Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
4. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
5. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
6. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
7. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
12. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
13. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
14. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
15. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
16. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
17. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
18. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
19. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
20. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
21. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
22. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. B2M ENSGALG00000002160 4 0.768 - - - - - - - 0.768 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
27. ENSGALG00000001345 ENSGALG00000001345 5 0.768 - - - - - - - 0.768 - -
28. ENSGALG00000028964 ENSGALG00000028964 46 0.768 - - - - - - - 0.768 - -
29. FHDC1 ENSGALG00000041054 34 0.768 - - - - - - - 0.768 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
30. AOC1 13 0.768 - - - - - - - 0.768 - - amine oxidase, copper containing 1, transcript variant X2
31. CREB3 ENSGALG00000002523 23 0.768 - - - - - - - 0.768 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
32. SLC6A6 ENSGALG00000006425 31 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
33. PPP1R1B ENSGALG00000044406 6 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
34. gga-mir-218-1 ENSGALG00000018327 3 0.768 - - - - - - - 0.768 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
35. SKI ENSGALG00000001229 50 0.768 - - - - - - - 0.768 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
36. GDPD4 ENSGALG00000000690 824 0.768 - - - - - - - 0.768 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
37. MPV17L2 ENSGALG00000041429 168 0.768 - - - - - - - 0.768 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
38. CBR4 ENSGALG00000009714 7 0.768 - - - - - - - 0.768 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
39. SPG20 22 0.768 - - - - - - - 0.768 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
40. KLHL40 ENSGALG00000005292 61 0.768 - - - - - - - 0.768 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
41. KIAA0319L ENSGALG00000002445 75 0.768 - - - - - - - 0.768 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
42. MICALL2 ENSGALG00000004070 23 0.768 - - - - - - - 0.768 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
43. OSBPL3 ENSGALG00000011007 23 0.768 - - - - - - - 0.768 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
44. ROS1 ENSGALG00000014913 7 0.768 - - - - - - - 0.768 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
45. OTX2 ENSGALG00000034889 8 0.768 - - - - - - - 0.768 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
46. ID3 ENSGALG00000035317 52 0.768 - - - - - - - 0.768 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
47. PBEF1 PBEF1 25 0.768 - - - - - - - 0.768 - -
48. PPIL6 ENSGALG00000015237 11 0.768 - - - - - - - 0.768 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
49. PTPRO ENSGALG00000013085 26 0.768 - - - - - - - 0.768 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
50. VIT ENSGALG00000010583 16 0.768 - - - - - - - 0.768 - - vitrin [Source:NCBI gene;Acc:421471]
51. CYP7B1 ENSGALG00000029435 3 0.768 - - - - - - - 0.768 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
52. KNDC1 ENSGALG00000007007 31 0.768 - - - - - - - 0.768 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
53. MMP11 ENSGALG00000005968 3 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
54. ENSGALG00000010218 ENSGALG00000010218 12 0.768 - - - - - - - 0.768 - -
55. ANKRD31 46 0.768 - - - - - - - 0.768 - - ankyrin repeat domain 31, transcript variant X2
56. RMST RMST 2 0.768 - - - - - - - 0.768 - -
57. ADCY7 ENSGALG00000003837 10 0.768 - - - - - - - 0.768 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
58. ALG12 ENSGALG00000008539 20 0.768 - - - - - - - 0.768 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
59. RBM15 ENSGALG00000000401 22 0.768 - - - - - - - 0.768 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
60. ADCY1 ENSGALG00000031170 4 0.768 - - - - - - - 0.768 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
61. HLCS ENSGALG00000016047 30 0.768 - - - - - - - 0.768 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
62. TNMD ENSGALG00000006821 19 0.768 - - - - - - - 0.768 - - tenomodulin [Source:NCBI gene;Acc:404530]
63. BTBD10 ENSGALG00000005369 56 0.768 - - - - - - - 0.768 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
64. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
65. RBKS ENSGALG00000010043 3 0.768 - - - - - - - 0.768 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
66. RAI1 ENSGALG00000004888 14 0.768 - - - - - - - 0.768 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
67. ATXN10 ENSGALG00000014234 16 0.768 - - - - - - - 0.768 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
68. CD40 ENSGALG00000007015 7 0.768 - - - - - - - 0.768 - - CD40 molecule [Source:NCBI gene;Acc:395385]
69. SLC20A1 ENSGALG00000013740 40 0.768 - - - - - - - 0.768 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
70. SNORA26 SNORA26 3 0.768 - - - - - - - 0.768 - -
71. IL8 ENSGALG00000026098 16 0.768 - - - - - - - 0.768 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
72. SPIDR SPIDR 19 0.768 - - - - - - - 0.768 - -
73. SPINK6 ENSGALG00000032567 3 0.768 - - - - - - - 0.768 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
74. TANC2 26 0.768 - - - - - - - 0.768 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
75. SLC6A20 ENSGALG00000039333 1 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
76. gga-mir-6569 ENSGALG00000026551 10 0.768 - - - - - - - 0.768 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
77. DMGDH ENSGALG00000004491 15 0.768 - - - - - - - 0.768 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
78. FLT4 ENSGALG00000005802 5 0.768 - - - - - - - 0.768 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
79. SUSD5 ENSGALG00000042289 1 0.768 - - - - - - - 0.768 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
80. PHC2 62 0.768 - - - - - - - 0.768 - - polyhomeotic homolog 2
81. NMNAT3 ENSGALG00000026187 11 0.768 - - - - - - - 0.768 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
82. CBX2 ENSGALG00000023338 10 0.768 - - - - - - - 0.768 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
83. RBMS3 ENSGALG00000011439 25 0.768 - - - - - - - 0.768 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
84. PEX5 ENSGALG00000014683 17 0.768 - - - - - - - 0.768 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
85. FOXG1 ENSGALG00000036364 29 0.768 - - - - - - - 0.768 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
86. SCN4B ENSGALG00000007409 22 0.768 - - - - - - - 0.768 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
87. ENSGALG00000017391 ENSGALG00000017391 12 0.768 - - - - - - - 0.768 - -
88. DENND5A ENSGALG00000005840 54 0.768 - - - - - - - 0.768 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
89. PPP1R36 ENSGALG00000040026 24 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
90. PYROXD2 ENSGALG00000007014 14 0.768 - - - - - - - 0.768 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
91. TMSB10 TMSB10 518 0.768 - - - - - - - 0.768 - -
92. ENSGALG00000026925 ENSGALG00000026925 119 0.768 - - - - - - - 0.768 - -
93. LOC100857820 ENSGALG00000001824 16 0.768 - - - - - - - 0.768 - - uncharacterized LOC100857820
94. CREB3L1 ENSGALG00000008393 3 0.768 - - - - - - - 0.768 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
95. MEIOB ENSGALG00000005411 6 0.768 - - - - - - - 0.768 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
96. LAMC1 ENSGALG00000004620 11 0.768 - - - - - - - 0.768 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
97. ING1 ENSGALG00000016849 89 0.768 - - - - - - - 0.768 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
98. RASSF6 ENSGALG00000011664 7 0.768 - - - - - - - 0.768 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
99. COG3 ENSGALG00000016980 15 0.768 - - - - - - - 0.768 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
100. SEC16B ENSGALG00000004424 4 0.768 - - - - - - - 0.768 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA