
72. OSR1 ENSGALG00000016473 1202 0.916 - - - - - - - 0.916 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
73. MKP3 MKP3 4418 0.915 - - - - - - - 0.915 - -
74. CHMP2B ENSGALG00000015496 3973 0.914 - - - - - - - 0.914 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
75. LSMD1 LSMD1 2562 0.913 - - - - - - - 0.913 - -
76. ZBTB24 ENSGALG00000015231 1384 0.913 - - - - - - - 0.913 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
77. ENSGALG00000017324 ENSGALG00000017324 8235 0.912 - - - - - - - 0.912 - -
78. PPM1B ENSGALG00000030691 4513 0.911 - - - - - - - 0.911 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
79. TST ENSGALG00000012488 5314 0.911 - - - - - - - 0.911 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
80. GOLPH3 ENSGALG00000028267 9692 0.91 - - - - - - - 0.910 - - golgi phosphoprotein 3, transcript variant X1
81. MICU1 ENSGALG00000004372 1978 0.91 - - - - - - - 0.910 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
82. TAF1B ENSGALG00000016437 2318 0.91 - - - - - - - 0.910 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
83. SNTB1 ENSGALG00000034528 3907 0.91 - - - - - - - 0.910 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
84. SURF1 ENSGALG00000033754 2130 0.91 - - - - - - - 0.910 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
85. RPS6KA RPS6KA 6745 0.91 - - - - - - - 0.910 - -
86. NUDT4 ENSGALG00000011285 2998 0.909 - - - - - - - 0.909 - - nudix hydrolase 4, transcript variant X5
87. ZNF598 ENSGALG00000005598 8270 0.908 - - - - - - - 0.908 - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
88. KIF25 ENSGALG00000011299 2601 0.908 - - - - - - - 0.908 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
89. CUL5 ENSGALG00000017165 2480 0.908 - - - - - - - 0.908 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
90. POLD3 ENSGALG00000017307 2136 0.907 - - - - - - - 0.907 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
91. CLUAP1 ENSGALG00000030877 4269 0.905 - - - - - - - 0.905 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
92. LGALS1_1 ENSGALG00000012420 1560 0.905 - - - - - - - 0.905 - - galectin 1 [Source:NCBI gene;Acc:396491]
93. gga-mir-1737 ENSGALG00000025206 3910 0.905 - - - - - - - 0.905 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
94. C10ORF58 C10ORF58 5045 0.905 - - - - - - - 0.905 - -
95. DMTF1 ENSGALG00000030844 3584 0.905 - - - - - - - 0.905 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
96. PRRG1 ENSGALG00000016266 3473 0.904 - - - - - - - 0.904 - - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
97. SERINC1 ENSGALG00000014868 12484 0.904 - - - - - - - 0.904 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
98. NAPEPLD ENSGALG00000008285 1295 0.903 - - - - - - - 0.903 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
99. POLR1C ENSGALG00000010349 7059 0.902 - - - - - - - 0.902 - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
100. ENSGALG00000014375 ENSGALG00000014375 4741 0.901 - - - - - - - 0.901 - -

There are 306 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA