Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMARCA5

Gene Name Gene ID Reads Annotation
SMARCA5 ENSGALG00000009913 20059 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]











Genes with expression patterns similar to SMARCA5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMARCA5 ENSGALG00000009913 20059 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
2. HNRNPLL ENSGALG00000008504 14719 1.666 - - - - - - - 0.876 - 0.790 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
3. DCAF12 ENSGALG00000005800 6419 1.614 - - - - - - 0.721 0.893 - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
4. NUTF2 ENSGALG00000001602 32832 1.566 - - - - 0.717 - 0.849 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
5. TSPAN5 ENSGALG00000012227 8703 1.533 - - - - - - 0.755 0.778 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
6. FAM160B1 ENSGALG00000031404 3153 1.532 - - - - - - 0.774 0.758 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
7. POLR1E ENSGALG00000005395 8953 1.504 - - - - - - 0.745 0.759 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
8. BOC ENSGALG00000015152 4868 1.483 - - - - - 0.726 - 0.757 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
9. NKRF ENSGALG00000008645 3531 1.473 - - - - - - 0.705 0.768 - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
10. THAP5 ENSGALG00000009494 6540 1.469 - - 0.745 - - - 0.724 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
11. ARG2 ENSGALG00000009519 19523 1.46 - - 0.747 - - - - - - 0.713 arginase 2 [Source:NCBI gene;Acc:423272]
12. LPCAT3 ENSGALG00000014570 7919 1.442 - - 0.707 - - - 0.735 - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
13. CHGA ENSGALG00000010820 1028 1.432 - - 0.704 - - - - 0.728 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
14. HSD17B12 ENSGALG00000036787 11748 1.418 - - - - - - - 0.708 - 0.710 hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
15. EIF2S1 ENSGALG00000009565 63906 0.9 - - - - - - 0.900 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
16. THRAP3 ENSGALG00000002144 21958 0.899 - - - - - - 0.899 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
17. PPP1R7 ENSGALG00000031766 22187 0.895 - - - - - - 0.895 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
18. ARL6IP1 ENSGALG00000006780 16471 0.892 - - - - - - 0.892 - - - ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:NCBI gene;Acc:416604]
19. CUL4B ENSGALG00000008559 16864 0.891 - - - - - - 0.891 - - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
20. HMGB2 ENSGALG00000010745 89235 0.886 - - - - - - 0.886 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
21. NDUFA8 ENSGALG00000040987 49453 0.883 - - - - - - 0.883 - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
22. PARP1 ENSGALG00000009228 39433 0.882 - - - - - - 0.882 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
23. ELK3 ENSGALG00000043701 7881 0.877 - - - - - - - 0.877 - - ELK3, ETS transcription factor [Source:NCBI gene;Acc:417919]
24. WDR77 ENSGALG00000040864 3766 0.875 - - - - - - - 0.875 - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]
25. MRPL20 ENSGALG00000001542 28764 0.866 - - - - - - 0.866 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
26. DUT ENSGALG00000038032 34659 0.866 - - - - - - 0.866 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
27. EBNA1BP2 ENSGALG00000009045 17453 0.858 - - - - - - 0.858 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
28. CSE1L ENSGALG00000004707 20653 0.856 - - - - - - 0.856 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
29. ENSGALG00000009044 ENSGALG00000009044 14492 0.852 - - - - - - 0.852 - - -
30. SIVA1 ENSGALG00000011619 15130 0.851 - - - - - - 0.851 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
31. UBE2J2 ENSGALG00000001848 6527 0.845 - - - - - - 0.845 - - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
32. CENPW ENSGALG00000027454 7517 0.844 - - - - - - 0.844 - - - centromere protein W [Source:NCBI gene;Acc:421716]
33. KIF2C ENSGALG00000010120 8999 0.843 - - - - - - 0.843 - - - kinesin family member 2C, transcript variant X1
34. NAA38 ENSGALG00000045783 11229 0.842 - - - - - - 0.842 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
35. SSBP1 ENSGALG00000012876 34256 0.84 - - - - - - 0.840 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
36. GLO1 ENSGALG00000010127 31662 0.839 - - - - - - 0.839 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
37. NDUFA1 ENSGALG00000008613 20410 0.838 - - - - - - 0.838 - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:NCBI gene;Acc:772150]
38. SIKE1 ENSGALG00000002147 20836 0.837 - - - - - - 0.837 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
39. UBE2V1 ENSGALG00000008015 17947 0.836 - - - - - - 0.836 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
40. C11H16ORF80 C11H16ORF80 18673 0.836 - - - - - - 0.836 - - -
41. NUP85 ENSGALG00000007974 21249 0.835 - - - - - - 0.835 - - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
42. EWSR1 ENSGALG00000008149 13014 0.832 - - - - - - 0.832 - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
43. DKC1 ENSGALG00000005054 30350 0.831 - - - - - - 0.831 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
44. LSM5 ENSGALG00000041625 22307 0.83 - - - - - - 0.830 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
45. VATB VATB 13756 0.829 - - - - - - 0.829 - - -
46. UQCR10 ENSGALG00000008066 52968 0.829 - - - - - - 0.829 - - - ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
47. TXNDC17 ENSGALG00000027950 45004 0.829 - - - - - - 0.829 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
48. PDCD10 ENSGALG00000009477 7061 0.827 - - - - - - 0.827 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
49. EIF3B ENSGALG00000040999 49971 0.827 - - - - - - 0.827 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
50. YWHAZ ENSGALG00000031387 84985 0.826 - - - - - - 0.826 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
51. API5 ENSGALG00000037968 18265 0.826 - - - - - - 0.826 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
52. ASUN ASUN 17129 0.825 - - - - - - 0.825 - - -
53. FBXO5 ENSGALG00000013607 6156 0.824 - - - - - - 0.824 - - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
54. CDC7 ENSGALG00000006051 3996 0.824 - - - - - - 0.824 - - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
55. KPNA3 ENSGALG00000017009 17330 0.823 - - - - - - 0.823 - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
56. SENP6 ENSGALG00000015901 8013 0.823 - - - - - - 0.823 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
57. SVIL ENSGALG00000007331 12032 0.821 - - - - - - 0.821 - - - supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
58. PPIH ENSGALG00000004874 25558 0.821 - - - - - - 0.821 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
59. AZIN1 ENSGALG00000029295 11085 0.82 - - - - - - 0.820 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
60. SRI ENSGALG00000008985 13865 0.82 - - - - - - 0.820 - - - sorcin [Source:NCBI gene;Acc:420538]
61. DNAJC3 ENSGALG00000016894 9048 0.819 - - - - - - 0.819 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
62. GLI2 ENSGALG00000011630 3347 0.819 - - - - - - 0.819 - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
63. RPL36AL ENSGALG00000004952 205590 0.819 - - - - - - 0.819 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
64. C1H12ORF23 C1H12ORF23 13234 0.819 - - - - - - 0.819 - - -
65. RABGGTB ENSGALG00000011388 11654 0.817 - - - - - - 0.817 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
66. MRPL30 ENSGALG00000016760 16965 0.817 - - - - - - 0.817 - - - mitochondrial ribosomal protein L30
67. SREK1IP1 ENSGALG00000026028 5756 0.816 - - - - - - 0.816 - - - SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
68. MZT1 ENSGALG00000016932 9269 0.816 - - - - - - 0.816 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
69. CDK5RAP1 ENSGALG00000006738 2628 0.815 - - - - - - 0.815 - - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
70. KIF15 ENSGALG00000036645 9946 0.814 - - - - - - - 0.814 - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
71. TNRC6A ENSGALG00000006068 9166 0.814 - - - - - - 0.814 - - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
72. CHMP6 ENSGALG00000026428 18026 0.814 - - - - - - 0.814 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
73. MORF4L1 ENSGALG00000008146 29940 0.814 - - - - - - 0.814 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
74. CTSL2 CTSL2 7966 0.814 - - - - - - 0.814 - - -
75. BPNT1 ENSGALG00000009576 7445 0.813 - - - - - - 0.813 - - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
76. TXN2 ENSGALG00000012532 12518 0.812 - - - - - - 0.812 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
77. SEC11A ENSGALG00000037553 32123 0.812 - - - - - - 0.812 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
78. NDUFB3 ENSGALG00000008239 15511 0.811 - - - - - - 0.811 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
79. CCNH ENSGALG00000015641 8051 0.809 - - - - - - 0.809 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
80. COBRA1 COBRA1 4600 0.806 - - - - - - 0.806 - - -
81. PRTG ENSGALG00000037336 34665 0.806 - - - - - - 0.806 - - - protogenin [Source:NCBI gene;Acc:415407]
82. PDIA4 ENSGALG00000043006 22992 0.806 - - - - - - 0.806 - - - protein disulfide isomerase family A member 4 [Source:NCBI gene;Acc:420785]
83. ATG5 ENSGALG00000015387 7752 0.806 - - - - - - 0.806 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
84. ENSGALG00000016887 ENSGALG00000016887 20086 0.806 - - - - - - 0.806 - - -
85. LLPH ENSGALG00000019358 20976 0.805 - - - - - - 0.805 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
86. SNAPC5 ENSGALG00000007695 4117 0.805 - - - - - - 0.805 - - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
87. R3HDM1 ENSGALG00000012246 6580 0.804 - - - - - - 0.804 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
88. USP14 ENSGALG00000014920 18778 0.804 - - - - - - 0.804 - - - ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
89. ULK2 ENSGALG00000004727 10729 0.804 - - - - - - 0.804 - - - unc-51 like autophagy activating kinase 2 [Source:HGNC Symbol;Acc:HGNC:13480]
90. CENPH ENSGALG00000014788 10601 0.803 - - 0.803 - - - - - - - centromere protein H [Source:NCBI gene;Acc:395316]
91. METTL23 ENSGALG00000001790 7906 0.803 - - - - - - 0.803 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
92. ENSGALG00000006463 ENSGALG00000006463 45151 0.802 - - - - - - 0.802 - - -
93. TMEM126A ENSGALG00000014066 6149 0.801 - - - - - - 0.801 - - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
94. SOD1 ENSGALG00000015844 35836 0.801 - - - - - - 0.801 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
95. CHTF8 ENSGALG00000000632 7230 0.8 - - - - - - 0.800 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
96. TERF2 ENSGALG00000000657 7865 0.799 - - - - - - 0.799 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
97. TMED7 ENSGALG00000028484 21008 0.799 - - - - - - 0.799 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
98. RFC1 ENSGALG00000014298 6516 0.798 - - - - - - 0.798 - - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
99. RANGAP1 ENSGALG00000011966 20170 0.797 - - - - - - 0.797 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
100. WBSCR22 6082 0.797 - - - - - - 0.797 - - - Williams-Beuren syndrome chromosome region 22

There are 647 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA